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A6UIJ4 (A6UIJ4_SINMW) Unreviewed, UniProtKB/TrEMBL

Last modified May 14, 2014. Version 39. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Ordered Locus Names:Smed_4677 EMBL ABR63474.1
Encoded onPlasmid pSMED01 EMBL ABR63474.1
OrganismSinorhizobium medicae (strain WSM419) (Ensifer medicae) [Complete proteome] [HAMAP] EMBL ABR63474.1
Taxonomic identifier366394 [NCBI]
Taxonomic lineageBacteriaProteobacteriaAlphaproteobacteriaRhizobialesRhizobiaceaeSinorhizobium/Ensifer groupSinorhizobium

Protein attributes

Sequence length422 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Sequences

Sequence LengthMass (Da)Tools
A6UIJ4 [UniParc].

Last modified August 21, 2007. Version 1.
Checksum: D4799CA6A777B87D

FASTA42244,949
        10         20         30         40         50         60 
MTSLTDRKNA AISRGVGMTT QIYAERAENA EIWDKEGNRY IDFASGIAVV NTGHRHPKVI 

        70         80         90        100        110        120 
AAVKAQLDRF THTCHQVVPY ENYVHLAERL NAIVPGDFAK KTIFVTTGAE AVENAVKIAR 

       130        140        150        160        170        180 
AATGRQAIVA FGGGFHGRTF MGMALTGKVV PYKVGFGAMP ADVFHAPFPV ELHGVSVEQS 

       190        200        210        220        230        240 
LAALKKLFAA DVDPNRVAAI IIEPVQGEGG FYPVPTAFMK ALREICDQNG ILLIADEVQT 

       250        260        270        280        290        300 
GFARTGKLLA MEHHGVAPDL TTMAKSLAGG FPLAAVTGRA EIMDAPGPGG LGGTYGGNPL 

       310        320        330        340        350        360 
GIAAAHAVLD VIAEENLCER ANQLGNRLKQ RLAAIREKAP EIVDIRGPGF MNAVEFNDVK 

       370        380        390        400        410        420 
TNVPSAEFAN KVRLLALEKG LILLTCGVHG NVIRFLAPIT IQDDVFAEAL DILESSILEA 


RG 

« Hide

References

[1]"Complete sequence of Sinorhizobium medicae WSM419 plasmid pSMED01."
US DOE Joint Genome Institute
Copeland A., Lucas S., Lapidus A., Barry K., Glavina del Rio T., Dalin E., Tice H., Pitluck S., Chain P., Malfatti S., Shin M., Vergez L., Schmutz J., Larimer F., Land M., Hauser L., Kyrpides N., Mikhailova N., Reeve W.G., Richardson P.
Submitted (JUN-2007) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: WSM419.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP000739 Genomic DNA. Translation: ABR63474.1.
RefSeqYP_001313407.1. NC_009620.1.

3D structure databases

ProteinModelPortalA6UIJ4.
SMRA6UIJ4. Positions 4-421.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING366394.Smed_4677.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaABR63474; ABR63474; Smed_4677.
GeneID5318134.
KEGGsmd:Smed_4677.
PATRIC23614979. VBISinMed134228_1161.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0160.
HOGENOMHOG000020206.
KOK00823.
OMAFHAPFPV.
OrthoDBEOG6QVRHN.

Enzyme and pathway databases

BioCycSMED366394:GJAL-4739-MONOMER.

Family and domain databases

Gene3D3.40.640.10. 1 hit.
3.90.1150.10. 2 hits.
InterProIPR004632. 4NH2But_aminotransferase_bac.
IPR005814. Aminotrans_3.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
IPR015422. PyrdxlP-dep_Trfase_major_sub2.
[Graphical view]
PANTHERPTHR11986. PTHR11986. 1 hit.
PfamPF00202. Aminotran_3. 1 hit.
[Graphical view]
PIRSFPIRSF000521. Transaminase_4ab_Lys_Orn. 1 hit.
SUPFAMSSF53383. SSF53383. 1 hit.
TIGRFAMsTIGR00700. GABAtrnsam. 1 hit.
PROSITEPS00600. AA_TRANSFER_CLASS_3. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameA6UIJ4_SINMW
AccessionPrimary (citable) accession number: A6UIJ4
Entry history
Integrated into UniProtKB/TrEMBL: August 21, 2007
Last sequence update: August 21, 2007
Last modified: May 14, 2014
This is version 39 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)