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A6V1P7

- ALGL_PSEA7

UniProt

A6V1P7 - ALGL_PSEA7

Protein

Alginate lyase

Gene

algL

Organism
Pseudomonas aeruginosa (strain PA7)
Status
Reviewed - Annotation score: 2 out of 5- Protein inferred from homologyi
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    • History
      Entry version 41 (01 Oct 2014)
      Sequence version 1 (21 Aug 2007)
      Previous versions | rss
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    • Comment

    Functioni

    Depolymerizes alginate by cleaving the beta-1,4 glycosidic bond.UniRule annotation

    Catalytic activityi

    Eliminative cleavage of polysaccharides containing beta-D-mannuronate residues to give oligosaccharides with 4-deoxy-alpha-L-erythro-hex-4-enopyranuronosyl groups at their non-reducing ends.UniRule annotation

    GO - Molecular functioni

    1. poly(beta-D-mannuronate) lyase activity Source: UniProtKB-EC

    GO - Biological processi

    1. alginic acid catabolic process Source: InterPro

    Keywords - Molecular functioni

    Lyase

    Enzyme and pathway databases

    BioCyciPAER381754:GHMY-1598-MONOMER.

    Protein family/group databases

    CAZyiPL5. Polysaccharide Lyase Family 5.

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Alginate lyaseUniRule annotation (EC:4.2.2.3UniRule annotation)
    Alternative name(s):
    Poly(beta-D-mannuronate) lyaseUniRule annotation
    Poly(mana) alginate lyaseUniRule annotation
    Gene namesi
    Name:algLUniRule annotation
    Ordered Locus Names:PSPA7_1598
    OrganismiPseudomonas aeruginosa (strain PA7)
    Taxonomic identifieri381754 [NCBI]
    Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaPseudomonadalesPseudomonadaceaePseudomonas
    ProteomesiUP000001582: Chromosome

    Subcellular locationi

    Periplasm UniRule annotation

    GO - Cellular componenti

    1. periplasmic space Source: UniProtKB-SubCell

    Keywords - Cellular componenti

    Periplasm

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Signal peptidei1 – 2727UniRule annotationAdd
    BLAST
    Chaini28 – 367340Alginate lyasePRO_1000061109Add
    BLAST

    Interactioni

    Protein-protein interaction databases

    STRINGi381754.PSPA7_1598.

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the polysaccharide lyase 5 family.UniRule annotation

    Keywords - Domaini

    Signal

    Phylogenomic databases

    eggNOGiNOG42597.
    HOGENOMiHOG000247392.
    KOiK01729.
    OMAiAAWSVMA.
    OrthoDBiEOG6H1PXF.

    Family and domain databases

    Gene3Di1.50.10.110. 1 hit.
    HAMAPiMF_00557. Alginate_lyase.
    InterProiIPR022859. Alginate_lyase.
    IPR008397. Alginate_lyase_dom.
    IPR008929. Chondroitin_lyas.
    [Graphical view]
    PfamiPF05426. Alginate_lyase. 1 hit.
    [Graphical view]
    SUPFAMiSSF48230. SSF48230. 1 hit.

    Sequencei

    Sequence statusi: Complete.

    Sequence processingi: The displayed sequence is further processed into a mature form.

    A6V1P7-1 [UniParc]FASTAAdd to Basket

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    MKTSHLIRIT LPGALAAALL ASQVSQAADL VPPPGYYAAV GERKGSAGSC    50
    PSVPPPYTGS LVFTSKYEGS DSARATLNAK AEKAFRSQIK DITDMERGAT 100
    KLVTQYMRSG RDGDLVCALN WMSAWARAGA LQSDDFNHTG KSMRKWALGS 150
    LSGAYMRLKF SSSRPLSAHA GQSREIEDWF ARLGTQVVRD WSNLPLKKIN 200
    NHSYWAAWSV MSTAVVTNRR DLFDWAVSEF KVAANQVDEQ GFLPNELKRR 250
    QRALAYHNYA LPPLAMIAAF AQVNGVDLRQ ENHGALQRLA ERVMNGVDDE 300
    ETFEEKTGED QDMTDLKVDN KYAWLEPYCA LYRCAPKMLE AKKDREPFNS 350
    FRLGGEVTRV FSREGGS 367
    Length:367
    Mass (Da):40,774
    Last modified:August 21, 2007 - v1
    Checksum:i35ADE8EA39809C48
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP000744 Genomic DNA. Translation: ABR80788.1.
    RefSeqiWP_012074764.1. NC_009656.1.
    YP_001346982.1. NC_009656.1.

    Genome annotation databases

    EnsemblBacteriaiABR80788; ABR80788; PSPA7_1598.
    GeneIDi5359375.
    KEGGipap:PSPA7_1598.
    PATRICi19825005. VBIPseAer80442_1539.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP000744 Genomic DNA. Translation: ABR80788.1 .
    RefSeqi WP_012074764.1. NC_009656.1.
    YP_001346982.1. NC_009656.1.

    3D structure databases

    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 381754.PSPA7_1598.

    Protein family/group databases

    CAZyi PL5. Polysaccharide Lyase Family 5.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai ABR80788 ; ABR80788 ; PSPA7_1598 .
    GeneIDi 5359375.
    KEGGi pap:PSPA7_1598.
    PATRICi 19825005. VBIPseAer80442_1539.

    Phylogenomic databases

    eggNOGi NOG42597.
    HOGENOMi HOG000247392.
    KOi K01729.
    OMAi AAWSVMA.
    OrthoDBi EOG6H1PXF.

    Enzyme and pathway databases

    BioCyci PAER381754:GHMY-1598-MONOMER.

    Family and domain databases

    Gene3Di 1.50.10.110. 1 hit.
    HAMAPi MF_00557. Alginate_lyase.
    InterProi IPR022859. Alginate_lyase.
    IPR008397. Alginate_lyase_dom.
    IPR008929. Chondroitin_lyas.
    [Graphical view ]
    Pfami PF05426. Alginate_lyase. 1 hit.
    [Graphical view ]
    SUPFAMi SSF48230. SSF48230. 1 hit.
    ProtoNeti Search...

    Publicationsi

    1. Dodson R.J., Harkins D., Paulsen I.T.
      Submitted (JUN-2007) to the EMBL/GenBank/DDBJ databases
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: PA7.

    Entry informationi

    Entry nameiALGL_PSEA7
    AccessioniPrimary (citable) accession number: A6V1P7
    Entry historyi
    Integrated into UniProtKB/Swiss-Prot: February 5, 2008
    Last sequence update: August 21, 2007
    Last modified: October 1, 2014
    This is version 41 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiReviewed (UniProtKB/Swiss-Prot)
    Annotation programProkaryotic Protein Annotation Program

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome

    Documents

    1. SIMILARITY comments
      Index of protein domains and families

    External Data

    Dasty 3