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A6V1P7

- ALGL_PSEA7

UniProt

A6V1P7 - ALGL_PSEA7

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Protein

Alginate lyase

Gene

algL

Organism
Pseudomonas aeruginosa (strain PA7)
Status
Reviewed - Annotation score: 2 out of 5- Protein inferred from homologyi

Functioni

Depolymerizes alginate by cleaving the beta-1,4 glycosidic bond.UniRule annotation

Catalytic activityi

Eliminative cleavage of polysaccharides containing beta-D-mannuronate residues to give oligosaccharides with 4-deoxy-alpha-L-erythro-hex-4-enopyranuronosyl groups at their non-reducing ends.UniRule annotation

GO - Molecular functioni

  1. poly(beta-D-mannuronate) lyase activity Source: UniProtKB-EC

GO - Biological processi

  1. alginic acid catabolic process Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

Lyase

Enzyme and pathway databases

BioCyciPAER381754:GHMY-1598-MONOMER.

Protein family/group databases

CAZyiPL5. Polysaccharide Lyase Family 5.

Names & Taxonomyi

Protein namesi
Recommended name:
Alginate lyaseUniRule annotation (EC:4.2.2.3UniRule annotation)
Alternative name(s):
Poly(beta-D-mannuronate) lyaseUniRule annotation
Poly(mana) alginate lyaseUniRule annotation
Gene namesi
Name:algLUniRule annotation
Ordered Locus Names:PSPA7_1598
OrganismiPseudomonas aeruginosa (strain PA7)
Taxonomic identifieri381754 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaPseudomonadalesPseudomonadaceaePseudomonas
ProteomesiUP000001582: Chromosome

Subcellular locationi

Periplasm UniRule annotation

GO - Cellular componenti

  1. periplasmic space Source: UniProtKB-KW
Complete GO annotation...

Keywords - Cellular componenti

Periplasm

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Signal peptidei1 – 2727UniRule annotationAdd
BLAST
Chaini28 – 367340Alginate lyasePRO_1000061109Add
BLAST

Interactioni

Protein-protein interaction databases

STRINGi381754.PSPA7_1598.

Family & Domainsi

Sequence similaritiesi

Belongs to the polysaccharide lyase 5 family.UniRule annotation

Keywords - Domaini

Signal

Phylogenomic databases

eggNOGiNOG42597.
HOGENOMiHOG000247392.
KOiK01729.
OMAiAAWSVMA.
OrthoDBiEOG6H1PXF.

Family and domain databases

Gene3Di1.50.10.110. 1 hit.
HAMAPiMF_00557. Alginate_lyase.
InterProiIPR022859. Alginate_lyase.
IPR008397. Alginate_lyase_dom.
IPR008929. Chondroitin_lyas.
[Graphical view]
PfamiPF05426. Alginate_lyase. 1 hit.
[Graphical view]
SUPFAMiSSF48230. SSF48230. 1 hit.

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

A6V1P7-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MKTSHLIRIT LPGALAAALL ASQVSQAADL VPPPGYYAAV GERKGSAGSC
60 70 80 90 100
PSVPPPYTGS LVFTSKYEGS DSARATLNAK AEKAFRSQIK DITDMERGAT
110 120 130 140 150
KLVTQYMRSG RDGDLVCALN WMSAWARAGA LQSDDFNHTG KSMRKWALGS
160 170 180 190 200
LSGAYMRLKF SSSRPLSAHA GQSREIEDWF ARLGTQVVRD WSNLPLKKIN
210 220 230 240 250
NHSYWAAWSV MSTAVVTNRR DLFDWAVSEF KVAANQVDEQ GFLPNELKRR
260 270 280 290 300
QRALAYHNYA LPPLAMIAAF AQVNGVDLRQ ENHGALQRLA ERVMNGVDDE
310 320 330 340 350
ETFEEKTGED QDMTDLKVDN KYAWLEPYCA LYRCAPKMLE AKKDREPFNS
360
FRLGGEVTRV FSREGGS
Length:367
Mass (Da):40,774
Last modified:August 21, 2007 - v1
Checksum:i35ADE8EA39809C48
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000744 Genomic DNA. Translation: ABR80788.1.
RefSeqiWP_012074764.1. NC_009656.1.
YP_001346982.1. NC_009656.1.

Genome annotation databases

EnsemblBacteriaiABR80788; ABR80788; PSPA7_1598.
GeneIDi5359375.
KEGGipap:PSPA7_1598.
PATRICi19825005. VBIPseAer80442_1539.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000744 Genomic DNA. Translation: ABR80788.1 .
RefSeqi WP_012074764.1. NC_009656.1.
YP_001346982.1. NC_009656.1.

3D structure databases

ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 381754.PSPA7_1598.

Protein family/group databases

CAZyi PL5. Polysaccharide Lyase Family 5.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai ABR80788 ; ABR80788 ; PSPA7_1598 .
GeneIDi 5359375.
KEGGi pap:PSPA7_1598.
PATRICi 19825005. VBIPseAer80442_1539.

Phylogenomic databases

eggNOGi NOG42597.
HOGENOMi HOG000247392.
KOi K01729.
OMAi AAWSVMA.
OrthoDBi EOG6H1PXF.

Enzyme and pathway databases

BioCyci PAER381754:GHMY-1598-MONOMER.

Family and domain databases

Gene3Di 1.50.10.110. 1 hit.
HAMAPi MF_00557. Alginate_lyase.
InterProi IPR022859. Alginate_lyase.
IPR008397. Alginate_lyase_dom.
IPR008929. Chondroitin_lyas.
[Graphical view ]
Pfami PF05426. Alginate_lyase. 1 hit.
[Graphical view ]
SUPFAMi SSF48230. SSF48230. 1 hit.
ProtoNeti Search...

Publicationsi

  1. Dodson R.J., Harkins D., Paulsen I.T.
    Submitted (JUN-2007) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: PA7.

Entry informationi

Entry nameiALGL_PSEA7
AccessioniPrimary (citable) accession number: A6V1P7
Entry historyi
Integrated into UniProtKB/Swiss-Prot: February 5, 2008
Last sequence update: August 21, 2007
Last modified: November 26, 2014
This is version 43 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome

Documents

  1. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3