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A6VWP5 (A6VWP5_MARMS) Unreviewed, UniProtKB/TrEMBL

Last modified May 1, 2013. Version 31. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesRecommended name:
Probable phosphoketolase HAMAP-Rule MF_01403
EC=4.1.2.- HAMAP-Rule MF_01403
Gene names
Ordered Locus Names:Mmwyl1_1950
OrganismMarinomonas sp. (strain MWYL1) [Complete proteome] [HAMAP] EMBL ABR70874.1
Taxonomic identifier400668 [NCBI]
Taxonomic lineageBacteria › Proteobacteria › Gammaproteobacteria › Oceanospirillales › Marinomonas

Protein attributes

Sequence length797 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Cofactor

Thiamine pyrophosphate By similarity. HAMAP-Rule MF_01403

Sequence similarities

Belongs to the XFP family. HAMAP-Rule MF_01403

Ontologies

Keywords
   LigandThiamine pyrophosphate HAMAP-Rule MF_01403
   Molecular functionLyase HAMAP-Rule MF_01403 EMBL ABR70874.1
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processcarbohydrate metabolic process

Inferred from electronic annotation. Source: InterPro

   Molecular_functionaldehyde-lyase activity

Inferred from electronic annotation. Source: HAMAP

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
A6VWP5 [UniParc].

Last modified August 21, 2007. Version 1.
Checksum: 5ED79A1E67100AEC

FASTA79789,963
        10         20         30         40         50         60 
MPKTTMQTAA LAPDQLSLID RYWRASNYLS VGQIYLHDNP LLSRPLVLAD IKRILLGHWG 

        70         80         90        100        110        120 
TTPGQNFIYV HLNRIIKQYD LSMIYISGPG HGGPAVVSNT YLEGSYSEIY PDISQDTVGL 

       130        140        150        160        170        180 
QKLFKQFSFP GGIPSHASPE CPGSIHEGGE LGYSLSHAFG AVFDNPELIA ACVVGDGEAE 

       190        200        210        220        230        240 
TGPLATAWHS NKFLNPITDG VVLPILHLNG YKIANPTVLA RISHQELEQL FRGYGWHPIF 

       250        260        270        280        290        300 
VEGSDPDYMH KAMATALDFA VREIKAIKLN AQENRVFERP RWPMIILKSP KGWTGPKIVD 

       310        320        330        340        350        360 
GVQIEGTFHA HQVPISNPES KPEHLPLIEE WLRSYRPQEL FDSNGRLLPE LVELAPKGER 

       370        380        390        400        410        420 
RMGANPHANG GLLLKPLQMP DFRDYACTVP KHGVRGVGDT HVLGPFVRDV VKLNQENFRV 

       430        440        450        460        470        480 
FGPDETISNG LEAVFETTNR QWEATTKIND EYLAPNGRVM EMLSEHQCQG WLEGYLLTGR 

       490        500        510        520        530        540 
HGLFNCYEAF IHIVDSMFNQ HAKWLKVTAG LSWRPKIASL NYLLASHVWR QDHNGFTHQD 

       550        560        570        580        590        600 
PGFIDHVVNK KADIVRVYLP PDANCLLSVM DHCLRSKHYV NVVVAGKHPA PQWLDMDAAA 

       610        620        630        640        650        660 
KHCAAGIGIW QWASNDTGLN QHDQTDVVMA CCGDVPTLET LAAVSILREH LPTLNIRVVN 

       670        680        690        700        710        720 
VVDLMKLQPQ TEHPHGLNDA EFDFLFTENK PVIFAFHTYP SLIHKLTYRR TNHRNIHVRG 

       730        740        750        760        770        780 
YKEEGTITTA FDMTVLNDMD RFHLVMDVID RLPQTGVKGV ELKRMLSEKL IEHRQYINEY 

       790 
GVDMPEIRDW KWSNKDE

« Hide

References

[1]"Complete sequence of Marinomonas sp. MWYL1."
US DOE Joint Genome Institute
Copeland A., Lucas S., Lapidus A., Barry K., Glavina del Rio T., Dalin E., Tice H., Pitluck S., Kiss H., Brettin T., Bruce D., Detter J.C., Han C., Schmutz J., Larimer F., Land M., Hauser L., Kyrpides N. expand/collapse author list , Kim E., Johnston A.W.B., Todd J.D., Rogers R., Wexler M., Bond P.L., Li Y., Richardson P.
Submitted (JUN-2007) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: MWYL1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CP000749 Genomic DNA. Translation: ABR70874.1.
RefSeqYP_001340809.1. NC_009654.1.

3D structure databases

ModBaseSearch...

Protein-protein interaction databases

STRING400668.Mmwyl1_1950.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaABR70874; ABR70874; Mmwyl1_1950.
GeneID5367742.
KEGGmmw:Mmwyl1_1950.
PATRIC22467263. VBIMarSp124341_2019.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG3957.
HOGENOMHOG000236450.
OMADMTVLND.
ProtClustDBPRK05261.

Enzyme and pathway databases

BioCycMSP400668:GHKD-2061-MONOMER.

Family and domain databases

HAMAPMF_01403. Phosphoketolase.
InterProIPR023962. Phosphoketolase.
IPR009014. Transketo_C/Pyr-ferredox_oxred.
IPR005593. Xul5P/Fru6P_PKetolase.
IPR018969. Xul5P/Fru6P_PKetolase_C.
IPR019790. Xul5P/Fru6P_PKetolase_CS.
IPR018970. Xul5P/Fru6P_PKetolase_N.
IPR019789. Xul5P/Fru6P_PKetolase_ThDP_BS.
[Graphical view]
PfamPF03894. XFP. 1 hit.
PF09363. XFP_C. 1 hit.
PF09364. XFP_N. 1 hit.
[Graphical view]
PIRSFPIRSF017245. Phosphoketolase. 1 hit.
SUPFAMSSF52922. Transketo_C_like. 1 hit.
PROSITEPS60002. PHOSPHOKETOLASE_1. 1 hit.
PS60003. PHOSPHOKETOLASE_2. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameA6VWP5_MARMS
AccessionPrimary (citable) accession number: A6VWP5
Entry history
Integrated into UniProtKB/TrEMBL: August 21, 2007
Last sequence update: August 21, 2007
Last modified: May 1, 2013
This is version 31 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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