A6UIJ4 (A6UIJ4_SINMW) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
4-aminobutyrate aminotransferase EMBL ABR63474.1

Gene names

Ordered Locus Names:

Smed_4677 EMBL ABR63474.1

Encoded on

Plasmid pSMED01 EMBL ABR63474.1

Organism

Sinorhizobium medicae (strain WSM419) (Ensifer medicae) [Complete proteome] [HAMAP] EMBL ABR63474.1

Taxonomic identifier

366394 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Proteobacteria › Alphaproteobacteria › Rhizobiales › Rhizobiaceae › Sinorhizobium/Ensifer group › Sinorhizobium › Sinorhizobium medicae

Protein attributes

Sequence length	422 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Sequence similarities

Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. RuleBase RU003560

Ontologies

Keywords
Ligand	Pyridoxal phosphate RuleBase RU003560
Molecular function	Aminotransferase EMBL ABR63474.1 Transferase
Technical term	Complete proteome Plasmid EMBL ABR63474.1
Gene Ontology (GO)
Biological_process	gamma-aminobutyric acid metabolic process Inferred from electronic annotation. Source: InterPro
Molecular_function	4-aminobutyrate transaminase activity Inferred from electronic annotation. Source: InterPro pyridoxal phosphate binding Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	A6UIJ4 [UniParc]. Last modified August 21, 2007. Version 1. Checksum: D4799CA6A777B87D	FASTA	422	44,949
	10 20 30 40 50 60 MTSLTDRKNA AISRGVGMTT QIYAERAENA EIWDKEGNRY IDFASGIAVV NTGHRHPKVI 70 80 90 100 110 120 AAVKAQLDRF THTCHQVVPY ENYVHLAERL NAIVPGDFAK KTIFVTTGAE AVENAVKIAR 130 140 150 160 170 180 AATGRQAIVA FGGGFHGRTF MGMALTGKVV PYKVGFGAMP ADVFHAPFPV ELHGVSVEQS 190 200 210 220 230 240 LAALKKLFAA DVDPNRVAAI IIEPVQGEGG FYPVPTAFMK ALREICDQNG ILLIADEVQT 250 260 270 280 290 300 GFARTGKLLA MEHHGVAPDL TTMAKSLAGG FPLAAVTGRA EIMDAPGPGG LGGTYGGNPL 310 320 330 340 350 360 GIAAAHAVLD VIAEENLCER ANQLGNRLKQ RLAAIREKAP EIVDIRGPGF MNAVEFNDVK 370 380 390 400 410 420 TNVPSAEFAN KVRLLALEKG LILLTCGVHG NVIRFLAPIT IQDDVFAEAL DILESSILEA RG

References

[1]

"Complete sequence of Sinorhizobium medicae WSM419 plasmid pSMED01." US DOE Joint Genome Institute Copeland A., Lucas S., Lapidus A., Barry K., Glavina del Rio T., Dalin E., Tice H., Pitluck S., Chain P., Malfatti S., Shin M., Vergez L., Schmutz J., Larimer F., Land M., Hauser L., Kyrpides N., Mikhailova N., Reeve W.G., Richardson P. Submitted (JUN-2007) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: WSM419.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000739 Genomic DNA. Translation: ABR63474.1.
RefSeq	YP_001313407.1. NC_009620.1.
3D structure databases
ProteinModelPortal	A6UIJ4.
SMR	A6UIJ4. Positions 4-421.
ModBase	Search...
Protein-protein interaction databases
STRING	366394.Smed_4677.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	ABR63474; ABR63474; Smed_4677.
GeneID	5318134.
KEGG	smd:Smed_4677.
PATRIC	23614979. VBISinMed134228_1161.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG0160.
HOGENOM	HOG000020206.
KO	K00823.
OMA	NSFTHTA.
ProtClustDB	PRK07495.
Enzyme and pathway databases
BioCyc	SMED366394:GJAL-4739-MONOMER.
Family and domain databases
Gene3D	3.40.640.10. 1 hit. 3.90.1150.10. 2 hits.
InterPro	IPR004632. 4NH2But_aminotransferase_bac. IPR005814. Aminotrans_3. IPR015424. PyrdxlP-dep_Trfase. IPR015421. PyrdxlP-dep_Trfase_major_sub1. IPR015422. PyrdxlP-dep_Trfase_major_sub2. [Graphical view]
PANTHER	PTHR11986. PTHR11986. 1 hit.
Pfam	PF00202. Aminotran_3. 1 hit. [Graphical view]
SUPFAM	SSF53383. PyrdxlP-dep_Trfase_major. 1 hit.
TIGRFAMs	TIGR00700. GABAtrnsam. 1 hit.
PROSITE	PS00600. AA_TRANSFER_CLASS_3. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

A6UIJ4_SINMW

Accession

Primary (citable) accession number: A6UIJ4

Entry history

Integrated into UniProtKB/TrEMBL:	August 21, 2007
Last sequence update:	August 21, 2007
Last modified:	May 1, 2013
This is version 36 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)