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A6UZH9 (RL10_PSEA7) Reviewed, UniProtKB/Swiss-Prot

Last modified June 11, 2014. Version 42. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (2) | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order

Names and origin

Protein namesRecommended name:
50S ribosomal protein L10
Gene names
Name:rplJ
Ordered Locus Names:PSPA7_0828
OrganismPseudomonas aeruginosa (strain PA7) [Complete proteome] [HAMAP]
Taxonomic identifier381754 [NCBI]
Taxonomic lineageBacteriaProteobacteriaGammaproteobacteriaPseudomonadalesPseudomonadaceaePseudomonas

Protein attributes

Sequence length166 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Function

Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors By similarity. HAMAP-Rule MF_00362

Subunit structure

Part of the ribosomal stalk of the 50S ribosomal subunit. The N-terminus interacts with L11 and the large rRNA to form the base of the stalk. The C-terminus forms an elongated spine to which L12 dimers bind in a sequential fashion forming a multimeric L10(L12)X complex By similarity.

Sequence similarities

Belongs to the ribosomal protein L10P family.

Ontologies

Keywords
   LigandRNA-binding
rRNA-binding
   Molecular functionRibonucleoprotein
Ribosomal protein
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processribosome biogenesis

Inferred from electronic annotation. Source: InterPro

translation

Inferred from electronic annotation. Source: UniProtKB-HAMAP

   Cellular_componentribosome

Inferred from electronic annotation. Source: UniProtKB-KW

   Molecular_functionLSU rRNA binding

Inferred from electronic annotation. Source: UniProtKB-HAMAP

structural constituent of ribosome

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 16616650S ribosomal protein L10 HAMAP-Rule MF_00362
PRO_1000005561

Sequences

Sequence LengthMass (Da)Tools
A6UZH9 [UniParc].

Last modified August 21, 2007. Version 1.
Checksum: 446E614A8CA46A32

FASTA16617,634
        10         20         30         40         50         60 
MAIKLEDKKA IVAEVNEAAK AALSAVVADA RGVTVGAMTG LRKEAREAGV YVKVVRNTLL 

        70         80         90        100        110        120 
KRAVEGTQFD VLNDVFKGPT LIAFSNEHPG AAARIFREFA KGQDKFEIKA AAFEGQFLAA 

       130        140        150        160 
NQIDVLASLP TYDEAVSQLM SVIQGATSKL ARTLAAIRDQ KEAAAA 

« Hide

References

[1]Dodson R.J., Harkins D., Paulsen I.T.
Submitted (JUN-2007) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: PA7.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP000744 Genomic DNA. Translation: ABR84259.1.
RefSeqYP_001346214.1. NC_009656.1.

3D structure databases

ProteinModelPortalA6UZH9.
SMRA6UZH9. Positions 1-162.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING381754.PSPA7_0828.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaABR84259; ABR84259; PSPA7_0828.
GeneID5357247.
KEGGpap:PSPA7_0828.
PATRIC19823489. VBIPseAer80442_0782.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0244.
HOGENOMHOG000004851.
KOK02864.
OMAFSMEDPG.
OrthoDBEOG6DNTDR.

Enzyme and pathway databases

BioCycPAER381754:GHMY-828-MONOMER.

Family and domain databases

HAMAPMF_00362. Ribosomal_L10.
InterProIPR022973. Ribosomal_L10.
IPR001790. Ribosomal_L10/acidic_P0.
IPR002363. Ribosomal_L10_eubac_CS.
[Graphical view]
PfamPF00466. Ribosomal_L10. 1 hit.
[Graphical view]
PROSITEPS01109. RIBOSOMAL_L10. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameRL10_PSEA7
AccessionPrimary (citable) accession number: A6UZH9
Entry history
Integrated into UniProtKB/Swiss-Prot: January 15, 2008
Last sequence update: August 21, 2007
Last modified: June 11, 2014
This is version 42 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Relevant documents

SIMILARITY comments

Index of protein domains and families

Ribosomal proteins

Ribosomal proteins families and list of entries