A6UJE1 (A6UJE1_SINMW) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Glycoside hydrolase family 25 EMBL ABR63771.1

Gene names

Ordered Locus Names:

Smed_4990

Encoded on

Plasmid pSMED01 EMBL ABR63771.1

Organism

Sinorhizobium medicae (strain WSM419) (Ensifer medicae) [Complete proteome] [HAMAP]

Taxonomic identifier

366394 [NCBI]

Taxonomic lineage

Bacteria › Proteobacteria › Alphaproteobacteria › Rhizobiales › Rhizobiaceae › Sinorhizobium/Ensifer group › Sinorhizobium

Protein attributes

Sequence length	333 AA.
Sequence status	Complete.
Sequence processing	The displayed sequence is further processed into a mature form.
Protein existence	Predicted

Ontologies

Keywords
Domain	Signal EMBL ABR63771.1
Molecular function	Hydrolase EMBL ABR63771.1
Technical term	Complete proteome Plasmid EMBL ABR63771.1
Gene Ontology (GO)
Biological process	cell wall macromolecule catabolic process Inferred from electronic annotation. Source: InterPro peptidoglycan catabolic process Inferred from electronic annotation. Source: InterPro
Molecular function	cation binding Inferred from electronic annotation. Source: InterPro lysozyme activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Molecule processing
	Signal peptide	1 – 24	24	Potential EMBL ABR63771.1
	Chain	25 – 333	309	Potential EMBL ABR63771.1		PRO_5000258069

Sequences

	Sequence		Length	Mass (Da)
	A6UJE1 [UniParc]. Last modified August 21, 2007. Version 1. Checksum: 3E6B802F7BC25277	FASTA	333	37,297
	10 20 30 40 50 60 MRHFSVVSAI VIFGLVLSGC GFGGDRPSRE TTSSVRPASP VPSAEVSAVA AKSAPEALAW 70 80 90 100 110 120 AGPVPEPQAF TSAQRTVGMP VPAERPLAML APENPAGPRG GRTRVYSHSF RDAHPINFGK 130 140 150 160 170 180 RSPRKMAVHG VDVSRWQGDI NWAKLRSQGA NFAYIKATDG GDHLDPMFKK NWRRANEAGL 190 200 210 220 230 240 KRGAYHFFYW CRTAGEQADW FIRNVPRDPT ALPPVIDVEW NGESSCKRRP SRERVLEKMQ 250 260 270 280 290 300 VFMDKLERHY GQRPIIYTAP DFYRDNLQGA FPNHPFWLRS VAAHPSKVYP GRKWVFWQYS 310 320 330 GSGLSHGVEG RIDLNVFNGS EEDWHNWVAA RSS

References

[1]

"Complete sequence of Sinorhizobium medicae WSM419 plasmid pSMED01." Copeland A., Lucas S., Lapidus A., Barry K., Glavina del Rio T., Dalin E., Tice H., Pitluck S., Chain P., Malfatti S., Shin M., Vergez L., Schmutz J., Larimer F., Land M., Hauser L., Kyrpides N., Mikhailova N., Reeve W.G., Richardson P. Submitted (JUN-2007) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: WSM419.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000739 Genomic DNA. Translation: ABR63771.1.
RefSeq	YP_001313704.1. NC_009620.1.
3D structure databases
ProteinModelPortal	A6UJE1.
ModBase	Search...
Protein-protein interaction databases
STRING	A6UJE1.
Protein family/group databases
CAZy	GH25. Glycoside Hydrolase Family 25.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	5318711.
GenomeReviews	Gene locus Smed_4990 in contig CP000739_GR.
KEGG	smd:Smed_4990.
PATRIC	23615607. VBISinMed134228_1475.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG3757.
HOGENOM	HBG580490.
OMA	NGESSCK.
ProtClustDB	CLSK862917.
Enzyme and pathway databases
BioCyc	SMED366394:SMED_4990-MONOMER.
Family and domain databases
InterPro	IPR002053. Glyco_hydro_25. IPR018077. Glyco_hydro_fam25_subgr. IPR013781. Glyco_hydro_subgr_catalytic. IPR017853. Glycoside_hydrolase_SF. [Graphical view]
Gene3D	G3DSA:3.20.20.80. Glyco_hydro_cat. 1 hit.
KO	K07273.
Pfam	PF01183. Glyco_hydro_25. 1 hit. [Graphical view]
SMART	SM00641. Glyco_25. 1 hit. [Graphical view]
SUPFAM	SSF51445. Glyco_hydro_cat. 1 hit.
ProtoNet	Search...

Entry information

Entry name

A6UJE1_SINMW

Accession

Primary (citable) accession number: A6UJE1

Entry history

Integrated into UniProtKB/TrEMBL:	August 21, 2007
Last sequence update:	August 21, 2007
Last modified:	December 14, 2011
This is version 26 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)