A6V488 (RL20_PSEA7) Reviewed, UniProtKB/Swiss-Prot

Names and origin

Protein names

Recommended name:
50S ribosomal protein L20

Gene names

Name:	rplT
Ordered Locus Names:	PSPA7_2507

Organism

Pseudomonas aeruginosa (strain PA7) [Complete proteome] [HAMAP]

Taxonomic identifier

381754 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Proteobacteria › Gammaproteobacteria › Pseudomonadales › Pseudomonadaceae › Pseudomonas › Pseudomonas aeruginosa group › Pseudomonas aeruginosa

Protein attributes

Sequence length	118 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Function	Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit By similarity. HAMAP-Rule MF_00382
Sequence similarities	Belongs to the ribosomal protein L20P family.

Ontologies

Keywords
Ligand	RNA-binding rRNA-binding
Molecular function	Ribonucleoprotein Ribosomal protein
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	ribosomal large subunit assembly Inferred from electronic annotation. Source: HAMAP translation Inferred from electronic annotation. Source: InterPro
Cellular_component	ribosome Inferred from electronic annotation. Source: UniProtKB-KW
Molecular_function	rRNA binding Inferred from electronic annotation. Source: HAMAP structural constituent of ribosome Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Molecule processing
	Chain	1 – 118	118	50S ribosomal protein L20 HAMAP-Rule MF_00382		PRO_1000049039

Sequences

	Sequence		Length	Mass (Da)
	A6V488 [UniParc]. Last modified August 21, 2007. Version 1. Checksum: 4AE25B448DF6E8AB	FASTA	118	13,365
	10 20 30 40 50 60 MARVKRGVIA RRRHKKILKL AKGYYGARSR VFRVAKQAVI KAGQYAYRDR RQRKRQFRAL 70 80 90 100 110 WIARINAGAR QNGLSYSRLI AGLKKAAIEI DRKVLADLAV NEKAAFTAIV EKAKASLA

References

[1]	Dodson R.J., Harkins D., Paulsen I.T. Submitted (JUN-2007) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: PA7.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000744 Genomic DNA. Translation: ABR86419.1.
RefSeq	YP_001347873.1. NC_009656.1.
3D structure databases
ProteinModelPortal	A6V488.
SMR	A6V488. Positions 3-117.
ModBase	Search...
Protein-protein interaction databases
STRING	381754.PSPA7_2507.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	ABR86419; ABR86419; PSPA7_2507.
GeneID	5358792.
KEGG	pap:PSPA7_2507.
PATRIC	19826767. VBIPseAer80442_2402.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG0292.
HOGENOM	HOG000035046.
KO	K02887.
OMA	GRRKNVW.
ProtClustDB	PRK05185.
Enzyme and pathway databases
BioCyc	PAER381754:GHMY-2554-MONOMER.
Family and domain databases
HAMAP	MF_00382. Ribosomal_L20.
InterPro	IPR005813. Ribosomal_L20. [Graphical view]
PANTHER	PTHR10986. PTHR10986. 1 hit.
Pfam	PF00453. Ribosomal_L20. 1 hit. [Graphical view]
PRINTS	PR00062. RIBOSOMALL20.
TIGRFAMs	TIGR01032. rplT_bact. 1 hit.
PROSITE	PS00937. RIBOSOMAL_L20. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

RL20_PSEA7

Accession

Primary (citable) accession number: A6V488

Entry history

Integrated into UniProtKB/Swiss-Prot:	January 15, 2008
Last sequence update:	August 21, 2007
Last modified:	May 1, 2013
This is version 35 of the entry and version 1 of the sequence. [Complete history]

Entry status

Reviewed (UniProtKB/Swiss-Prot)

Annotation program

Prokaryotic Protein Annotation Program