A6UT26 (A6UT26_META3) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
RNA polymerase Rpb4 EMBL ABR55648.1

Gene names

Ordered Locus Names:

Maeo_0056

Organism

Methanococcus aeolicus (strain Nankai-3 / ATCC BAA-1280) [Complete proteome] [HAMAP] EMBL ABR55648.1

Taxonomic identifier

419665 [NCBI]

Taxonomic lineage

Archaea › Euryarchaeota › Methanococci › Methanococcales › Methanococcaceae › Methanococcus

Protein attributes

Sequence length	107 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Technical term	Complete proteome
Gene Ontology (GO)
Molecular function	DNA-directed RNA polymerase activity Inferred from electronic annotation. Source: InterPro nucleotide binding Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	A6UT26 [UniParc]. Last modified August 21, 2007. Version 1. Checksum: 0AB8E254211FAE1E	FASTA	107	12,326
	10 20 30 40 50 60 MIGNELISQK YITLSSAEEL MSNKSSDDEL SYENGCALDY LQRFAKLNAE DVEKLTEELK 70 80 90 100 KLELDEKTIV KIIDILPEDN EDLKLIFYKS DIPKCSEDIL DLCAKFR

References

[1]

"Complete sequence of Methanococcus aeolicus Nankai-3." Copeland A., Lucas S., Lapidus A., Barry K., Glavina del Rio T., Dalin E., Tice H., Pitluck S., Chain P., Malfatti S., Shin M., Vergez L., Schmutz J., Larimer F., Land M., Hauser L., Kyrpides N., Lykidis A. , Sieprawska-Lupa M., Whitman W.B., Richardson P. Submitted (JUN-2007) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: Nankai-3 / ATCC BAA-1280.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000743 Genomic DNA. Translation: ABR55648.1.
RefSeq	YP_001324260.1. NC_009635.1.
3D structure databases
ProteinModelPortal	A6UT26.
SMR	A6UT26. Positions 1-106.
ModBase	Search...
Protein-protein interaction databases
STRING	A6UT26.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	5326586.
GenomeReviews	Gene locus Maeo_0056 in contig CP000743_GR.
KEGG	mae:Maeo_0056.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	arNOG11677.
HOGENOM	HBG321515.
OMA	CALDYLQ.
ProtClustDB	PRK14981.
Family and domain databases
InterPro	IPR010997. HRDC-like. IPR015906. HRDC-like_sub1. IPR015907. HRDC-like_sub2. IPR010924. RNA_pol_F_arc. IPR005574. RNA_pol_II_Rpb4. [Graphical view]
Gene3D	G3DSA:1.10.150.80. HRDC-like_sub1. 1 hit. G3DSA:1.10.287.420. HRDC-like_sub2. 1 hit.
KO	K03051.
Pfam	PF03874. RNA_pol_Rpb4. 1 hit. [Graphical view]
PIRSF	PIRSF005053. RNA_pol_F_arch. 1 hit.
SUPFAM	SSF47819. HRDC_like. 1 hit.
ProtoNet	Search...

Entry information

Entry name

A6UT26_META3

Accession

Primary (citable) accession number: A6UT26

Entry history

Integrated into UniProtKB/TrEMBL:	August 21, 2007
Last sequence update:	August 21, 2007
Last modified:	November 16, 2011
This is version 22 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)