Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Protein
Submitted name:

Aldehyde dehydrogenase

Gene

Smed_6251

Organism
Sinorhizobium medicae (strain WSM419) (Ensifer medicae)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein inferred from homologyi

Functioni

GO - Molecular functioni

Complete GO annotation...

Keywords - Molecular functioni

OxidoreductaseUniRule annotation

Enzyme and pathway databases

BioCyciSMED366394:GJAL-6312-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Aldehyde dehydrogenaseImported
Gene namesi
Ordered Locus Names:Smed_6251Imported
Encoded oniPlasmid pSMED02Imported
OrganismiSinorhizobium medicae (strain WSM419) (Ensifer medicae)Imported
Taxonomic identifieri366394 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRhizobialesRhizobiaceaeSinorhizobium/Ensifer groupSinorhizobium
ProteomesiUP000001108 Componenti: Plasmid pSMED02

Structurei

3D structure databases

ProteinModelPortaliA6UMH0.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the aldehyde dehydrogenase family.UniRule annotation

Phylogenomic databases

eggNOGiCOG1012.
HOGENOMiHOG000271505.
KOiK00128.
OMAiWINLSQA.
OrthoDBiEOG6BS8QW.

Family and domain databases

Gene3Di3.40.309.10. 1 hit.
3.40.605.10. 1 hit.
InterProiIPR016161. Ald_DH/histidinol_DH.
IPR016163. Ald_DH_C.
IPR016160. Ald_DH_CS_CYS.
IPR029510. Ald_DH_CS_GLU.
IPR016162. Ald_DH_N.
IPR015590. Aldehyde_DH_dom.
IPR015657. Aminobutyraldehyde_DH.
[Graphical view]
PANTHERiPTHR11699:SF46. PTHR11699:SF46. 1 hit.
PfamiPF00171. Aldedh. 1 hit.
[Graphical view]
SUPFAMiSSF53720. SSF53720. 1 hit.
PROSITEiPS00070. ALDEHYDE_DEHYDR_CYS. 1 hit.
PS00687. ALDEHYDE_DEHYDR_GLU. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

A6UMH0-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MQRFQCYING EFADGEARFE SIDPTTGRAW AEMPEAREAD VNRAVEAARI
60 70 80 90 100
ALHDQSWSTL TATQRGKLLY KLADLVAENA GRLAELETRD TGKIIRETSS
110 120 130 140 150
QIAYVADYYR YYAGIADKIE GSYLPIDKPD MDVWLRREPI GVVAMVVPWN
160 170 180 190 200
SQLFLSAVKI GPALAAGCTM VVKASEDGPA PLLEFARLVH AAGFPAGVVN
210 220 230 240 250
IVTGFGPSCG AALSRHPQVD HIAFTGGPET ARHIVRNSAE NLASTSLELG
260 270 280 290 300
GKSPFIVFAD ADLESAANAQ IAGIFAATGQ SCVAGSRLIV EKSVKDRFLQ
310 320 330 340 350
ILKAKAETIR IGSPLEMSTE VGPLATERQC NHVKALIARS LAAGAKLVTG
360 370 380 390 400
GTAPEGTGFY YRPTILDCDG SASPSLENEF FGPVLSVLSF ETEAEALHLA
410 420 430 440 450
NGSRFGLAAG VFTQNLTRAH RLMKGIRAGI VWVNTYRAVS PVAPFGGFGL
460 470 480
SGHGREGGLE AALDYTRSKT VWLRTSDDPI PDPFVMR
Length:487
Mass (Da):52,189
Last modified:August 21, 2007 - v1
Checksum:i0AD5992C8185835D
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000740 Genomic DNA. Translation: ABR64850.1.
RefSeqiWP_011970937.1. NC_009621.1.
YP_001314783.1. NC_009621.1.

Genome annotation databases

EnsemblBacteriaiABR64850; ABR64850; Smed_6251.
GeneIDi5320553.
KEGGismd:Smed_6251.
PATRICi23618193. VBISinMed134228_2769.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000740 Genomic DNA. Translation: ABR64850.1.
RefSeqiWP_011970937.1. NC_009621.1.
YP_001314783.1. NC_009621.1.

3D structure databases

ProteinModelPortaliA6UMH0.
ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiABR64850; ABR64850; Smed_6251.
GeneIDi5320553.
KEGGismd:Smed_6251.
PATRICi23618193. VBISinMed134228_2769.

Phylogenomic databases

eggNOGiCOG1012.
HOGENOMiHOG000271505.
KOiK00128.
OMAiWINLSQA.
OrthoDBiEOG6BS8QW.

Enzyme and pathway databases

BioCyciSMED366394:GJAL-6312-MONOMER.

Family and domain databases

Gene3Di3.40.309.10. 1 hit.
3.40.605.10. 1 hit.
InterProiIPR016161. Ald_DH/histidinol_DH.
IPR016163. Ald_DH_C.
IPR016160. Ald_DH_CS_CYS.
IPR029510. Ald_DH_CS_GLU.
IPR016162. Ald_DH_N.
IPR015590. Aldehyde_DH_dom.
IPR015657. Aminobutyraldehyde_DH.
[Graphical view]
PANTHERiPTHR11699:SF46. PTHR11699:SF46. 1 hit.
PfamiPF00171. Aldedh. 1 hit.
[Graphical view]
SUPFAMiSSF53720. SSF53720. 1 hit.
PROSITEiPS00070. ALDEHYDE_DEHYDR_CYS. 1 hit.
PS00687. ALDEHYDE_DEHYDR_GLU. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "Complete sequence of Sinorhizobium medicae WSM419 plasmid pSMED02."
    US DOE Joint Genome Institute
    Copeland A., Lucas S., Lapidus A., Barry K., Glavina del Rio T., Dalin E., Tice H., Pitluck S., Chain P., Malfatti S., Shin M., Vergez L., Schmutz J., Larimer F., Land M., Hauser L., Kyrpides N., Mikhailova N., Reeve W.G., Richardson P.
    Submitted (JUN-2007) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: WSM419Imported.

Entry informationi

Entry nameiA6UMH0_SINMW
AccessioniPrimary (citable) accession number: A6UMH0
Entry historyi
Integrated into UniProtKB/TrEMBL: August 21, 2007
Last sequence update: August 21, 2007
Last modified: June 24, 2015
This is version 52 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported, PlasmidImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.