A6UFK7 (A6UFK7_SINMW) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Recommended name:
NADH-quinone oxidoreductase subunit RuleBase RU003639
EC=1.6.99.5 RuleBase RU003639

Gene names

Ordered Locus Names:

Smed_3623

Encoded on

Plasmid pSMED01 EMBL ABR62437.1

Organism

Sinorhizobium medicae (strain WSM419) (Ensifer medicae) [Complete proteome] [HAMAP]

Taxonomic identifier

366394 [NCBI]

Taxonomic lineage

Bacteria › Proteobacteria › Alphaproteobacteria › Rhizobiales › Rhizobiaceae › Sinorhizobium/Ensifer group › Sinorhizobium

Protein attributes

Sequence length	121 AA.
Sequence status	Complete.
Sequence processing	The displayed sequence is further processed into a mature form.
Protein existence	Inferred from homology

General annotation (Comments)

Function	NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain By similarity. RuleBase RU003639
Catalytic activity	NADH + quinone = NAD+ + quinol. RuleBase RU003639
Subcellular location	Membrane; Multi-pass membrane protein By similarity RuleBase RU003639.
Sequence similarities	Belongs to the complex I subunit 3 family. RuleBase RU003639

Ontologies

Keywords
Cellular component	Membrane
Domain	Signal EMBL ABR62437.1 Transmembrane RuleBase RU003639
Ligand	NAD RuleBase RU003639 Ubiquinone EMBL ABR62437.1
Molecular function	Oxidoreductase RuleBase RU003639
PTM	Quinone RuleBase RU003639
Technical term	Complete proteome Plasmid EMBL ABR62437.1
Gene Ontology (GO)
Cellular component	integral to membrane Inferred from electronic annotation. Source: UniProtKB-KW
Molecular function	NADH dehydrogenase (ubiquinone) activity Inferred from electronic annotation. Source: InterPro quinone binding Inferred from electronic annotation. Source: UniProtKB-KW
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Molecule processing
	Signal peptide	1 – 22	22	Potential EMBL ABR62437.1
	Chain	23 – 121	99	Potential EMBL ABR62437.1		PRO_5000257801

Sequences

	Sequence		Length	Mass (Da)
	A6UFK7 [UniParc]. Last modified August 21, 2007. Version 1. Checksum: 4B7D0534F9C1E618	FASTA	121	13,431
	10 20 30 40 50 60 MTAMEFLPVL FMVAGIVLVA AATLFVSSLL RPSNPYPEKN APYECGMEAA GEAAGGRFRV 70 80 90 100 110 120 PFFILAILLV IFDVEAMFLF PWAVVLKEIG IVGYIEMFVF MLLLLVGFAY AWLKGALEWQ E

References

[1]

"Complete sequence of Sinorhizobium medicae WSM419 plasmid pSMED01." Copeland A., Lucas S., Lapidus A., Barry K., Glavina del Rio T., Dalin E., Tice H., Pitluck S., Chain P., Malfatti S., Shin M., Vergez L., Schmutz J., Larimer F., Land M., Hauser L., Kyrpides N., Mikhailova N., Reeve W.G., Richardson P. Submitted (JUN-2007) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: WSM419.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000739 Genomic DNA. Translation: ABR62437.1.
RefSeq	YP_001312370.1. NC_009620.1.
3D structure databases
ModBase	Search...
Protein-protein interaction databases
STRING	A6UFK7.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	5318154.
GenomeReviews	Gene locus Smed_3623 in contig CP000739_GR.
KEGG	smd:Smed_3623.
PATRIC	23612758. VBISinMed134228_0052.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG0838.
HOGENOM	HBG605540.
OMA	GERELTY.
ProtClustDB	CLSK807696.
Enzyme and pathway databases
BioCyc	SMED366394:SMED_3623-MONOMER.
Family and domain databases
HAMAP	MF_01394. NDH1_NuoA. [Tree]
InterPro	IPR023043. NAD(P)H_OxRDtase_bac/plastid. IPR000440. NADH_UbQ/plastoQ_OxRdtase_su3. [Graphical view]
KO	K00330.
PANTHER	PTHR11058. Oxidored_q4. 1 hit.
Pfam	PF00507. Oxidored_q4. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

A6UFK7_SINMW

Accession

Primary (citable) accession number: A6UFK7

Entry history

Integrated into UniProtKB/TrEMBL:	August 21, 2007
Last sequence update:	August 21, 2007
Last modified:	December 14, 2011
This is version 28 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)