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Protein
Submitted name:

Oligogalacturonide lyase

Gene

Asuc_1467

Organism
Actinobacillus succinogenes (strain ATCC 55618 / 130Z)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

LyaseImported

Protein family/group databases

CAZyiPL22. Polysaccharide Lyase Family 22.

Names & Taxonomyi

Protein namesi
Submitted name:
Oligogalacturonide lyaseImported (EC:4.2.2.6Imported)
Gene namesi
Ordered Locus Names:Asuc_1467Imported
OrganismiActinobacillus succinogenes (strain ATCC 55618 / 130Z)Imported
Taxonomic identifieri339671 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaPasteurellalesPasteurellaceaeActinobacillus
Proteomesi
  • UP000001114 Componenti: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi339671.Asuc_1467.

Structurei

3D structure databases

ProteinModelPortaliA6VPC9.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini1 – 383Pectate_lyase22InterPro annotationAdd BLAST383

Phylogenomic databases

eggNOGiENOG4105CAZ. Bacteria.
COG0823. LUCA.
HOGENOMiHOG000219311.
KOiK01730.
OMAiHLMSNFD.
OrthoDBiPOG091H0XA8.

Family and domain databases

Gene3Di2.130.10.10. 1 hit.
InterProiIPR027946. Ogl_dom.
IPR015943. WD40/YVTN_repeat-like_dom.
[Graphical view]
PfamiPF14583. Pectate_lyase22. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

A6VPC9-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MAKGKKIQLT FESFVDSDTN VKVTRLTPKE VICHRNYFYQ KCFTQDGNKL
60 70 80 90 100
LFAGDFDGNR NYYLLDLQTQ EATQLTEGKG DNTFGGFISH DDKSFFYVKN
110 120 130 140 150
ESSLRKVNLE TLEEKVIYTV DENWKGYGTW VANSDCTKLV GIEILKSCWQ
160 170 180 190 200
PLTDWDKFKA FYHTNPTCRL IKVDILTGEL EVVLQDNAWL GHPTYRPFDD
210 220 230 240 250
SIIGFCHEGP HDLVDARMWF VNEDGTNVRK AKEHQTGESC THEFWVPDGS
260 270 280 290 300
KMIYVSYFKD QTERVIYSID PNTLENTRLI TMPPCSHLMS NFNGNLLVGD
310 320 330 340 350
GCDSPVDVAD SDSYNIENDP FLYLFDIGKQ RITKLAKHSS SWKVLDGDRQ
360 370 380
ITHPHPSFTP DDSAVLFGSD FEGKPAIYLA DISALEA
Length:387
Mass (Da):44,140
Last modified:August 21, 2007 - v1
Checksum:iC82796FDDC22F6B1
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000746 Genomic DNA. Translation: ABR74826.1.
RefSeqiWP_012073203.1. NC_009655.1.

Genome annotation databases

EnsemblBacteriaiABR74826; ABR74826; Asuc_1467.
KEGGiasu:Asuc_1467.
PATRICi20761314. VBIActSuc117883_1532.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000746 Genomic DNA. Translation: ABR74826.1.
RefSeqiWP_012073203.1. NC_009655.1.

3D structure databases

ProteinModelPortaliA6VPC9.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi339671.Asuc_1467.

Protein family/group databases

CAZyiPL22. Polysaccharide Lyase Family 22.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiABR74826; ABR74826; Asuc_1467.
KEGGiasu:Asuc_1467.
PATRICi20761314. VBIActSuc117883_1532.

Phylogenomic databases

eggNOGiENOG4105CAZ. Bacteria.
COG0823. LUCA.
HOGENOMiHOG000219311.
KOiK01730.
OMAiHLMSNFD.
OrthoDBiPOG091H0XA8.

Family and domain databases

Gene3Di2.130.10.10. 1 hit.
InterProiIPR027946. Ogl_dom.
IPR015943. WD40/YVTN_repeat-like_dom.
[Graphical view]
PfamiPF14583. Pectate_lyase22. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiA6VPC9_ACTSZ
AccessioniPrimary (citable) accession number: A6VPC9
Entry historyi
Integrated into UniProtKB/TrEMBL: August 21, 2007
Last sequence update: August 21, 2007
Last modified: November 2, 2016
This is version 49 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.