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A6UFV7 (A6UFV7_SINMW) Unreviewed, UniProtKB/TrEMBL

Last modified January 22, 2014. Version 41. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
EC=4.1.1.39 EMBL ABR62537.1
Gene names
Ordered Locus Names:Smed_3724 EMBL ABR62537.1
Encoded onPlasmid pSMED01 EMBL ABR62537.1
OrganismSinorhizobium medicae (strain WSM419) (Ensifer medicae) [Complete proteome] [HAMAP] EMBL ABR62537.1
Taxonomic identifier366394 [NCBI]
Taxonomic lineageBacteriaProteobacteriaAlphaproteobacteriaRhizobialesRhizobiaceaeSinorhizobium/Ensifer groupSinorhizobium

Protein attributes

Sequence length418 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Sequence similarities

Belongs to the RuBisCO large chain family. RuleBase RU004228

Ontologies

Keywords
   Molecular functionLyase EMBL ABR62537.1
   Technical termComplete proteome
Plasmid EMBL ABR62537.1
Gene Ontology (GO)
   Biological_processcarbon fixation

Inferred from electronic annotation. Source: InterPro

   Molecular_functionmagnesium ion binding

Inferred from electronic annotation. Source: InterPro

ribulose-bisphosphate carboxylase activity

Inferred from electronic annotation. Source: UniProtKB-EC

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
A6UFV7 [UniParc].

Last modified August 21, 2007. Version 1.
Checksum: 0B92B8169766DBFB

FASTA41844,781
        10         20         30         40         50         60 
MIHITYRIET PGDVEALARK IASDQSTGTF VAVPGETEEL KRRAAARVVA IRHLPPADRA 

        70         80         90        100        110        120 
SLPDEAGDAT RFNRADAEIA YPLEAVGTDL SALMTIAIGG VYAIKGMTGI RVVDMKLPPE 

       130        140        150        160        170        180 
FAAAHPGPQF GVAGSRRLTG VEGRPIIGTI VKPALGLLPD ETAALVGDLL SSGVDFIKDD 

       190        200        210        220        230        240 
EKLMSPAYSP LSARIAAIMP KIRDHEQKTG KKVMYAFGIS HTDPDEMMRN HDLVVAAGGN 

       250        260        270        280        290        300 
AAVVNINSIG MGGVAFLRKR SNLVLHAHRN GWDILTRHGG LGMEFSVWQQ FWRLLGVDQF 

       310        320        330        340        350        360 
QINGIRVKYW EPDDSFVKSF KAVSTPLFSR EDCPLPVVCS GQWGGQAPET FVRTGRTTDL 

       370        380        390        400        410 
LYLCGGGVVS HPGGAGAGVR AVRQAWEAAV AGIPLSDYAK EHPELAQSIE KFADGKGA 

« Hide

References

[1]"Complete sequence of Sinorhizobium medicae WSM419 plasmid pSMED01."
US DOE Joint Genome Institute
Copeland A., Lucas S., Lapidus A., Barry K., Glavina del Rio T., Dalin E., Tice H., Pitluck S., Chain P., Malfatti S., Shin M., Vergez L., Schmutz J., Larimer F., Land M., Hauser L., Kyrpides N., Mikhailova N., Reeve W.G., Richardson P.
Submitted (JUN-2007) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: WSM419.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP000739 Genomic DNA. Translation: ABR62537.1.
RefSeqYP_001312470.1. NC_009620.1.

3D structure databases

ProteinModelPortalA6UFV7.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING366394.Smed_3724.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaABR62537; ABR62537; Smed_3724.
GeneID5318590.
KEGGsmd:Smed_3724.
PATRIC23612964. VBISinMed134228_0155.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG1850.
HOGENOMHOG000230831.
KOK01601.
OMAFECAGDP.
OrthoDBEOG62K1SK.
ProtClustDBCLSK864599.

Enzyme and pathway databases

BioCycSMED366394:GJAL-3785-MONOMER.

Family and domain databases

Gene3D3.20.20.110. 1 hit.
3.30.70.150. 1 hit.
InterProIPR020878. RuBisCo_large_chain_AS.
IPR000685. RuBisCO_lsu_C.
IPR017443. RuBisCO_lsu_fd_N.
[Graphical view]
PfamPF00016. RuBisCO_large. 1 hit.
[Graphical view]
SUPFAMSSF51649. SSF51649. 1 hit.
SSF54966. SSF54966. 1 hit.
PROSITEPS00157. RUBISCO_LARGE. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameA6UFV7_SINMW
AccessionPrimary (citable) accession number: A6UFV7
Entry history
Integrated into UniProtKB/TrEMBL: August 21, 2007
Last sequence update: August 21, 2007
Last modified: January 22, 2014
This is version 41 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)