A6VI81 (A6VI81_METM7) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
RNA polymerase Rpb4 EMBL ABR66157.1

Gene names

Ordered Locus Names:

MmarC7_1091

Organism

Methanococcus maripaludis (strain C7 / ATCC BAA-1331) [Complete proteome] [HAMAP]

Taxonomic identifier

426368 [NCBI]

Taxonomic lineage

Archaea › Euryarchaeota › Methanococci › Methanococcales › Methanococcaceae › Methanococcus

Protein attributes

Sequence length	107 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Technical term	Complete proteome
Gene Ontology (GO)
Molecular function	DNA-directed RNA polymerase activity Inferred from electronic annotation. Source: InterPro nucleotide binding Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	A6VI81 [UniParc]. Last modified August 21, 2007. Version 1. Checksum: 8901E56A473C7762	FASTA	107	12,355
	10 20 30 40 50 60 MIGKEIISEK YTTIAHATEI MDERAGFDEL SYEHGCSLDY LRKFSTISKE DADTMFEQLT 70 80 90 100 NLGLTEKMAV KIIDLLPETE EDLKIIFYRV DVPENKDDIL EVVSKFK

References

[1]

"Complete sequence of Methanococcus maripaludis C7." Copeland A., Lucas S., Lapidus A., Barry K., Glavina del Rio T., Dalin E., Tice H., Pitluck S., Clum A., Schmutz J., Larimer F., Land M., Hauser L., Kyrpides N., Anderson I., Sieprawska-Lupa M., Whitman W.B., Richardson P. Submitted (JUN-2007) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: C7 / ATCC BAA-1331.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000745 Genomic DNA. Translation: ABR66157.1.
RefSeq	YP_001330308.1. NC_009637.1.
3D structure databases
ProteinModelPortal	A6VI81.
SMR	A6VI81. Positions 1-106.
ModBase	Search...
Protein-protein interaction databases
STRING	A6VI81.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	5329365.
GenomeReviews	Gene locus MmarC7_1091 in contig CP000745_GR.
KEGG	mmz:MmarC7_1091.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	arNOG11677.
HOGENOM	HBG321515.
OMA	CALDYLQ.
ProtClustDB	PRK14981.
Family and domain databases
InterPro	IPR010997. HRDC-like. IPR015906. HRDC-like_sub1. IPR015907. HRDC-like_sub2. IPR010924. RNA_pol_F_arc. IPR005574. RNA_pol_II_Rpb4. [Graphical view]
Gene3D	G3DSA:1.10.150.80. HRDC-like_sub1. 1 hit. G3DSA:1.10.287.420. HRDC-like_sub2. 1 hit.
KO	K03051.
Pfam	PF03874. RNA_pol_Rpb4. 1 hit. [Graphical view]
PIRSF	PIRSF005053. RNA_pol_F_arch. 1 hit.
SUPFAM	SSF47819. HRDC_like. 1 hit.
ProtoNet	Search...

Entry information

Entry name

A6VI81_METM7

Accession

Primary (citable) accession number: A6VI81

Entry history

Integrated into UniProtKB/TrEMBL:	August 21, 2007
Last sequence update:	August 21, 2007
Last modified:	November 16, 2011
This is version 25 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)