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A6UGR6 (A6UGR6_SINMW) Unreviewed, UniProtKB/TrEMBL

Last modified May 14, 2014. Version 40. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Ordered Locus Names:Smed_4038 EMBL ABR62846.1
Encoded onPlasmid pSMED01 EMBL ABR62846.1
OrganismSinorhizobium medicae (strain WSM419) (Ensifer medicae) [Complete proteome] [HAMAP] EMBL ABR62846.1
Taxonomic identifier366394 [NCBI]
Taxonomic lineageBacteriaProteobacteriaAlphaproteobacteriaRhizobialesRhizobiaceaeSinorhizobium/Ensifer groupSinorhizobium

Protein attributes

Sequence length544 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Sequences

Sequence LengthMass (Da)Tools
A6UGR6 [UniParc].

Last modified August 21, 2007. Version 1.
Checksum: 9D5A6913E7CE8518

FASTA54461,374
        10         20         30         40         50         60 
MNEAPWFTSS VIYGIDVRRF ADGNGDGIGD FIGLRERVVY LSHLGIDCVW LSPFFRSPFA 

        70         80         90        100        110        120 
DNGYDVSDYY SVDPALGTLD DFLNFLHAAG EHGIRVIIDL VANHTSSEHP WFQAARRDAR 

       130        140        150        160        170        180 
CRFRDYYVWS ASPPPVAPDN KTAFPGEESS VWTYDELAQA YYFHKFRHFQ PDLNIANPAV 

       190        200        210        220        230        240 
RDELLRVVDY WLTLGVDGFR VDAAPFVIGE TGIEHADPRD PHGFLREMRE LVEGRRRDGL 

       250        260        270        280        290        300 
LLGEADLSPE KLRPYFGEGK LDLLFNFVLS ASFAASLARQ KADLIGQALS IMPEPPPHRG 

       310        320        330        340        350        360 
WVNFLRNLDE LNLDRLPEDI QQETFAAFAP DEEMRIYGRG IRRRLAPMLE GNQTRLELAF 

       370        380        390        400        410        420 
SLLLSSPGVP LVLYGDEIGM GEDPSRPGRE PVRVPMQWNA GANAGFSTAQ RARLIQPIVT 

       430        440        450        460        470        480 
DGPFAFKRIN VEAQREDPRS LLNRVRAMIL MRRSHKLFQR GRPIVLHTRD PALFALAYSD 

       490        500        510        520        530        540 
GTELFVVLHN LTEAKRRAEV ELPGAIDARL KDVFGEGEVE LSGQHLTMGL GPFGYAWLHS 


GRKD 

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References

[1]"Complete sequence of Sinorhizobium medicae WSM419 plasmid pSMED01."
US DOE Joint Genome Institute
Copeland A., Lucas S., Lapidus A., Barry K., Glavina del Rio T., Dalin E., Tice H., Pitluck S., Chain P., Malfatti S., Shin M., Vergez L., Schmutz J., Larimer F., Land M., Hauser L., Kyrpides N., Mikhailova N., Reeve W.G., Richardson P.
Submitted (JUN-2007) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: WSM419.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP000739 Genomic DNA. Translation: ABR62846.1.
RefSeqYP_001312779.1. NC_009620.1.

3D structure databases

ProteinModelPortalA6UGR6.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING366394.Smed_4038.

Protein family/group databases

CAZyGH13. Glycoside Hydrolase Family 13.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaABR62846; ABR62846; Smed_4038.
GeneID5318338.
KEGGsmd:Smed_4038.
PATRIC23613626. VBISinMed134228_0486.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0366.
HOGENOMHOG000220639.
KOK05343.
OMAYESESLE.
OrthoDBEOG6RVFV2.

Enzyme and pathway databases

BioCycSMED366394:GJAL-4099-MONOMER.

Family and domain databases

Gene3D2.60.40.1180. 1 hit.
3.20.20.80. 3 hits.
InterProIPR015902. Glyco_hydro_13.
IPR013780. Glyco_hydro_13_b.
IPR006047. Glyco_hydro_13_cat_dom.
IPR006589. Glyco_hydro_13_sub_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PANTHERPTHR10357. PTHR10357. 1 hit.
PfamPF00128. Alpha-amylase. 1 hit.
[Graphical view]
SMARTSM00642. Aamy. 1 hit.
[Graphical view]
SUPFAMSSF51445. SSF51445. 2 hits.
ProtoNetSearch...

Entry information

Entry nameA6UGR6_SINMW
AccessionPrimary (citable) accession number: A6UGR6
Entry history
Integrated into UniProtKB/TrEMBL: August 21, 2007
Last sequence update: August 21, 2007
Last modified: May 14, 2014
This is version 40 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)