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A6UCT1 (A6UCT1_SINMW) Unreviewed, UniProtKB/TrEMBL

Last modified May 14, 2014. Version 41. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein attributes

Sequence length865 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Sequences

Sequence LengthMass (Da)Tools
A6UCT1 [UniParc].

Last modified August 21, 2007. Version 1.
Checksum: 23C03684C3E2D7E1

FASTA86595,409
        10         20         30         40         50         60 
MAARNETLTE YNRRRDFTRT KEPKGTVARR SGNRMRFLVQ KHAATRLHYD FRLEWEGVLK 

        70         80         90        100        110        120 
SWAVTRGPSL NPEDKRLAVR TEDHPLAYGD FEGTIPKGEY GGGTVMLWDT GWWEPEDDPS 

       130        140        150        160        170        180 
KALRKGKLSF KLHGSRMKGG WALVRMRPRE GEKRENWLLV KETDEIASKD GESLINENIT 

       190        200        210        220        230        240 
SVVTGRTMEE IAEGRGEKRS RVWHSNKSTA ANLRAGAVAE DGNARKRPTR KPSGKLPTFR 

       250        260        270        280        290        300 
APQLATLVTQ VPVGDAWLNE AKFDGYRLVC ALGGGTARCY TRNGLDWTEK FPVIAAALAE 

       310        320        330        340        350        360 
LDCRSALIDG EVVALSEGGS TFSALQKALA TGASTRLYAF DLIELDGKDL SRKPLVERKE 

       370        380        390        400        410        420 
KLEALLQTLG TTSTIQFSEH VRGNGEHVLA AICKAGQEGI IAKEANAPYR SGRTRSWLKV 

       430        440        450        460        470        480 
KCTKRQEFVI GGYSLSDKKG RAFASLIVGT FEGGKLIYRG GVGTGFSKKT MEDLAAAFAS 

       490        500        510        520        530        540 
RKRETSPFDS IPRERMRHSV WLKPDLVAEV DFAEFTAEGH IRHGSFEGLR EDKEAKAVKL 

       550        560        570        580        590        600 
ETSKPAEVES GTTTKGKSTT KARRTSAAQG DADVLGIRIS HPDRVLFKGQ GITKIDLARY 

       610        620        630        640        650        660 
YAIVADRMLP FAADHPVSLV RCPQGGERQC FFQKHASDGF PDAIREVPIT ESSGDTEDYM 

       670        680        690        700        710        720 
YIHDAKGLVA AVQMGTLEFH IWGARTDRLE KPDRLVFDLD PDPSVDFATV KAAAVELRDE 

       730        740        750        760        770        780 
LAGIGLKTVP MVTGGKGVHV IVPLRPHAEW DEVKGFAKAL AQSFAERDPD HFVATMSKAK 

       790        800        810        820        830        840 
RKGRIFIDWL RNDRGATAIA PYSTRARAGG PVATPVGWEE LESLDAANGF HIPEILARIE 

       850        860 
AGTDPWRDIG KISQSLTKKI LNSVA 

« Hide

References

[1]"Complete sequence of Sinorhizobium medicae WSM419 chromosome."
US DOE Joint Genome Institute
Copeland A., Lucas S., Lapidus A., Barry K., Glavina del Rio T., Dalin E., Tice H., Pitluck S., Chain P., Malfatti S., Shin M., Vergez L., Schmutz J., Larimer F., Land M., Hauser L., Kyrpides N., Mikhailova N., Reeve W.G., Richardson P.
Submitted (JUN-2007) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: WSM419.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP000738 Genomic DNA. Translation: ABR61461.1.
RefSeqYP_001328296.1. NC_009636.1.

3D structure databases

ProteinModelPortalA6UCT1.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING366394.Smed_2631.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaABR61461; ABR61461; Smed_2631.
GeneID5323500.
KEGGsmd:Smed_2631.
PATRIC23624399. VBISinMed134228_5828.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG3285.
HOGENOMHOG000222509.
KOK01971.
OMAHVLAAIC.
OrthoDBEOG661H49.

Enzyme and pathway databases

BioCycSMED366394:GJAL-2673-MONOMER.

Family and domain databases

Gene3D2.40.50.140. 1 hit.
InterProIPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR014146. DNA_pol_LigD_ligase_dom.
IPR002755. DNA_primase_S.
IPR014144. LigD_PE_domain.
IPR014145. LigD_pol.
IPR012340. NA-bd_OB-fold.
IPR014143. NHEJ_ligase_prk.
[Graphical view]
PfamPF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
PF01896. DNA_primase_S. 1 hit.
PF13298. LigD_N. 1 hit.
[Graphical view]
SUPFAMSSF50249. SSF50249. 1 hit.
TIGRFAMsTIGR02777. LigD_PE_dom. 1 hit.
TIGR02778. ligD_pol. 1 hit.
TIGR02779. NHEJ_ligase_lig. 1 hit.
TIGR02776. NHEJ_ligase_prk. 1 hit.
PROSITEPS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameA6UCT1_SINMW
AccessionPrimary (citable) accession number: A6UCT1
Entry history
Integrated into UniProtKB/TrEMBL: August 21, 2007
Last sequence update: August 21, 2007
Last modified: May 14, 2014
This is version 41 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)