A6UQH3 (A6UQH3_METVS) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Ribonuclease III EMBL ABR54745.1
EC=3.1.26.3 EMBL ABR54745.1

Gene names

Ordered Locus Names:

Mevan_0839

Organism

Methanococcus vannielii (strain SB / ATCC 35089 / DSM 1224) [Complete proteome] [HAMAP]

Taxonomic identifier

406327 [NCBI]

Taxonomic lineage

Archaea › Euryarchaeota › Methanococci › Methanococcales › Methanococcaceae › Methanococcus

Protein attributes

Sequence length	227 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

Ontologies

Keywords
Molecular function	Hydrolase EMBL ABR54745.1
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	RNA processing Inferred from electronic annotation. Source: InterPro rRNA catabolic process Inferred from electronic annotation. Source: InterPro
Cellular component	intracellular Inferred from electronic annotation. Source: InterPro
Molecular function	double-stranded RNA binding Inferred from electronic annotation. Source: InterPro ribonuclease III activity Inferred from electronic annotation. Source: EC
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	A6UQH3 [UniParc]. Last modified August 21, 2007. Version 1. Checksum: D18798DF41C75CD5	FASTA	227	26,325
	10 20 30 40 50 60 MDNFEKLLLE LDIKFNNLNI FKQAFIHSSY VNEHDNENLE DNERLEYLGD AVLELVVSEY 70 80 90 100 110 120 LFENKLLNEG EMSKLRSKYV CEYSLFLYAK KLNFGDYILL GKGEINSNGF NRPTILSDVF 130 140 150 160 170 180 EAFIAAIYLD LGLCSVKKFF NKFIVPIIEE NSKKLFIDYK TKLQEMIQSE NKTVRYILLE 190 200 210 220 ELGEPHDKEF IVAVKIGRKI ISKGVGKSKK DAERQAAKIA LLKLEKK

References

[1]

"Complete sequence of Methanococcus vannielii SB." Copeland A., Lucas S., Lapidus A., Barry K., Glavina del Rio T., Dalin E., Tice H., Pitluck S., Chain P., Malfatti S., Shin M., Vergez L., Schmutz J., Larimer F., Land M., Hauser L., Kyrpides N., Anderson I. , Sieprawska-Lupa M., Whitman W.B., Richardson P. Submitted (JUN-2007) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: SB / ATCC 35089 / DSM 1224.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000742 Genomic DNA. Translation: ABR54745.1.
RefSeq	YP_001323357.1. NC_009634.1.
3D structure databases
ProteinModelPortal	A6UQH3.
ModBase	Search...
Protein-protein interaction databases
STRING	A6UQH3.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	5325043.
GenomeReviews	Gene locus Mevan_0839 in contig CP000742_GR.
KEGG	mvn:Mevan_0839.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	arNOG12486.
HOGENOM	HBG744556.
OMA	ALTHKSF.
ProtClustDB	CLSK926361.
Family and domain databases
HAMAP	MF_00104. RNase_III. [Tree]
InterPro	IPR001159. Ds-RNA-bd. IPR014720. dsRNA-bd-like. IPR000999. RNase_III. IPR011907. RNase_III_bac. [Graphical view]
Gene3D	G3DSA:3.30.160.20. dsRNA-bd-like. 1 hit. G3DSA:1.10.1520.10. RNase_III. 1 hit.
KO	K03685.
PANTHER	PTHR11207. PTHR11207. 1 hit.
Pfam	PF00035. dsrm. 1 hit. PF00636. Ribonuclease_3. 1 hit. [Graphical view]
SMART	SM00358. DSRM. 1 hit. SM00535. RIBOc. 1 hit. [Graphical view]
SUPFAM	SSF69065. RNase_III. 1 hit.
TIGRFAMs	TIGR02191. RNaseIII. 1 hit.
PROSITE	PS50137. DS_RBD. 1 hit. PS00517. RNASE_3_1. 1 hit. PS50142. RNASE_3_2. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

A6UQH3_METVS

Accession

Primary (citable) accession number: A6UQH3

Entry history

Integrated into UniProtKB/TrEMBL:	August 21, 2007
Last sequence update:	August 21, 2007
Last modified:	December 14, 2011
This is version 27 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)