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A6U5Q4

- A6U5Q4_SINMW

UniProt

A6U5Q4 - A6U5Q4_SINMW

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Protein
Submitted name:

Two component transcriptional regulator, winged helix family

Gene

Smed_0124

Organism
Sinorhizobium medicae (strain WSM419) (Ensifer medicae)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi

Functioni

GO - Molecular functioni

  1. DNA binding Source: InterPro
  2. phosphorelay response regulator activity Source: InterPro

GO - Biological processi

  1. phosphate ion transport Source: InterPro
  2. regulation of transcription, DNA-templated Source: UniProtKB-KW
  3. transcription, DNA-templated Source: UniProtKB-KW
Complete GO annotation...

Keywords - Biological processi

Transcription, Transcription regulationSAAS annotation, Two-component regulatory systemSAAS annotation

Enzyme and pathway databases

BioCyciSMED366394:GJAL-126-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Two component transcriptional regulator, winged helix familyImported
Gene namesi
Ordered Locus Names:Smed_0124Imported
OrganismiSinorhizobium medicae (strain WSM419) (Ensifer medicae)Imported
Taxonomic identifieri366394 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRhizobialesRhizobiaceaeSinorhizobium/Ensifer groupSinorhizobium
ProteomesiUP000001108: Chromosome

PTM / Processingi

Keywords - PTMi

PhosphoproteinSAAS annotation

Interactioni

Protein-protein interaction databases

STRINGi366394.Smed_0124.

Structurei

3D structure databases

ProteinModelPortaliA6U5Q4.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Contains response regulatory domain.SAAS annotation

Phylogenomic databases

eggNOGiCOG0745.
HOGENOMiHOG000034819.
KOiK07657.
OMAiRIAICNI.
OrthoDBiEOG6G4VQG.

Family and domain databases

Gene3Di1.10.10.10. 1 hit.
InterProiIPR011006. CheY-like_superfamily.
IPR001867. Sig_transdc_resp-reg_C.
IPR016032. Sig_transdc_resp-reg_C-effctor.
IPR011879. Sig_transdc_resp-reg_PhoB.
IPR001789. Sig_transdc_resp-reg_receiver.
IPR011991. WHTH_DNA-bd_dom.
[Graphical view]
PfamiPF00072. Response_reg. 1 hit.
PF00486. Trans_reg_C. 1 hit.
[Graphical view]
SMARTiSM00448. REC. 1 hit.
SM00862. Trans_reg_C. 1 hit.
[Graphical view]
SUPFAMiSSF46894. SSF46894. 1 hit.
SSF52172. SSF52172. 1 hit.
TIGRFAMsiTIGR02154. PhoB. 1 hit.
PROSITEiPS50110. RESPONSE_REGULATORY. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

A6U5Q4 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MLPKIAVVED EEALSVLLRY NLEAEGFEVD TILRGDEAEI RLQERLPDLL
60 70 80 90 100
ILDWMLPGVS GIELCRRLRQ RPETERLPII MLTARGEESE RVRGLATGAD
110 120 130 140 150
DYVVKPFSTP ELMARVKAML RRAKPEVLST LLRCGDIELD RETHRVHRRS
160 170 180 190 200
REVRLGPTEF RLLEFLMSSP GRVFSRSQLL DGVWGHDIYV DERTVDVHVG
210 220
RLRKALNFSN MPDVIRTVRG AGYSLES
Length:227
Mass (Da):26,018
Last modified:August 21, 2007 - v1
Checksum:i94714B79CA66ACE0
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP000738 Genomic DNA. Translation: ABR58984.1.
RefSeqiYP_001325819.1. NC_009636.1.

Genome annotation databases

EnsemblBacteriaiABR58984; ABR58984; Smed_0124.
GeneIDi5320953.
KEGGismd:Smed_0124.
PATRICi23619025. VBISinMed134228_3182.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP000738 Genomic DNA. Translation: ABR58984.1 .
RefSeqi YP_001325819.1. NC_009636.1.

3D structure databases

ProteinModelPortali A6U5Q4.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 366394.Smed_0124.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai ABR58984 ; ABR58984 ; Smed_0124 .
GeneIDi 5320953.
KEGGi smd:Smed_0124.
PATRICi 23619025. VBISinMed134228_3182.

Phylogenomic databases

eggNOGi COG0745.
HOGENOMi HOG000034819.
KOi K07657.
OMAi RIAICNI.
OrthoDBi EOG6G4VQG.

Enzyme and pathway databases

BioCyci SMED366394:GJAL-126-MONOMER.

Family and domain databases

Gene3Di 1.10.10.10. 1 hit.
InterProi IPR011006. CheY-like_superfamily.
IPR001867. Sig_transdc_resp-reg_C.
IPR016032. Sig_transdc_resp-reg_C-effctor.
IPR011879. Sig_transdc_resp-reg_PhoB.
IPR001789. Sig_transdc_resp-reg_receiver.
IPR011991. WHTH_DNA-bd_dom.
[Graphical view ]
Pfami PF00072. Response_reg. 1 hit.
PF00486. Trans_reg_C. 1 hit.
[Graphical view ]
SMARTi SM00448. REC. 1 hit.
SM00862. Trans_reg_C. 1 hit.
[Graphical view ]
SUPFAMi SSF46894. SSF46894. 1 hit.
SSF52172. SSF52172. 1 hit.
TIGRFAMsi TIGR02154. PhoB. 1 hit.
PROSITEi PS50110. RESPONSE_REGULATORY. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. "Complete sequence of Sinorhizobium medicae WSM419 chromosome."
    US DOE Joint Genome Institute
    Copeland A., Lucas S., Lapidus A., Barry K., Glavina del Rio T., Dalin E., Tice H., Pitluck S., Chain P., Malfatti S., Shin M., Vergez L., Schmutz J., Larimer F., Land M., Hauser L., Kyrpides N., Mikhailova N., Reeve W.G., Richardson P.
    Submitted (JUN-2007) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: WSM419Imported.

Entry informationi

Entry nameiA6U5Q4_SINMW
AccessioniPrimary (citable) accession number: A6U5Q4
Entry historyi
Integrated into UniProtKB/TrEMBL: August 21, 2007
Last sequence update: August 21, 2007
Last modified: October 1, 2014
This is version 50 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported

External Data

Dasty 3