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A6UIJ4

- A6UIJ4_SINMW

UniProt

A6UIJ4 - A6UIJ4_SINMW

Protein
Submitted name:

4-aminobutyrate aminotransferase

Gene

Smed_4677

Organism
Sinorhizobium medicae (strain WSM419) (Ensifer medicae)
Status
Unreviewed - Annotation score: 1 out of 5- Protein inferred from homologyi
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    • History
      Entry version 40 (01 Oct 2014)
      Sequence version 1 (21 Aug 2007)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. 4-aminobutyrate transaminase activity Source: InterPro
    2. pyridoxal phosphate binding Source: InterPro

    GO - Biological processi

    1. gamma-aminobutyric acid metabolic process Source: InterPro

    Keywords - Molecular functioni

    AminotransferaseImported, Transferase

    Keywords - Ligandi

    Pyridoxal phosphateUniRule annotation

    Enzyme and pathway databases

    BioCyciSMED366394:GJAL-4739-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    4-aminobutyrate aminotransferaseImported
    Gene namesi
    Ordered Locus Names:Smed_4677Imported
    Encoded oniPlasmid pSMED01Imported
    OrganismiSinorhizobium medicae (strain WSM419) (Ensifer medicae)Imported
    Taxonomic identifieri366394 [NCBI]
    Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRhizobialesRhizobiaceaeSinorhizobium/Ensifer groupSinorhizobium
    ProteomesiUP000001108: Plasmid pSMED01

    Interactioni

    Protein-protein interaction databases

    STRINGi366394.Smed_4677.

    Structurei

    3D structure databases

    ProteinModelPortaliA6UIJ4.
    SMRiA6UIJ4. Positions 4-421.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.UniRule annotation

    Phylogenomic databases

    eggNOGiCOG0160.
    HOGENOMiHOG000020206.
    KOiK00823.
    OMAiFHAPFPV.
    OrthoDBiEOG6QVRHN.

    Family and domain databases

    Gene3Di3.40.640.10. 1 hit.
    3.90.1150.10. 2 hits.
    InterProiIPR004632. 4NH2But_aminotransferase_bac.
    IPR005814. Aminotrans_3.
    IPR015424. PyrdxlP-dep_Trfase.
    IPR015421. PyrdxlP-dep_Trfase_major_sub1.
    IPR015422. PyrdxlP-dep_Trfase_major_sub2.
    [Graphical view]
    PANTHERiPTHR11986. PTHR11986. 1 hit.
    PfamiPF00202. Aminotran_3. 1 hit.
    [Graphical view]
    PIRSFiPIRSF000521. Transaminase_4ab_Lys_Orn. 1 hit.
    SUPFAMiSSF53383. SSF53383. 1 hit.
    TIGRFAMsiTIGR00700. GABAtrnsam. 1 hit.
    PROSITEiPS00600. AA_TRANSFER_CLASS_3. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    A6UIJ4-1 [UniParc]FASTAAdd to Basket

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    MTSLTDRKNA AISRGVGMTT QIYAERAENA EIWDKEGNRY IDFASGIAVV    50
    NTGHRHPKVI AAVKAQLDRF THTCHQVVPY ENYVHLAERL NAIVPGDFAK 100
    KTIFVTTGAE AVENAVKIAR AATGRQAIVA FGGGFHGRTF MGMALTGKVV 150
    PYKVGFGAMP ADVFHAPFPV ELHGVSVEQS LAALKKLFAA DVDPNRVAAI 200
    IIEPVQGEGG FYPVPTAFMK ALREICDQNG ILLIADEVQT GFARTGKLLA 250
    MEHHGVAPDL TTMAKSLAGG FPLAAVTGRA EIMDAPGPGG LGGTYGGNPL 300
    GIAAAHAVLD VIAEENLCER ANQLGNRLKQ RLAAIREKAP EIVDIRGPGF 350
    MNAVEFNDVK TNVPSAEFAN KVRLLALEKG LILLTCGVHG NVIRFLAPIT 400
    IQDDVFAEAL DILESSILEA RG 422
    Length:422
    Mass (Da):44,949
    Last modified:August 21, 2007 - v1
    Checksum:iD4799CA6A777B87D
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP000739 Genomic DNA. Translation: ABR63474.1.
    RefSeqiYP_001313407.1. NC_009620.1.

    Genome annotation databases

    EnsemblBacteriaiABR63474; ABR63474; Smed_4677.
    GeneIDi5318134.
    KEGGismd:Smed_4677.
    PATRICi23614979. VBISinMed134228_1161.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP000739 Genomic DNA. Translation: ABR63474.1 .
    RefSeqi YP_001313407.1. NC_009620.1.

    3D structure databases

    ProteinModelPortali A6UIJ4.
    SMRi A6UIJ4. Positions 4-421.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 366394.Smed_4677.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai ABR63474 ; ABR63474 ; Smed_4677 .
    GeneIDi 5318134.
    KEGGi smd:Smed_4677.
    PATRICi 23614979. VBISinMed134228_1161.

    Phylogenomic databases

    eggNOGi COG0160.
    HOGENOMi HOG000020206.
    KOi K00823.
    OMAi FHAPFPV.
    OrthoDBi EOG6QVRHN.

    Enzyme and pathway databases

    BioCyci SMED366394:GJAL-4739-MONOMER.

    Family and domain databases

    Gene3Di 3.40.640.10. 1 hit.
    3.90.1150.10. 2 hits.
    InterProi IPR004632. 4NH2But_aminotransferase_bac.
    IPR005814. Aminotrans_3.
    IPR015424. PyrdxlP-dep_Trfase.
    IPR015421. PyrdxlP-dep_Trfase_major_sub1.
    IPR015422. PyrdxlP-dep_Trfase_major_sub2.
    [Graphical view ]
    PANTHERi PTHR11986. PTHR11986. 1 hit.
    Pfami PF00202. Aminotran_3. 1 hit.
    [Graphical view ]
    PIRSFi PIRSF000521. Transaminase_4ab_Lys_Orn. 1 hit.
    SUPFAMi SSF53383. SSF53383. 1 hit.
    TIGRFAMsi TIGR00700. GABAtrnsam. 1 hit.
    PROSITEi PS00600. AA_TRANSFER_CLASS_3. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "Complete sequence of Sinorhizobium medicae WSM419 plasmid pSMED01."
      US DOE Joint Genome Institute
      Copeland A., Lucas S., Lapidus A., Barry K., Glavina del Rio T., Dalin E., Tice H., Pitluck S., Chain P., Malfatti S., Shin M., Vergez L., Schmutz J., Larimer F., Land M., Hauser L., Kyrpides N., Mikhailova N., Reeve W.G., Richardson P.
      Submitted (JUN-2007) to the EMBL/GenBank/DDBJ databases
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: WSM419Imported.

    Entry informationi

    Entry nameiA6UIJ4_SINMW
    AccessioniPrimary (citable) accession number: A6UIJ4
    Entry historyi
    Integrated into UniProtKB/TrEMBL: August 21, 2007
    Last sequence update: August 21, 2007
    Last modified: October 1, 2014
    This is version 40 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteomeImported, PlasmidImported

    External Data

    Dasty 3