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A6V648 (A6V648_PSEA7) Unreviewed, UniProtKB/TrEMBL

Last modified May 14, 2014. Version 43. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Name:ligD EMBL ABR80822.1
Ordered Locus Names:PSPA7_3173 EMBL ABR80822.1
OrganismPseudomonas aeruginosa (strain PA7) [Complete proteome] [HAMAP] EMBL ABR80822.1
Taxonomic identifier381754 [NCBI]
Taxonomic lineageBacteriaProteobacteriaGammaproteobacteriaPseudomonadalesPseudomonadaceaePseudomonas

Protein attributes

Sequence length847 AA.
Sequence statusComplete.
Protein existencePredicted

Sequences

Sequence LengthMass (Da)Tools
A6V648 [UniParc].

Last modified August 21, 2007. Version 1.
Checksum: B6432AAA4805342D

FASTA84794,686
        10         20         30         40         50         60 
MPSKPLAEYA RKRDFRQTPE PSGRKRRKDG DGLLRYCIQK HDASRLHYDF RLELDGTLKS 

        70         80         90        100        110        120 
WAVPKGPCLD PAVKRLAVQV EDHPLDYADF EGSIPKGHYG AGDVIVWDRG AWTPLDDPRE 

       130        140        150        160        170        180 
GLEKGHLSFL LDGEKLSGRW HLIRTNLRGK QPQWFLVKSK DDEARSLDRF DVLKERPDSV 

       190        200        210        220        230        240 
LSERTLVPRR GEAATPAARP ARRGKAGKAG KGGGKTPMPE WIAPELASLV EQPPHGQWAY 

       250        260        270        280        290        300 
ELKLDGYRLM SRIEDGHVRL LTRNGHDWSE RLPHLKKALA GLGLERSWLD GELVVLDEEG 

       310        320        330        340        350        360 
RPDFQALQNA FEEGHGENIL YFLFDLPYHE GEDLRDVALE ERRARLEALL DGQDEDPLRF 

       370        380        390        400        410        420 
SATLAENPRD LLASACRLGL EGVIGKRLGS VYRSRRSNDW IKLKCQLRQE FVIVGYTEPK 

       430        440        450        460        470        480 
GSRRHIGALL LGLYSPDEER RLRYAGKVGT GFTAASLKKV HERLAPLAIN SSPLAKVPPA 

       490        500        510        520        530        540 
RETGVVQWVR PERLCEVSYA QMTRGGIIRQ AVFHGLREDK PAREVTGERP AGPPPARGAR 

       550        560        570        580        590        600 
KAGSASGASR AATAGVRISH PRRLIDPSIQ ASKLELAEFH ARYADLLLRD LRERPVSLVR 

       610        620        630        640        650        660 
GPDGIGGELF FQKHAARLKI PGIVQLDPAL DPGHPPLLQI RSAEALVGAV QMGSIEFHTW 

       670        680        690        700        710        720 
NASLANLERP DRFVLDLDPD PALPWKRMLE ATQLSLTLLD ELGLRAFLKT SGGKGMHLLV 

       730        740        750        760        770        780 
PLERRHGWDE VKAFAQAISQ HLARLMPERF SAVSGPRNRV GRIFVDYLRN SRGASTVAAY 

       790        800        810        820        830        840 
SVRAREGLPV SVPVFREELD SLQGANQWNL RSLPQRLDEL AGDDPWADYA GTRQRLSAAM 


RRQLGRG 

« Hide

References

[1]Dodson R.J., Harkins D., Paulsen I.T.
Submitted (JUN-2007) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: PA7 EMBL ABR80822.1.
+Additional computationally mapped references.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP000744 Genomic DNA. Translation: ABR80822.1.
RefSeqYP_001348533.1. NC_009656.1.

3D structure databases

ProteinModelPortalA6V648.
SMRA6V648. Positions 550-844.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING381754.PSPA7_3173.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaABR80822; ABR80822; PSPA7_3173.
GeneID5355140.
KEGGpap:PSPA7_3173.
PATRIC19828004. VBIPseAer80442_3015.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG3285.
HOGENOMHOG000222509.
KOK01971.
OMAHVLAAIC.
OrthoDBEOG661H49.

Enzyme and pathway databases

BioCycPAER381754:GHMY-3173-MONOMER.

Family and domain databases

Gene3D2.40.50.140. 1 hit.
InterProIPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR014146. DNA_pol_LigD_ligase_dom.
IPR002755. DNA_primase_S.
IPR014144. LigD_PE_domain.
IPR014145. LigD_pol.
IPR012340. NA-bd_OB-fold.
IPR014143. NHEJ_ligase_prk.
[Graphical view]
PfamPF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
PF01896. DNA_primase_S. 1 hit.
PF13298. LigD_N. 1 hit.
[Graphical view]
SUPFAMSSF50249. SSF50249. 1 hit.
TIGRFAMsTIGR02777. LigD_PE_dom. 1 hit.
TIGR02778. ligD_pol. 1 hit.
TIGR02779. NHEJ_ligase_lig. 1 hit.
TIGR02776. NHEJ_ligase_prk. 1 hit.
PROSITEPS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameA6V648_PSEA7
AccessionPrimary (citable) accession number: A6V648
Entry history
Integrated into UniProtKB/TrEMBL: August 21, 2007
Last sequence update: August 21, 2007
Last modified: May 14, 2014
This is version 43 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)