Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Protein

Nascent polypeptide-associated complex protein

Gene

nac

Organism
Methanococcus vannielii (strain SB / ATCC 35089 / DSM 1224)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

Contacts the emerging nascent chain on the ribosome.UniRule annotation

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Biological processi

Protein transport, Transport

Keywords - Ligandi

RNA-binding

Enzyme and pathway databases

BioCyciMVAN406327:GI04-1345-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Nascent polypeptide-associated complex proteinUniRule annotation
Gene namesi
Name:nacUniRule annotation
Ordered Locus Names:Mevan_1301
OrganismiMethanococcus vannielii (strain SB / ATCC 35089 / DSM 1224)
Taxonomic identifieri406327 [NCBI]
Taxonomic lineageiArchaeaEuryarchaeotaMethanococciMethanococcalesMethanococcaceaeMethanococcus
Proteomesi
  • UP000001107 Componenti: Chromosome

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 125125Nascent polypeptide-associated complex proteinPRO_1000083769Add
BLAST

Interactioni

Subunit structurei

Homodimer. Interacts with the ribosome. Binds ribosomal RNA.UniRule annotation

Protein-protein interaction databases

STRINGi406327.Mevan_1301.

Structurei

3D structure databases

ProteinModelPortaliA6URS6.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini9 – 7668NAC-A/BUniRule annotationAdd
BLAST
Domaini86 – 12439UBAUniRule annotationAdd
BLAST

Sequence similaritiesi

Belongs to the NAC-alpha family.UniRule annotation
Contains 1 NAC-A/B (NAC-alpha/beta) domain.UniRule annotation
Contains 1 UBA domain.UniRule annotation

Phylogenomic databases

eggNOGiarCOG04061. Archaea.
COG1308. LUCA.
HOGENOMiHOG000225886.
KOiK03626.
OMAiPRKMKQM.

Family and domain databases

HAMAPiMF_00814. NAC_arch.
InterProiIPR005231. NAC_arc.
IPR002715. Nas_poly-pep-assoc_cplx_dom.
IPR009060. UBA-like.
[Graphical view]
PfamiPF01849. NAC. 1 hit.
[Graphical view]
SMARTiSM01407. NAC. 1 hit.
[Graphical view]
SUPFAMiSSF46934. SSF46934. 1 hit.
TIGRFAMsiTIGR00264. TIGR00264. 1 hit.
PROSITEiPS51151. NAC_AB. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

A6URS6-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MFPGGKMNPR MMKQMQKMMK DFGMDSEDLK AVKVTIELED KIMVFDKPKV
60 70 80 90 100
QVMDMMGTKT YTISGRSKNT SKTAEKIEDT EVKVEVTEED IEMVATQCNV
110 120
SKEEAKTALE DVNGDLAEAI LKLGN
Length:125
Mass (Da):14,047
Last modified:August 21, 2007 - v1
Checksum:iF515FF13968344DC
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000742 Genomic DNA. Translation: ABR55198.1.
RefSeqiWP_012066113.1. NC_009634.1.

Genome annotation databases

EnsemblBacteriaiABR55198; ABR55198; Mevan_1301.
GeneIDi5324790.
KEGGimvn:Mevan_1301.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000742 Genomic DNA. Translation: ABR55198.1.
RefSeqiWP_012066113.1. NC_009634.1.

3D structure databases

ProteinModelPortaliA6URS6.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi406327.Mevan_1301.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiABR55198; ABR55198; Mevan_1301.
GeneIDi5324790.
KEGGimvn:Mevan_1301.

Phylogenomic databases

eggNOGiarCOG04061. Archaea.
COG1308. LUCA.
HOGENOMiHOG000225886.
KOiK03626.
OMAiPRKMKQM.

Enzyme and pathway databases

BioCyciMVAN406327:GI04-1345-MONOMER.

Family and domain databases

HAMAPiMF_00814. NAC_arch.
InterProiIPR005231. NAC_arc.
IPR002715. Nas_poly-pep-assoc_cplx_dom.
IPR009060. UBA-like.
[Graphical view]
PfamiPF01849. NAC. 1 hit.
[Graphical view]
SMARTiSM01407. NAC. 1 hit.
[Graphical view]
SUPFAMiSSF46934. SSF46934. 1 hit.
TIGRFAMsiTIGR00264. TIGR00264. 1 hit.
PROSITEiPS51151. NAC_AB. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: SB / ATCC 35089 / DSM 1224.

Entry informationi

Entry nameiNAC_METVS
AccessioniPrimary (citable) accession number: A6URS6
Entry historyi
Integrated into UniProtKB/Swiss-Prot: May 20, 2008
Last sequence update: August 21, 2007
Last modified: May 11, 2016
This is version 50 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome

Documents

  1. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.