Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Protein

30S ribosomal protein S4e

Gene

rps4e

Organism
Methanococcus maripaludis (strain C7 / ATCC BAA-1331)
Status
Reviewed-Annotation score: -Protein inferred from homologyi

Functioni

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionRibonucleoprotein, Ribosomal protein, RNA-binding, rRNA-binding

Enzyme and pathway databases

BioCyciMMAR426368:G1G9C-665-MONOMER

Names & Taxonomyi

Protein namesi
Recommended name:
30S ribosomal protein S4eUniRule annotation
Gene namesi
Name:rps4eUniRule annotation
Ordered Locus Names:MmarC7_0656
OrganismiMethanococcus maripaludis (strain C7 / ATCC BAA-1331)
Taxonomic identifieri426368 [NCBI]
Taxonomic lineageiArchaeaEuryarchaeotaMethanococciMethanococcalesMethanococcaceaeMethanococcus
Proteomesi
  • UP000002298 Componenti: Chromosome

Subcellular locationi

GO - Cellular componenti

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_10000813401 – 24430S ribosomal protein S4eAdd BLAST244

Proteomic databases

PRIDEiA6VGZ7

Interactioni

Protein-protein interaction databases

STRINGi426368.MmarC7_0656

Structurei

3D structure databases

SMRiA6VGZ7
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini43 – 106S4 RNA-bindingUniRule annotationAdd BLAST64

Sequence similaritiesi

Belongs to the eukaryotic ribosomal protein eS4 family.UniRule annotation

Phylogenomic databases

eggNOGiarCOG04093 Archaea
COG1471 LUCA
HOGENOMiHOG000231324
KOiK02987
OMAiRKDYKFP
OrthoDBiPOG093Z0C23

Family and domain databases

CDDicd00165 S4, 1 hit
Gene3Di2.30.30.30, 1 hit
2.40.50.740, 1 hit
HAMAPiMF_00485 Ribosomal_S4e, 1 hit
InterProiView protein in InterPro
IPR014722 Rib_L2_dom2
IPR000876 Ribosomal_S4e
IPR013845 Ribosomal_S4e_central_region
IPR038237 Ribosomal_S4e_central_sf
IPR013843 Ribosomal_S4e_N
IPR018199 Ribosomal_S4e_N_CS
IPR002942 S4_RNA-bd
PANTHERiPTHR11581 PTHR11581, 1 hit
PfamiView protein in Pfam
PF00900 Ribosomal_S4e, 1 hit
PF08071 RS4NT, 1 hit
PF01479 S4, 1 hit
PIRSFiPIRSF002116 Ribosomal_S4, 1 hit
ProDomiView protein in ProDom or Entries sharing at least one domain
PD002667 Ribosomal_S4e_central, 1 hit
PROSITEiView protein in PROSITE
PS00528 RIBOSOMAL_S4E, 1 hit
PS50889 S4, 1 hit

Sequencei

Sequence statusi: Complete.

A6VGZ7-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MAIKGPRKHL KRLAAPANWQ LPRKVKAFTV RPSPGPHSMD KSLPLLLVVR
60 70 80 90 100
DVLKYADNAR EAKKIIQTGK ILIDGLKRKE YKHPAGLMDV LSIPEMDENY
110 120 130 140 150
LVLFDESGRI SLKKTDKTDA KLCKIVNKTV IKGGHIQLNL HDGRNQIVKV
160 170 180 190 200
SDATKAEEDV YKTGDSVLVS IPEQSIVGHV AFGEGKLAYV TGGKHVGEFA
210 220 230 240
KIVEVENRAL YSDIVTLENK DGEKFKTVKP YVFIVGQDEP VISM
Length:244
Mass (Da):27,093
Last modified:August 21, 2007 - v1
Checksum:i79B82D677FAA8367
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000745 Genomic DNA Translation: ABR65723.1
RefSeqiWP_011977046.1, NC_009637.1

Genome annotation databases

EnsemblBacteriaiABR65723; ABR65723; MmarC7_0656
GeneIDi5328427
KEGGimmz:MmarC7_0656

Similar proteinsi

Entry informationi

Entry nameiRS4E_METM7
AccessioniPrimary (citable) accession number: A6VGZ7
Entry historyiIntegrated into UniProtKB/Swiss-Prot: May 20, 2008
Last sequence update: August 21, 2007
Last modified: May 23, 2018
This is version 61 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome

Documents

  1. Ribosomal proteins
    Ribosomal proteins families and list of entries
  2. SIMILARITY comments
    Index of protein domains and families

Cookie policy

We would like to use anonymized google analytics cookies to gather statistics on how uniprot.org is used in aggregate. Learn more

UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health