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Protein
Submitted name:

Two component transcriptional regulator, winged helix family

Gene

Smed_0124

Organism
Sinorhizobium medicae (strain WSM419) (Ensifer medicae)
Status
Unreviewed-Annotation score: -Protein predictedi

Functioni

Regions

Feature keyPosition(s)DescriptionActionsGraphical viewLength
DNA bindingi129 – 227OmpR/PhoB-typePROSITE-ProRule annotationAdd BLAST99

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionDNA-bindingPROSITE-ProRule annotationSAAS annotation
Biological processTranscription, Transcription regulationSAAS annotation, Two-component regulatory systemSAAS annotation

Enzyme and pathway databases

BioCyciSMED366394:GJAL-126-MONOMER

Names & Taxonomyi

Protein namesi
Submitted name:
Two component transcriptional regulator, winged helix familyImported
Gene namesi
Ordered Locus Names:Smed_0124Imported
OrganismiSinorhizobium medicae (strain WSM419) (Ensifer medicae)Imported
Taxonomic identifieri366394 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRhizobialesRhizobiaceaeSinorhizobium/Ensifer groupSinorhizobium
Proteomesi
  • UP000001108 Componenti: Chromosome

Subcellular locationi

GO - Cellular componenti

PTM / Processingi

Amino acid modifications

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Modified residuei534-aspartylphosphatePROSITE-ProRule annotation1

Keywords - PTMi

PhosphoproteinPROSITE-ProRule annotation

Interactioni

Protein-protein interaction databases

STRINGi366394.Smed_0124

Structurei

3D structure databases

ProteinModelPortaliA6U5Q4
SMRiA6U5Q4
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini4 – 120Response regulatoryInterPro annotationAdd BLAST117
Domaini129 – 227OmpR/PhoB-typeInterPro annotationAdd BLAST99

Phylogenomic databases

eggNOGiENOG4105CK6 Bacteria
COG0745 LUCA
HOGENOMiHOG000034819
KOiK07657
OMAiIDRVWGS
OrthoDBiPOG091H02GJ

Family and domain databases

CDDicd00156 REC, 1 hit
cd00383 trans_reg_C, 1 hit
Gene3Di1.10.10.10, 1 hit
InterProiView protein in InterPro
IPR011006 CheY-like_superfamily
IPR001867 OmpR/PhoB-type_DNA-bd
IPR016032 Sig_transdc_resp-reg_C-effctor
IPR011879 Sig_transdc_resp-reg_PhoB
IPR001789 Sig_transdc_resp-reg_receiver
IPR036388 WH-like_DNA-bd_sf
PfamiView protein in Pfam
PF00072 Response_reg, 1 hit
PF00486 Trans_reg_C, 1 hit
SMARTiView protein in SMART
SM00448 REC, 1 hit
SM00862 Trans_reg_C, 1 hit
SUPFAMiSSF46894 SSF46894, 1 hit
SSF52172 SSF52172, 1 hit
TIGRFAMsiTIGR02154 PhoB, 1 hit
PROSITEiView protein in PROSITE
PS51755 OMPR_PHOB, 1 hit
PS50110 RESPONSE_REGULATORY, 1 hit

Sequencei

Sequence statusi: Complete.

A6U5Q4-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MLPKIAVVED EEALSVLLRY NLEAEGFEVD TILRGDEAEI RLQERLPDLL
60 70 80 90 100
ILDWMLPGVS GIELCRRLRQ RPETERLPII MLTARGEESE RVRGLATGAD
110 120 130 140 150
DYVVKPFSTP ELMARVKAML RRAKPEVLST LLRCGDIELD RETHRVHRRS
160 170 180 190 200
REVRLGPTEF RLLEFLMSSP GRVFSRSQLL DGVWGHDIYV DERTVDVHVG
210 220
RLRKALNFSN MPDVIRTVRG AGYSLES
Length:227
Mass (Da):26,018
Last modified:August 21, 2007 - v1
Checksum:i94714B79CA66ACE0
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000738 Genomic DNA Translation: ABR58984.1
RefSeqiWP_003530178.1, NC_009636.1
YP_001325819.1, NC_009636.1

Genome annotation databases

EnsemblBacteriaiABR58984; ABR58984; Smed_0124
GeneIDi5320953
KEGGismd:Smed_0124
PATRICifig|366394.8.peg.3182

Similar proteinsi

Entry informationi

Entry nameiA6U5Q4_SINMW
AccessioniPrimary (citable) accession number: A6U5Q4
Entry historyiIntegrated into UniProtKB/TrEMBL: August 21, 2007
Last sequence update: August 21, 2007
Last modified: May 23, 2018
This is version 74 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported

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