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A6VL46

- A6VL46_ACTSZ

UniProt

A6VL46 - A6VL46_ACTSZ

Protein
Submitted name:

Alpha amylase catalytic region

Gene

Asuc_0315

Organism
Actinobacillus succinogenes (strain ATCC 55618 / 130Z)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi
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    • History
      Entry version 42 (01 Oct 2014)
      Sequence version 1 (21 Aug 2007)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. alpha-amylase activity Source: InterPro
    2. calcium ion binding Source: InterPro

    GO - Biological processi

    1. alpha-glucan catabolic process Source: InterPro
    2. cellular oligosaccharide catabolic process Source: InterPro

    Enzyme and pathway databases

    BioCyciASUC339671:GHDX-333-MONOMER.

    Protein family/group databases

    CAZyiGH13. Glycoside Hydrolase Family 13.

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    Alpha amylase catalytic regionImported
    Gene namesi
    Ordered Locus Names:Asuc_0315Imported
    OrganismiActinobacillus succinogenes (strain ATCC 55618 / 130Z)Imported
    Taxonomic identifieri339671 [NCBI]
    Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaPasteurellalesPasteurellaceaeActinobacillus
    ProteomesiUP000001114: Chromosome

    Subcellular locationi

    GO - Cellular componenti

    1. periplasmic space Source: InterPro

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Signal peptidei1 – 1919 PotentialImportedAdd
    BLAST
    Chaini20 – 685666 PotentialImportedPRO_5000258695Add
    BLAST

    Interactioni

    Protein-protein interaction databases

    STRINGi339671.Asuc_0315.

    Structurei

    3D structure databases

    ProteinModelPortaliA6VL46.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Keywords - Domaini

    SignalImported

    Phylogenomic databases

    eggNOGiCOG0366.
    HOGENOMiHOG000273912.
    KOiK01176.
    OMAiGQNWHSF.
    OrthoDBiEOG65QWH3.

    Family and domain databases

    Gene3Di3.20.20.80. 1 hit.
    InterProiIPR014635. A_amylase_MalS.
    IPR015902. Glyco_hydro_13.
    IPR006047. Glyco_hydro_13_cat_dom.
    IPR006589. Glyco_hydro_13_sub_cat_dom.
    IPR013781. Glyco_hydro_catalytic_dom.
    IPR017853. Glycoside_hydrolase_SF.
    [Graphical view]
    PANTHERiPTHR10357. PTHR10357. 1 hit.
    PfamiPF00128. Alpha-amylase. 1 hit.
    [Graphical view]
    PIRSFiPIRSF036917. Alph_amls_MalS. 1 hit.
    SMARTiSM00642. Aamy. 1 hit.
    [Graphical view]
    SUPFAMiSSF51445. SSF51445. 2 hits.

    Sequencei

    Sequence statusi: Complete.

    Sequence processingi: The displayed sequence is further processed into a mature form.

    A6VL46-1 [UniParc]FASTAAdd to Basket

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    MKKSLLYFCL FTSSVSFAQG WQHTHFRYFN DSAETNLFQS QTALEKGYYP    50
    LTFIFDNQCY QPQSAMKLNQ TVSLIPCFGE APHIRLFRRG NYIAQIDMRS 100
    GTPTLKIGVQ QQQSSDKNAL KSCPRWNKQP IEIDVSSTFA EGESVRDFYS 150
    NQIAEVKNGK VIMMPAANAD GLILLEKSAV EKTDVFDWKN ATVYFVLTDR 200
    FHNGNPANDN SYGRHKDGMQ EIGTFHGGDL QGLTEKLDYL QQLGVNALWI 250
    SSPLEQMHGW VGGGNKGDFP HYGYHGYYHL DWTKLDANMG TESDLRNLIQ 300
    QAHRRGIRVL FDIVMNHTGY ATLADMQEFK FGDFYLKPEE ITAVLGEKWT 350
    NWQPEKGQNW HSFNDFIKFG DSKAWQNWWG KDWVRADIGD YDSPKFDDLR 400
    MSLSALPDLK TESESAVELP RFFQHKNTNA KKLDNAKVRD YLIVWLTDWV 450
    RRYGVDGFRV DTAKHVEKST WLALKQASQR ALKEWQQKNP KESFGDDFWM 500
    TGEAWGHGVF KSDYYQNGFD AMINFDFQDQ AKNALDCFAR IEPVYQEMNN 550
    KLKDFNVLSY LSSHDTRLFF HSDSERNVAK QKIAANLLLL SSGAVQIYYG 600
    DESGREFGAT GSDPVQGTRS DMNWTDLQKD RSKQALHQHW QKLAQFRQRH 650
    QAVGAGVHQT LKSESYFAFS RTLGEDKVMV VWAGN 685
    Length:685
    Mass (Da):78,800
    Last modified:August 21, 2007 - v1
    Checksum:iF4825B25B3264E76
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP000746 Genomic DNA. Translation: ABR73693.1.
    RefSeqiYP_001343628.1. NC_009655.1.

    Genome annotation databases

    EnsemblBacteriaiABR73693; ABR73693; Asuc_0315.
    GeneIDi5348857.
    KEGGiasu:Asuc_0315.
    PATRICi20758834. VBIActSuc117883_0341.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP000746 Genomic DNA. Translation: ABR73693.1 .
    RefSeqi YP_001343628.1. NC_009655.1.

    3D structure databases

    ProteinModelPortali A6VL46.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 339671.Asuc_0315.

    Protein family/group databases

    CAZyi GH13. Glycoside Hydrolase Family 13.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai ABR73693 ; ABR73693 ; Asuc_0315 .
    GeneIDi 5348857.
    KEGGi asu:Asuc_0315.
    PATRICi 20758834. VBIActSuc117883_0341.

    Phylogenomic databases

    eggNOGi COG0366.
    HOGENOMi HOG000273912.
    KOi K01176.
    OMAi GQNWHSF.
    OrthoDBi EOG65QWH3.

    Enzyme and pathway databases

    BioCyci ASUC339671:GHDX-333-MONOMER.

    Family and domain databases

    Gene3Di 3.20.20.80. 1 hit.
    InterProi IPR014635. A_amylase_MalS.
    IPR015902. Glyco_hydro_13.
    IPR006047. Glyco_hydro_13_cat_dom.
    IPR006589. Glyco_hydro_13_sub_cat_dom.
    IPR013781. Glyco_hydro_catalytic_dom.
    IPR017853. Glycoside_hydrolase_SF.
    [Graphical view ]
    PANTHERi PTHR10357. PTHR10357. 1 hit.
    Pfami PF00128. Alpha-amylase. 1 hit.
    [Graphical view ]
    PIRSFi PIRSF036917. Alph_amls_MalS. 1 hit.
    SMARTi SM00642. Aamy. 1 hit.
    [Graphical view ]
    SUPFAMi SSF51445. SSF51445. 2 hits.
    ProtoNeti Search...

    Publicationsi

    1. "A genomic perspective on the potential of Actinobacillus succinogenes for industrial succinate production."
      McKinlay J.B., Laivenieks M., Schindler B.D., McKinlay A.A., Siddaramappa S., Challacombe J.F., Lowry S.R., Clum A., Lapidus A.L., Burkhart K.B., Harkins V., Vieille C.
      BMC Genomics 11:680-680(2010) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: ATCC 55618 / 130ZImported.

    Entry informationi

    Entry nameiA6VL46_ACTSZ
    AccessioniPrimary (citable) accession number: A6VL46
    Entry historyi
    Integrated into UniProtKB/TrEMBL: August 21, 2007
    Last sequence update: August 21, 2007
    Last modified: October 1, 2014
    This is version 42 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3