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A6UZH9

- RL10_PSEA7

UniProt

A6UZH9 - RL10_PSEA7

Protein

50S ribosomal protein L10

Gene

rplJ

Organism
Pseudomonas aeruginosa (strain PA7)
Status
Reviewed - Annotation score: 2 out of 5- Protein inferred from homologyi
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    • History
      Entry version 43 (01 Oct 2014)
      Sequence version 1 (21 Aug 2007)
      Previous versions | rss
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    Functioni

    Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors.UniRule annotation

    GO - Molecular functioni

    1. large ribosomal subunit rRNA binding Source: UniProtKB-HAMAP
    2. structural constituent of ribosome Source: InterPro

    GO - Biological processi

    1. ribosome biogenesis Source: InterPro
    2. translation Source: UniProtKB-HAMAP

    Keywords - Molecular functioni

    Ribonucleoprotein, Ribosomal protein

    Keywords - Ligandi

    RNA-binding, rRNA-binding

    Enzyme and pathway databases

    BioCyciPAER381754:GHMY-828-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    50S ribosomal protein L10UniRule annotation
    Gene namesi
    Name:rplJUniRule annotation
    Ordered Locus Names:PSPA7_0828
    OrganismiPseudomonas aeruginosa (strain PA7)
    Taxonomic identifieri381754 [NCBI]
    Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaPseudomonadalesPseudomonadaceaePseudomonas
    ProteomesiUP000001582: Chromosome

    Subcellular locationi

    GO - Cellular componenti

    1. ribosome Source: UniProtKB-KW

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Chaini1 – 16616650S ribosomal protein L10PRO_1000005561Add
    BLAST

    Interactioni

    Subunit structurei

    Part of the ribosomal stalk of the 50S ribosomal subunit. The N-terminus interacts with L11 and the large rRNA to form the base of the stalk. The C-terminus forms an elongated spine to which L12 dimers bind in a sequential fashion forming a multimeric L10(L12)X complex.UniRule annotation

    Protein-protein interaction databases

    STRINGi381754.PSPA7_0828.

    Structurei

    3D structure databases

    ProteinModelPortaliA6UZH9.
    SMRiA6UZH9. Positions 1-162.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the ribosomal protein L10P family.UniRule annotation

    Phylogenomic databases

    eggNOGiCOG0244.
    HOGENOMiHOG000004851.
    KOiK02864.
    OMAiFSMEDPG.
    OrthoDBiEOG6DNTDR.

    Family and domain databases

    HAMAPiMF_00362. Ribosomal_L10.
    InterProiIPR022973. Ribosomal_L10.
    IPR001790. Ribosomal_L10/acidic_P0.
    IPR002363. Ribosomal_L10_eubac_CS.
    [Graphical view]
    PfamiPF00466. Ribosomal_L10. 1 hit.
    [Graphical view]
    PROSITEiPS01109. RIBOSOMAL_L10. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    A6UZH9-1 [UniParc]FASTAAdd to Basket

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    MAIKLEDKKA IVAEVNEAAK AALSAVVADA RGVTVGAMTG LRKEAREAGV    50
    YVKVVRNTLL KRAVEGTQFD VLNDVFKGPT LIAFSNEHPG AAARIFREFA 100
    KGQDKFEIKA AAFEGQFLAA NQIDVLASLP TYDEAVSQLM SVIQGATSKL 150
    ARTLAAIRDQ KEAAAA 166
    Length:166
    Mass (Da):17,634
    Last modified:August 21, 2007 - v1
    Checksum:i446E614A8CA46A32
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP000744 Genomic DNA. Translation: ABR84259.1.
    RefSeqiYP_001346214.1. NC_009656.1.

    Genome annotation databases

    EnsemblBacteriaiABR84259; ABR84259; PSPA7_0828.
    GeneIDi5357247.
    KEGGipap:PSPA7_0828.
    PATRICi19823489. VBIPseAer80442_0782.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP000744 Genomic DNA. Translation: ABR84259.1 .
    RefSeqi YP_001346214.1. NC_009656.1.

    3D structure databases

    ProteinModelPortali A6UZH9.
    SMRi A6UZH9. Positions 1-162.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 381754.PSPA7_0828.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai ABR84259 ; ABR84259 ; PSPA7_0828 .
    GeneIDi 5357247.
    KEGGi pap:PSPA7_0828.
    PATRICi 19823489. VBIPseAer80442_0782.

    Phylogenomic databases

    eggNOGi COG0244.
    HOGENOMi HOG000004851.
    KOi K02864.
    OMAi FSMEDPG.
    OrthoDBi EOG6DNTDR.

    Enzyme and pathway databases

    BioCyci PAER381754:GHMY-828-MONOMER.

    Family and domain databases

    HAMAPi MF_00362. Ribosomal_L10.
    InterProi IPR022973. Ribosomal_L10.
    IPR001790. Ribosomal_L10/acidic_P0.
    IPR002363. Ribosomal_L10_eubac_CS.
    [Graphical view ]
    Pfami PF00466. Ribosomal_L10. 1 hit.
    [Graphical view ]
    PROSITEi PS01109. RIBOSOMAL_L10. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. Dodson R.J., Harkins D., Paulsen I.T.
      Submitted (JUN-2007) to the EMBL/GenBank/DDBJ databases
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: PA7.

    Entry informationi

    Entry nameiRL10_PSEA7
    AccessioniPrimary (citable) accession number: A6UZH9
    Entry historyi
    Integrated into UniProtKB/Swiss-Prot: January 15, 2008
    Last sequence update: August 21, 2007
    Last modified: October 1, 2014
    This is version 43 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiReviewed (UniProtKB/Swiss-Prot)
    Annotation programProkaryotic Protein Annotation Program

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome

    Documents

    1. Ribosomal proteins
      Ribosomal proteins families and list of entries
    2. SIMILARITY comments
      Index of protein domains and families

    External Data

    Dasty 3