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Protein

50S ribosomal protein L15

Gene

rpl15

Organism
Methanococcus aeolicus (strain ATCC BAA-1280 / DSM 17508 / OCM 812 / Nankai-3)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

Binds to the 23S rRNA.UniRule annotation

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

Ribonucleoprotein, Ribosomal protein

Keywords - Ligandi

RNA-binding, rRNA-binding

Enzyme and pathway databases

BioCyciMAEO419665:GHVZ-1450-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
50S ribosomal protein L15UniRule annotation
Gene namesi
Name:rpl15UniRule annotation
Ordered Locus Names:Maeo_1406
OrganismiMethanococcus aeolicus (strain ATCC BAA-1280 / DSM 17508 / OCM 812 / Nankai-3)
Taxonomic identifieri419665 [NCBI]
Taxonomic lineageiArchaeaEuryarchaeotaMethanococciMethanococcalesMethanococcaceaeMethanococcus
Proteomesi
  • UP000001106 Componenti: Chromosome

Subcellular locationi

GO - Cellular componenti

Complete GO annotation...

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 14314350S ribosomal protein L15PRO_1000054490Add
BLAST

Interactioni

Subunit structurei

Part of the 50S ribosomal subunit.UniRule annotation

Protein-protein interaction databases

STRINGi419665.Maeo_1406.

Structurei

3D structure databases

ProteinModelPortaliA6UWW0.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the ribosomal protein L15P family.UniRule annotation

Phylogenomic databases

eggNOGiarCOG00779. Archaea.
COG0200. LUCA.
HOGENOMiHOG000231263.
KOiK02876.
OMAiSHTHGWG.

Family and domain databases

Gene3Di4.10.990.10. 1 hit.
HAMAPiMF_01341. Ribosomal_L15. 1 hit.
InterProiIPR027386. 50S_Rbsml_prot_L15P_N.
IPR030878. Ribosomal_L15.
IPR001196. Ribosomal_L15_CS.
IPR021131. Ribosomal_L18e/L15P.
[Graphical view]
PfamiPF00828. Ribosomal_L27A. 1 hit.
[Graphical view]
SUPFAMiSSF52080. SSF52080. 1 hit.
PROSITEiPS00475. RIBOSOMAL_L15. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

A6UWW0-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MIRKSKKITK LRGSRTCGYG AAKKHRGAGH KGGKGLAGVT KHRWIHTVKY
60 70 80 90 100
MPDHIGKYGF KRHSSLIKEL KVINLGQLDE IVSKNKESFE IVDGKIVIDI
110 120 130 140
TTLDYEKVLG KGKITCPMII KAVEFSESAK EKIESAGGEF VEL
Length:143
Mass (Da):15,867
Last modified:August 21, 2007 - v1
Checksum:iABC3F97C309DC501
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000743 Genomic DNA. Translation: ABR56982.1.
RefSeqiWP_011974114.1. NC_009635.1.

Genome annotation databases

EnsemblBacteriaiABR56982; ABR56982; Maeo_1406.
GeneIDi5327297.
KEGGimae:Maeo_1406.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000743 Genomic DNA. Translation: ABR56982.1.
RefSeqiWP_011974114.1. NC_009635.1.

3D structure databases

ProteinModelPortaliA6UWW0.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi419665.Maeo_1406.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiABR56982; ABR56982; Maeo_1406.
GeneIDi5327297.
KEGGimae:Maeo_1406.

Phylogenomic databases

eggNOGiarCOG00779. Archaea.
COG0200. LUCA.
HOGENOMiHOG000231263.
KOiK02876.
OMAiSHTHGWG.

Enzyme and pathway databases

BioCyciMAEO419665:GHVZ-1450-MONOMER.

Family and domain databases

Gene3Di4.10.990.10. 1 hit.
HAMAPiMF_01341. Ribosomal_L15. 1 hit.
InterProiIPR027386. 50S_Rbsml_prot_L15P_N.
IPR030878. Ribosomal_L15.
IPR001196. Ribosomal_L15_CS.
IPR021131. Ribosomal_L18e/L15P.
[Graphical view]
PfamiPF00828. Ribosomal_L27A. 1 hit.
[Graphical view]
SUPFAMiSSF52080. SSF52080. 1 hit.
PROSITEiPS00475. RIBOSOMAL_L15. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiRL15_META3
AccessioniPrimary (citable) accession number: A6UWW0
Entry historyi
Integrated into UniProtKB/Swiss-Prot: January 15, 2008
Last sequence update: August 21, 2007
Last modified: July 6, 2016
This is version 51 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Ribosomal proteins
    Ribosomal proteins families and list of entries
  2. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.