A6VHB5 (A6VHB5_METM7) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Ribonuclease III EMBL ABR65841.1
EC=3.1.26.3 EMBL ABR65841.1

Gene names

Ordered Locus Names:

MmarC7_0774

Organism

Methanococcus maripaludis (strain C7 / ATCC BAA-1331) [Complete proteome] [HAMAP]

Taxonomic identifier

426368 [NCBI]

Taxonomic lineage

Archaea › Euryarchaeota › Methanococci › Methanococcales › Methanococcaceae › Methanococcus

Protein attributes

Sequence length	229 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

Ontologies

Keywords
Molecular function	Hydrolase EMBL ABR65841.1
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	RNA processing Inferred from electronic annotation. Source: InterPro rRNA catabolic process Inferred from electronic annotation. Source: InterPro
Cellular component	intracellular Inferred from electronic annotation. Source: InterPro
Molecular function	double-stranded RNA binding Inferred from electronic annotation. Source: InterPro ribonuclease III activity Inferred from electronic annotation. Source: EC
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	A6VHB5 [UniParc]. Last modified August 21, 2007. Version 1. Checksum: 0AEB6ACFB1CB2100	FASTA	229	26,369
	10 20 30 40 50 60 MKNFEKLLSK LDIKFNDLDI FKRAFMHSSY VNEQKNTNLE DNERLEYLGD AVLELIISEY 70 80 90 100 110 120 LFKKESLSEG EMSKLRAKYV CESALFTYAK KLKFNDYVLL GKGELNSKGY NKPAIISDVF 130 140 150 160 170 180 EAFIAAIYLD QGLDSAKKFV NNHIIPIIEE NSKELFIDYK TRLQEFPELN NKTIEYINLE 190 200 210 220 EVGEPHDKKF IVAVKSGRKM LGKGTGKSKK EAEMKAAKNA LLKLEKNKN

References

[1]

"Complete sequence of Methanococcus maripaludis C7." Copeland A., Lucas S., Lapidus A., Barry K., Glavina del Rio T., Dalin E., Tice H., Pitluck S., Clum A., Schmutz J., Larimer F., Land M., Hauser L., Kyrpides N., Anderson I., Sieprawska-Lupa M., Whitman W.B., Richardson P. Submitted (JUN-2007) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: C7 / ATCC BAA-1331.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000745 Genomic DNA. Translation: ABR65841.1.
RefSeq	YP_001329992.1. NC_009637.1.
3D structure databases
ProteinModelPortal	A6VHB5.
ModBase	Search...
Protein-protein interaction databases
STRING	A6VHB5.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	5328323.
GenomeReviews	Gene locus MmarC7_0774 in contig CP000745_GR.
KEGG	mmz:MmarC7_0774.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	arNOG12486.
HOGENOM	HBG744556.
OMA	ALTHKSF.
ProtClustDB	CLSK926361.
Family and domain databases
HAMAP	MF_00104. RNase_III. [Tree]
InterPro	IPR001159. Ds-RNA-bd. IPR014720. dsRNA-bd-like. IPR000999. RNase_III. IPR011907. RNase_III_bac. [Graphical view]
Gene3D	G3DSA:3.30.160.20. dsRNA-bd-like. 1 hit. G3DSA:1.10.1520.10. RNase_III. 1 hit.
KO	K03685.
PANTHER	PTHR11207. PTHR11207. 1 hit.
Pfam	PF00035. dsrm. 1 hit. PF00636. Ribonuclease_3. 1 hit. [Graphical view]
SMART	SM00358. DSRM. 1 hit. SM00535. RIBOc. 1 hit. [Graphical view]
SUPFAM	SSF69065. RNase_III. 1 hit.
TIGRFAMs	TIGR02191. RNaseIII. 1 hit.
PROSITE	PS50137. DS_RBD. 1 hit. PS00517. RNASE_3_1. 1 hit. PS50142. RNASE_3_2. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

A6VHB5_METM7

Accession

Primary (citable) accession number: A6VHB5

Entry history

Integrated into UniProtKB/TrEMBL:	August 21, 2007
Last sequence update:	August 21, 2007
Last modified:	December 14, 2011
This is version 29 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)