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Protein

50S ribosomal protein L10

Gene

rplJ

Organism
Pseudomonas aeruginosa (strain PA7)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors.UniRule annotation

GO - Molecular functioni

  1. large ribosomal subunit rRNA binding Source: UniProtKB-HAMAP
  2. structural constituent of ribosome Source: InterPro

GO - Biological processi

  1. ribosome biogenesis Source: InterPro
  2. translation Source: UniProtKB-HAMAP
Complete GO annotation...

Keywords - Molecular functioni

Ribonucleoprotein, Ribosomal protein

Keywords - Ligandi

RNA-binding, rRNA-binding

Enzyme and pathway databases

BioCyciPAER381754:GHMY-828-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
50S ribosomal protein L10UniRule annotation
Gene namesi
Name:rplJUniRule annotation
Ordered Locus Names:PSPA7_0828
OrganismiPseudomonas aeruginosa (strain PA7)
Taxonomic identifieri381754 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaPseudomonadalesPseudomonadaceaePseudomonas
ProteomesiUP000001582: Chromosome

Subcellular locationi

GO - Cellular componenti

  1. ribosome Source: UniProtKB-KW
Complete GO annotation...

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 16616650S ribosomal protein L10PRO_1000005561Add
BLAST

Interactioni

Subunit structurei

Part of the ribosomal stalk of the 50S ribosomal subunit. The N-terminus interacts with L11 and the large rRNA to form the base of the stalk. The C-terminus forms an elongated spine to which L12 dimers bind in a sequential fashion forming a multimeric L10(L12)X complex.UniRule annotation

Protein-protein interaction databases

STRINGi381754.PSPA7_0828.

Structurei

3D structure databases

ProteinModelPortaliA6UZH9.
SMRiA6UZH9. Positions 1-162.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the ribosomal protein L10P family.UniRule annotation

Phylogenomic databases

eggNOGiCOG0244.
HOGENOMiHOG000004851.
KOiK02864.
OMAiMLANEFM.
OrthoDBiEOG6DNTDR.

Family and domain databases

HAMAPiMF_00362. Ribosomal_L10.
InterProiIPR022973. Ribosomal_L10.
IPR001790. Ribosomal_L10/acidic_P0.
IPR002363. Ribosomal_L10_eubac_CS.
[Graphical view]
PfamiPF00466. Ribosomal_L10. 1 hit.
[Graphical view]
PROSITEiPS01109. RIBOSOMAL_L10. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

A6UZH9-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MAIKLEDKKA IVAEVNEAAK AALSAVVADA RGVTVGAMTG LRKEAREAGV
60 70 80 90 100
YVKVVRNTLL KRAVEGTQFD VLNDVFKGPT LIAFSNEHPG AAARIFREFA
110 120 130 140 150
KGQDKFEIKA AAFEGQFLAA NQIDVLASLP TYDEAVSQLM SVIQGATSKL
160
ARTLAAIRDQ KEAAAA
Length:166
Mass (Da):17,634
Last modified:August 21, 2007 - v1
Checksum:i446E614A8CA46A32
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000744 Genomic DNA. Translation: ABR84259.1.
RefSeqiYP_001346214.1. NC_009656.1.

Genome annotation databases

EnsemblBacteriaiABR84259; ABR84259; PSPA7_0828.
GeneIDi5357247.
KEGGipap:PSPA7_0828.
PATRICi19823489. VBIPseAer80442_0782.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000744 Genomic DNA. Translation: ABR84259.1.
RefSeqiYP_001346214.1. NC_009656.1.

3D structure databases

ProteinModelPortaliA6UZH9.
SMRiA6UZH9. Positions 1-162.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi381754.PSPA7_0828.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiABR84259; ABR84259; PSPA7_0828.
GeneIDi5357247.
KEGGipap:PSPA7_0828.
PATRICi19823489. VBIPseAer80442_0782.

Phylogenomic databases

eggNOGiCOG0244.
HOGENOMiHOG000004851.
KOiK02864.
OMAiMLANEFM.
OrthoDBiEOG6DNTDR.

Enzyme and pathway databases

BioCyciPAER381754:GHMY-828-MONOMER.

Family and domain databases

HAMAPiMF_00362. Ribosomal_L10.
InterProiIPR022973. Ribosomal_L10.
IPR001790. Ribosomal_L10/acidic_P0.
IPR002363. Ribosomal_L10_eubac_CS.
[Graphical view]
PfamiPF00466. Ribosomal_L10. 1 hit.
[Graphical view]
PROSITEiPS01109. RIBOSOMAL_L10. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. Dodson R.J., Harkins D., Paulsen I.T.
    Submitted (JUN-2007) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: PA7.

Entry informationi

Entry nameiRL10_PSEA7
AccessioniPrimary (citable) accession number: A6UZH9
Entry historyi
Integrated into UniProtKB/Swiss-Prot: January 15, 2008
Last sequence update: August 21, 2007
Last modified: January 7, 2015
This is version 44 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome

Documents

  1. Ribosomal proteins
    Ribosomal proteins families and list of entries
  2. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.