A6UC44 (A6UC44_SINMW) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Extracellular ligand-binding receptor EMBL ABR61224.1

Gene names

Ordered Locus Names:

Smed_2392

Organism

Sinorhizobium medicae (strain WSM419) (Ensifer medicae) [Complete proteome] [HAMAP]

Taxonomic identifier

366394 [NCBI]

Taxonomic lineage

Bacteria › Proteobacteria › Alphaproteobacteria › Rhizobiales › Rhizobiaceae › Sinorhizobium/Ensifer group › Sinorhizobium

Protein attributes

Sequence length	372 AA.
Sequence status	Complete.
Sequence processing	The displayed sequence is further processed into a mature form.
Protein existence	Predicted

Ontologies

Keywords
Domain	Signal EMBL ABR61224.1
Molecular function	Receptor EMBL ABR61224.1
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	amino acid transport Inferred from electronic annotation. Source: InterPro
Cellular component	outer membrane-bounded periplasmic space Inferred from electronic annotation. Source: InterPro
Molecular function	receptor activity Inferred from electronic annotation. Source: UniProtKB-KW
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Molecule processing
	Signal peptide	1 – 24	24	Potential EMBL ABR61224.1
	Chain	25 – 372	348	Potential EMBL ABR61224.1		PRO_5000257599

Sequences

	Sequence		Length	Mass (Da)
	A6UC44 [UniParc]. Last modified August 21, 2007. Version 1. Checksum: 33EA38DE714218D2	FASTA	372	39,158
	10 20 30 40 50 60 MRKSLLSAVA LTAMLAFSGT AWAEILVGVG APLTGPNAAF GAQIQKGAEQ AAEDINAAGG 70 80 90 100 110 120 INGEQIRIVL GDDVSDPKQG VSVAQKFVAD GVKFVVGHFN SGVSIPASEI YAENGLLQVT 130 140 150 160 170 180 PASTNPQFTE RGLWNTFRTC GRDDQQGAVA GAYIAANFKD AKVAVIHDKT PYGQGLADET 190 200 210 220 230 240 KKSMNEAGVT EALYEGINTG DKDFSALIAK MKQAGVSIVY YGGLHTEAGL IMRQMKDQGL 250 260 270 280 290 300 KATLMSGDGI VSNELASIAG DAVDGTLMTF APDPRKSPAA KDLVEKFRTA GFEPEAYTLY 310 320 330 340 350 360 AYAALQVIAE GAKAAGNSDP QAVAEAIKAK GPFKTAIGEL GFDEKGDITR PDYVMYTWKK 370 GDDGKFSYFQ NE

References

[1]

"Complete sequence of Sinorhizobium medicae WSM419 chromosome." Copeland A., Lucas S., Lapidus A., Barry K., Glavina del Rio T., Dalin E., Tice H., Pitluck S., Chain P., Malfatti S., Shin M., Vergez L., Schmutz J., Larimer F., Land M., Hauser L., Kyrpides N., Mikhailova N., Reeve W.G., Richardson P. Submitted (JUN-2007) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: WSM419.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000738 Genomic DNA. Translation: ABR61224.1.
RefSeq	YP_001328059.1. NC_009636.1.
3D structure databases
ProteinModelPortal	A6UC44.
ModBase	Search...
Protein-protein interaction databases
STRING	A6UC44.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	5323253.
GenomeReviews	Gene locus Smed_2392 in contig CP000738_GR.
KEGG	smd:Smed_2392.
PATRIC	23623877. VBISinMed134228_5575.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG0683.
HOGENOM	HBG695960.
OMA	NPKFTER.
ProtClustDB	CLSK863921.
Enzyme and pathway databases
BioCyc	SMED366394:SMED_2392-MONOMER.
Family and domain databases
InterPro	IPR001828. ANF_lig-bd_rcpt. IPR000709. Leu_Ile_Val-bd. [Graphical view]
KO	K01999.
Pfam	PF01094. ANF_receptor. 1 hit. [Graphical view]
PRINTS	PR00337. LEUILEVALBP.
ProtoNet	Search...

Entry information

Entry name

A6UC44_SINMW

Accession

Primary (citable) accession number: A6UC44

Entry history

Integrated into UniProtKB/TrEMBL:	August 21, 2007
Last sequence update:	August 21, 2007
Last modified:	December 14, 2011
This is version 22 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)