A6UF65 (A6UF65_SINMW) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Lysine--tRNA ligase EMBL ABR62295.1
EC=6.1.1.6 EMBL ABR62295.1

Gene names

Ordered Locus Names:

Smed_3477

Organism

Sinorhizobium medicae (strain WSM419) (Ensifer medicae) [Complete proteome] [HAMAP]

Taxonomic identifier

366394 [NCBI]

Taxonomic lineage

Bacteria › Proteobacteria › Alphaproteobacteria › Rhizobiales › Rhizobiaceae › Sinorhizobium/Ensifer group › Sinorhizobium

Protein attributes

Sequence length	350 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Sequence similarities

Belongs to the class-II aminoacyl-tRNA synthetase family. RuleBase RU003746

Ontologies

Keywords
Biological process	Protein biosynthesis RuleBase RU003747
Ligand	ATP-binding RuleBase RU003747 Nucleotide-binding
Molecular function	Aminoacyl-tRNA synthetase RuleBase RU003747 Ligase
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	lysyl-tRNA aminoacylation Inferred from electronic annotation. Source: InterPro
Cellular component	cytoplasm Inferred from electronic annotation. Source: InterPro
Molecular function	ATP binding Inferred from electronic annotation. Source: UniProtKB-KW lysine-tRNA ligase activity Inferred from electronic annotation. Source: EC
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	A6UF65 [UniParc]. Last modified August 21, 2007. Version 1. Checksum: 0522637DF37ADD50	FASTA	350	39,007
	10 20 30 40 50 60 MPHASPWWTR DVHADRRPFL IGRNRIQSAL RRFFDERDFI EVDTAALQVS PGNEAHLHAF 70 80 90 100 110 120 ATQALGLDGS VQPLYLHTSP EFACKKLIAA GERRIACFAH VYRNRERGAL HHPEFTMLEW 130 140 150 160 170 180 YRAEESYETL MRDCAEILAL AAETVAARSL VYGGRECDPF AEPERLSVAE AFSRFAGIDL 190 200 210 220 230 240 LGSIAKDGST DRENLAAAMR KAGLRVARDD GWADLFSRVL VEKIEPNLGF GRATILDEYP 250 260 270 280 290 300 VSEAALARRA ARDPRVAERF ELYACGVELA NAFGELTDAA EQRRRFALEM EEKARVYGET 310 320 330 340 350 YPIDDDFLAA LSSMPEASGI ALGFDRLVML ATGASRIDQV LWAPVAEVTP

References

[1]

"Complete sequence of Sinorhizobium medicae WSM419 chromosome." Copeland A., Lucas S., Lapidus A., Barry K., Glavina del Rio T., Dalin E., Tice H., Pitluck S., Chain P., Malfatti S., Shin M., Vergez L., Schmutz J., Larimer F., Land M., Hauser L., Kyrpides N., Mikhailova N., Reeve W.G., Richardson P. Submitted (JUN-2007) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: WSM419.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000738 Genomic DNA. Translation: ABR62295.1.
RefSeq	YP_001329130.1. NC_009636.1.
3D structure databases
ProteinModelPortal	A6UF65.
ModBase	Search...
Protein-protein interaction databases
STRING	A6UF65.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	5324365.
GenomeReviews	Gene locus Smed_3477 in contig CP000738_GR.
KEGG	smd:Smed_3477.
PATRIC	23626237. VBISinMed134228_6727.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG2269.
HOGENOM	HBG631383.
OMA	MPEASGI.
ProtClustDB	CLSK2393300.
Enzyme and pathway databases
BioCyc	SMED366394:SMED_3477-MONOMER.
Family and domain databases
InterPro	IPR004364. aa-tRNA-synt_II. IPR018150. aa-tRNA-synt_II-like. IPR006195. aa-tRNA-synth_II. IPR004525. Lys-tRNA-synth-rel. IPR018149. Lys-tRNA-synth_II_C. [Graphical view]
KO	K04568.
PANTHER	PTHR22594. aa-tRNA-synt_II. 1 hit. PTHR22594:SF7. PTHR22594:SF7. 1 hit.
Pfam	PF00152. tRNA-synt_2. 1 hit. [Graphical view]
PRINTS	PR00982. TRNASYNTHLYS.
TIGRFAMs	TIGR00462. GenX. 1 hit.
PROSITE	PS50862. AA_TRNA_LIGASE_II. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

A6UF65_SINMW

Accession

Primary (citable) accession number: A6UF65

Entry history

Integrated into UniProtKB/TrEMBL:	August 21, 2007
Last sequence update:	August 21, 2007
Last modified:	December 14, 2011
This is version 33 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)