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A6V1P7

- ALGL_PSEA7

UniProt

A6V1P7 - ALGL_PSEA7

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Protein

Alginate lyase

Gene
algL, PSPA7_1598
Organism
Pseudomonas aeruginosa (strain PA7)
Status
Reviewed - Annotation score: 2 out of 5 - Protein inferred from homologyi

Functioni

Depolymerizes alginate by cleaving the beta-1,4 glycosidic bond By similarity.UniRule annotation

Catalytic activityi

Eliminative cleavage of polysaccharides containing beta-D-mannuronate residues to give oligosaccharides with 4-deoxy-alpha-L-erythro-hex-4-enopyranuronosyl groups at their non-reducing ends.UniRule annotation

GO - Molecular functioni

  1. poly(beta-D-mannuronate) lyase activity Source: UniProtKB-EC

GO - Biological processi

  1. alginic acid catabolic process Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

Lyase

Enzyme and pathway databases

BioCyciPAER381754:GHMY-1598-MONOMER.

Protein family/group databases

CAZyiPL5. Polysaccharide Lyase Family 5.

Names & Taxonomyi

Protein namesi
Recommended name:
Alginate lyase (EC:4.2.2.3)
Alternative name(s):
Poly(beta-D-mannuronate) lyase
Poly(mana) alginate lyase
Gene namesi
Name:algL
Ordered Locus Names:PSPA7_1598
OrganismiPseudomonas aeruginosa (strain PA7)
Taxonomic identifieri381754 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaPseudomonadalesPseudomonadaceaePseudomonas
ProteomesiUP000001582: Chromosome

Subcellular locationi

Periplasm Reviewed prediction UniRule annotation

GO - Cellular componenti

  1. periplasmic space Source: UniProtKB-SubCell
Complete GO annotation...

Keywords - Cellular componenti

Periplasm

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Signal peptidei1 – 2727 Reviewed predictionAdd
BLAST
Chaini28 – 367340Alginate lyaseUniRule annotationPRO_1000061109Add
BLAST

Interactioni

Protein-protein interaction databases

STRINGi381754.PSPA7_1598.

Family & Domainsi

Sequence similaritiesi

Keywords - Domaini

Signal

Phylogenomic databases

eggNOGiNOG42597.
HOGENOMiHOG000247392.
KOiK01729.
OMAiAAWSVMA.
OrthoDBiEOG6H1PXF.

Family and domain databases

Gene3Di1.50.10.110. 1 hit.
HAMAPiMF_00557. Alginate_lyase.
InterProiIPR022859. Alginate_lyase.
IPR008397. Alginate_lyase_dom.
IPR008929. Chondroitin_lyas.
[Graphical view]
PfamiPF05426. Alginate_lyase. 1 hit.
[Graphical view]
SUPFAMiSSF48230. SSF48230. 1 hit.

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

A6V1P7-1 [UniParc]FASTAAdd to Basket

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MKTSHLIRIT LPGALAAALL ASQVSQAADL VPPPGYYAAV GERKGSAGSC    50
PSVPPPYTGS LVFTSKYEGS DSARATLNAK AEKAFRSQIK DITDMERGAT 100
KLVTQYMRSG RDGDLVCALN WMSAWARAGA LQSDDFNHTG KSMRKWALGS 150
LSGAYMRLKF SSSRPLSAHA GQSREIEDWF ARLGTQVVRD WSNLPLKKIN 200
NHSYWAAWSV MSTAVVTNRR DLFDWAVSEF KVAANQVDEQ GFLPNELKRR 250
QRALAYHNYA LPPLAMIAAF AQVNGVDLRQ ENHGALQRLA ERVMNGVDDE 300
ETFEEKTGED QDMTDLKVDN KYAWLEPYCA LYRCAPKMLE AKKDREPFNS 350
FRLGGEVTRV FSREGGS 367
Length:367
Mass (Da):40,774
Last modified:August 21, 2007 - v1
Checksum:i35ADE8EA39809C48
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP000744 Genomic DNA. Translation: ABR80788.1.
RefSeqiWP_012074764.1. NC_009656.1.
YP_001346982.1. NC_009656.1.

Genome annotation databases

EnsemblBacteriaiABR80788; ABR80788; PSPA7_1598.
GeneIDi5359375.
KEGGipap:PSPA7_1598.
PATRICi19825005. VBIPseAer80442_1539.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP000744 Genomic DNA. Translation: ABR80788.1 .
RefSeqi WP_012074764.1. NC_009656.1.
YP_001346982.1. NC_009656.1.

3D structure databases

ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 381754.PSPA7_1598.

Protein family/group databases

CAZyi PL5. Polysaccharide Lyase Family 5.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai ABR80788 ; ABR80788 ; PSPA7_1598 .
GeneIDi 5359375.
KEGGi pap:PSPA7_1598.
PATRICi 19825005. VBIPseAer80442_1539.

Phylogenomic databases

eggNOGi NOG42597.
HOGENOMi HOG000247392.
KOi K01729.
OMAi AAWSVMA.
OrthoDBi EOG6H1PXF.

Enzyme and pathway databases

BioCyci PAER381754:GHMY-1598-MONOMER.

Family and domain databases

Gene3Di 1.50.10.110. 1 hit.
HAMAPi MF_00557. Alginate_lyase.
InterProi IPR022859. Alginate_lyase.
IPR008397. Alginate_lyase_dom.
IPR008929. Chondroitin_lyas.
[Graphical view ]
Pfami PF05426. Alginate_lyase. 1 hit.
[Graphical view ]
SUPFAMi SSF48230. SSF48230. 1 hit.
ProtoNeti Search...

Publicationsi

  1. Dodson R.J., Harkins D., Paulsen I.T.
    Submitted (JUN-2007) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: PA7.

Entry informationi

Entry nameiALGL_PSEA7
AccessioniPrimary (citable) accession number: A6V1P7
Entry historyi
Integrated into UniProtKB/Swiss-Prot: February 5, 2008
Last sequence update: August 21, 2007
Last modified: September 3, 2014
This is version 40 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome

Documents

  1. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3

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