A6UR82 (A6UR82_METVS) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
RNA polymerase Rpb4 EMBL ABR55004.1

Gene names

Ordered Locus Names:

Mevan_1104

Organism

Methanococcus vannielii (strain SB / ATCC 35089 / DSM 1224) [Complete proteome] [HAMAP]

Taxonomic identifier

406327 [NCBI]

Taxonomic lineage

Archaea › Euryarchaeota › Methanococci › Methanococcales › Methanococcaceae › Methanococcus

Protein attributes

Sequence length	107 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Technical term	Complete proteome
Gene Ontology (GO)
Molecular function	DNA-directed RNA polymerase activity Inferred from electronic annotation. Source: InterPro nucleotide binding Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	A6UR82 [UniParc]. Last modified August 21, 2007. Version 1. Checksum: 076C10CB5471DA71	FASTA	107	12,164
	10 20 30 40 50 60 MIGKEVISEK HTTIANALEI MSERANFDEL SYEHGCALDY LQKFSKLNKK DAESMLAQLL 70 80 90 100 NLGLTEKMAV KIIDILPENA EELKVVFYRS DLPENAEDVL DVICKFK

References

[1]

"Complete sequence of Methanococcus vannielii SB." Copeland A., Lucas S., Lapidus A., Barry K., Glavina del Rio T., Dalin E., Tice H., Pitluck S., Chain P., Malfatti S., Shin M., Vergez L., Schmutz J., Larimer F., Land M., Hauser L., Kyrpides N., Anderson I. , Sieprawska-Lupa M., Whitman W.B., Richardson P. Submitted (JUN-2007) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: SB / ATCC 35089 / DSM 1224.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000742 Genomic DNA. Translation: ABR55004.1.
RefSeq	YP_001323616.1. NC_009634.1.
3D structure databases
ProteinModelPortal	A6UR82.
SMR	A6UR82. Positions 1-106.
ModBase	Search...
Protein-protein interaction databases
STRING	A6UR82.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	5324477.
GenomeReviews	Gene locus Mevan_1104 in contig CP000742_GR.
KEGG	mvn:Mevan_1104.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	arNOG11677.
HOGENOM	HBG321515.
OMA	CALDYLQ.
ProtClustDB	PRK14981.
Family and domain databases
InterPro	IPR010997. HRDC-like. IPR015906. HRDC-like_sub1. IPR015907. HRDC-like_sub2. IPR010924. RNA_pol_F_arc. IPR005574. RNA_pol_II_Rpb4. [Graphical view]
Gene3D	G3DSA:1.10.150.80. HRDC-like_sub1. 1 hit. G3DSA:1.10.287.420. HRDC-like_sub2. 1 hit.
KO	K03051.
Pfam	PF03874. RNA_pol_Rpb4. 1 hit. [Graphical view]
PIRSF	PIRSF005053. RNA_pol_F_arch. 1 hit.
SUPFAM	SSF47819. HRDC_like. 1 hit.
ProtoNet	Search...

Entry information

Entry name

A6UR82_METVS

Accession

Primary (citable) accession number: A6UR82

Entry history

Integrated into UniProtKB/TrEMBL:	August 21, 2007
Last sequence update:	August 21, 2007
Last modified:	November 16, 2011
This is version 22 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)