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A6VMP5

- DCD_ACTSZ

UniProt

A6VMP5 - DCD_ACTSZ

Protein

Deoxycytidine triphosphate deaminase

Gene

dcd

Organism
Actinobacillus succinogenes (strain ATCC 55618 / 130Z)
Status
Reviewed - Annotation score: 2 out of 5- Protein inferred from homologyi
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    • History
      Entry version 48 (01 Oct 2014)
      Sequence version 1 (21 Aug 2007)
      Previous versions | rss
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    Functioni

    Catalytic activityi

    dCTP + H2O = dUTP + NH3.UniRule annotation

    Pathwayi

    GO - Molecular functioni

    1. dCTP deaminase activity Source: UniProtKB-HAMAP

    GO - Biological processi

    1. dUMP biosynthetic process Source: UniProtKB-UniPathway
    2. dUTP biosynthetic process Source: InterPro
    3. pyrimidine ribonucleotide biosynthetic process Source: UniProtKB-HAMAP

    Keywords - Molecular functioni

    Hydrolase

    Keywords - Biological processi

    Nucleotide metabolism

    Enzyme and pathway databases

    BioCyciASUC339671:GHDX-910-MONOMER.
    UniPathwayiUPA00610; UER00665.

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Deoxycytidine triphosphate deaminaseUniRule annotation (EC:3.5.4.13UniRule annotation)
    Short name:
    dCTP deaminaseUniRule annotation
    Gene namesi
    Name:dcdUniRule annotation
    Ordered Locus Names:Asuc_0872
    OrganismiActinobacillus succinogenes (strain ATCC 55618 / 130Z)
    Taxonomic identifieri339671 [NCBI]
    Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaPasteurellalesPasteurellaceaeActinobacillus
    ProteomesiUP000001114: Chromosome

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Chaini1 – 194194Deoxycytidine triphosphate deaminasePRO_1000071475Add
    BLAST

    Interactioni

    Protein-protein interaction databases

    STRINGi339671.Asuc_0872.

    Structurei

    3D structure databases

    ProteinModelPortaliA6VMP5.
    SMRiA6VMP5. Positions 1-193.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the dCTP deaminase family.UniRule annotation

    Phylogenomic databases

    eggNOGiCOG0717.
    HOGENOMiHOG000228601.
    KOiK01494.
    OMAiRPGMMIG.
    OrthoDBiEOG67DPKR.

    Family and domain databases

    Gene3Di2.70.40.10. 1 hit.
    HAMAPiMF_00146. dCTP_deaminase.
    InterProiIPR011962. dCTP_deam.
    IPR010550. dCTP_deam_bac.
    IPR029054. dUTPase-like.
    [Graphical view]
    PfamiPF06559. DCD. 1 hit.
    [Graphical view]
    SUPFAMiSSF51283. SSF51283. 1 hit.
    TIGRFAMsiTIGR02274. dCTP_deam. 1 hit.

    Sequencei

    Sequence statusi: Complete.

    A6VMP5-1 [UniParc]FASTAAdd to Basket

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    MRLCDTDIEK HLDEGIITIS PRPDNGKING ATIDLRLGNS FRVFREHSAP    50
    YIDVSGPKEA VAEQLERVMS DEIIVADNEA FFLHPGVLAL ATTLESVKLP 100
    ADIIGWLDGR SSLARLGLMV HVTAHRIDPG WEGKIVLEFY NSGKLPLALR 150
    PNMIIGALSF EVLSGPAARP YNSRQDAKYK NQQSAVASRI NQDR 194
    Length:194
    Mass (Da):21,400
    Last modified:August 21, 2007 - v1
    Checksum:iB8DD4987E5BA4C29
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP000746 Genomic DNA. Translation: ABR74242.1.
    RefSeqiWP_012072620.1. NC_009655.1.
    YP_001344177.1. NC_009655.1.

    Genome annotation databases

    EnsemblBacteriaiABR74242; ABR74242; Asuc_0872.
    GeneIDi5348582.
    KEGGiasu:Asuc_0872.
    PATRICi20760032. VBIActSuc117883_0920.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP000746 Genomic DNA. Translation: ABR74242.1 .
    RefSeqi WP_012072620.1. NC_009655.1.
    YP_001344177.1. NC_009655.1.

    3D structure databases

    ProteinModelPortali A6VMP5.
    SMRi A6VMP5. Positions 1-193.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 339671.Asuc_0872.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai ABR74242 ; ABR74242 ; Asuc_0872 .
    GeneIDi 5348582.
    KEGGi asu:Asuc_0872.
    PATRICi 20760032. VBIActSuc117883_0920.

    Phylogenomic databases

    eggNOGi COG0717.
    HOGENOMi HOG000228601.
    KOi K01494.
    OMAi RPGMMIG.
    OrthoDBi EOG67DPKR.

    Enzyme and pathway databases

    UniPathwayi UPA00610 ; UER00665 .
    BioCyci ASUC339671:GHDX-910-MONOMER.

    Family and domain databases

    Gene3Di 2.70.40.10. 1 hit.
    HAMAPi MF_00146. dCTP_deaminase.
    InterProi IPR011962. dCTP_deam.
    IPR010550. dCTP_deam_bac.
    IPR029054. dUTPase-like.
    [Graphical view ]
    Pfami PF06559. DCD. 1 hit.
    [Graphical view ]
    SUPFAMi SSF51283. SSF51283. 1 hit.
    TIGRFAMsi TIGR02274. dCTP_deam. 1 hit.
    ProtoNeti Search...

    Publicationsi

    1. "A genomic perspective on the potential of Actinobacillus succinogenes for industrial succinate production."
      McKinlay J.B., Laivenieks M., Schindler B.D., McKinlay A.A., Siddaramappa S., Challacombe J.F., Lowry S.R., Clum A., Lapidus A.L., Burkhart K.B., Harkins V., Vieille C.
      BMC Genomics 11:680-680(2010) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: ATCC 55618 / 130Z.

    Entry informationi

    Entry nameiDCD_ACTSZ
    AccessioniPrimary (citable) accession number: A6VMP5
    Entry historyi
    Integrated into UniProtKB/Swiss-Prot: February 26, 2008
    Last sequence update: August 21, 2007
    Last modified: October 1, 2014
    This is version 48 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiReviewed (UniProtKB/Swiss-Prot)
    Annotation programProkaryotic Protein Annotation Program

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteome

    Documents

    1. PATHWAY comments
      Index of metabolic and biosynthesis pathways
    2. SIMILARITY comments
      Index of protein domains and families

    External Data

    Dasty 3