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Protein

Elongation factor Ts

Gene

tsf

Organism
Sinorhizobium medicae (strain WSM419) (Ensifer medicae)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF-Tu.GTP complex up to the GTP hydrolysis stage on the ribosome.UniRule annotation

GO - Molecular functioni

Complete GO annotation...

Keywords - Molecular functioni

Elongation factor

Keywords - Biological processi

Protein biosynthesis

Enzyme and pathway databases

BioCyciSMED366394:GJAL-1152-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Elongation factor TsUniRule annotation
Short name:
EF-TsUniRule annotation
Gene namesi
Name:tsfUniRule annotation
Ordered Locus Names:Smed_1132
OrganismiSinorhizobium medicae (strain WSM419) (Ensifer medicae)
Taxonomic identifieri366394 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRhizobialesRhizobiaceaeSinorhizobium/Ensifer groupSinorhizobium
Proteomesi
  • UP000001108 Componenti: Chromosome

Subcellular locationi

  • Cytoplasm UniRule annotation

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

Cytoplasm

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 307307Elongation factor TsPRO_1000006185Add
BLAST

Proteomic databases

PRIDEiA6U8K3.

Interactioni

Protein-protein interaction databases

STRINGi366394.Smed_1132.

Structurei

3D structure databases

ProteinModelPortaliA6U8K3.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Region

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Regioni79 – 824Involved in Mg(2+) ion dislocation from EF-TuUniRule annotation

Sequence similaritiesi

Belongs to the EF-Ts family.UniRule annotation

Phylogenomic databases

eggNOGiENOG4105CU7. Bacteria.
COG0264. LUCA.
HOGENOMiHOG000220987.
KOiK02357.
OMAiATYIHNA.
OrthoDBiPOG091H02HG.

Family and domain databases

Gene3Di3.30.479.20. 3 hits.
HAMAPiMF_00050. EF_Ts. 1 hit.
InterProiIPR001816. Transl_elong_EFTs/EF1B.
IPR014039. Transl_elong_EFTs/EF1B_dimer.
IPR018101. Transl_elong_Ts_CS.
IPR009060. UBA-like.
[Graphical view]
PANTHERiPTHR11741. PTHR11741. 1 hit.
PfamiPF00889. EF_TS. 1 hit.
[Graphical view]
SUPFAMiSSF46934. SSF46934. 1 hit.
SSF54713. SSF54713. 2 hits.
TIGRFAMsiTIGR00116. tsf. 1 hit.
PROSITEiPS01126. EF_TS_1. 1 hit.
PS01127. EF_TS_2. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

A6U8K3-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MTVTAAMVKE LREKTGAGMM DCKKALAETN GDMEAAIDWL RAKGIAKADK
60 70 80 90 100
KSGRTAAEGL IGIASAGAKA VVVEINSETD FVARNDAFQE LVRGVANVAL
110 120 130 140 150
GTDGSVAAVS KATYPATGKS VEDTIKDAIA TIGENMTLRR SAMLEVEDGV
160 170 180 190 200
VATYVHNAAG EGIGKLGVLV ALKSSGDKEA LNAIGRQVAM HVAATNPLAV
210 220 230 240 250
RSSEIDPAVA ERERNVFIEQ SRASGKPDNI IEKMVDGRMR KFFEEVALLS
260 270 280 290 300
QAFVMNPDQT VEAAIKEAEK SVGAPIEVAG IARLLLGEGV EKEESDFAAE

VAAAAKG
Length:307
Mass (Da):32,060
Last modified:August 21, 2007 - v1
Checksum:i65C8425B7C49F45B
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000738 Genomic DNA. Translation: ABR59983.1.
RefSeqiWP_011975302.1. NC_009636.1.
YP_001326818.1. NC_009636.1.

Genome annotation databases

EnsemblBacteriaiABR59983; ABR59983; Smed_1132.
GeneIDi5321978.
KEGGismd:Smed_1132.
PATRICi23621210. VBISinMed134228_4257.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000738 Genomic DNA. Translation: ABR59983.1.
RefSeqiWP_011975302.1. NC_009636.1.
YP_001326818.1. NC_009636.1.

3D structure databases

ProteinModelPortaliA6U8K3.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi366394.Smed_1132.

Proteomic databases

PRIDEiA6U8K3.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiABR59983; ABR59983; Smed_1132.
GeneIDi5321978.
KEGGismd:Smed_1132.
PATRICi23621210. VBISinMed134228_4257.

Phylogenomic databases

eggNOGiENOG4105CU7. Bacteria.
COG0264. LUCA.
HOGENOMiHOG000220987.
KOiK02357.
OMAiATYIHNA.
OrthoDBiPOG091H02HG.

Enzyme and pathway databases

BioCyciSMED366394:GJAL-1152-MONOMER.

Family and domain databases

Gene3Di3.30.479.20. 3 hits.
HAMAPiMF_00050. EF_Ts. 1 hit.
InterProiIPR001816. Transl_elong_EFTs/EF1B.
IPR014039. Transl_elong_EFTs/EF1B_dimer.
IPR018101. Transl_elong_Ts_CS.
IPR009060. UBA-like.
[Graphical view]
PANTHERiPTHR11741. PTHR11741. 1 hit.
PfamiPF00889. EF_TS. 1 hit.
[Graphical view]
SUPFAMiSSF46934. SSF46934. 1 hit.
SSF54713. SSF54713. 2 hits.
TIGRFAMsiTIGR00116. tsf. 1 hit.
PROSITEiPS01126. EF_TS_1. 1 hit.
PS01127. EF_TS_2. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiEFTS_SINMW
AccessioniPrimary (citable) accession number: A6U8K3
Entry historyi
Integrated into UniProtKB/Swiss-Prot: January 15, 2008
Last sequence update: August 21, 2007
Last modified: September 7, 2016
This is version 54 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome

Documents

  1. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.