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A6U5Q4

- A6U5Q4_SINMW

UniProt

A6U5Q4 - A6U5Q4_SINMW

Protein
Submitted name:

Two component transcriptional regulator, winged helix family

Gene

Smed_0124

Organism
Sinorhizobium medicae (strain WSM419) (Ensifer medicae)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi
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    • History
      Entry version 50 (01 Oct 2014)
      Sequence version 1 (21 Aug 2007)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. DNA binding Source: InterPro
    2. phosphorelay response regulator activity Source: InterPro

    GO - Biological processi

    1. phosphate ion transport Source: InterPro
    2. regulation of transcription, DNA-templated Source: UniProtKB-KW
    3. transcription, DNA-templated Source: UniProtKB-KW

    Keywords - Biological processi

    Transcription, Transcription regulationSAAS annotation, Two-component regulatory systemSAAS annotation

    Enzyme and pathway databases

    BioCyciSMED366394:GJAL-126-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    Two component transcriptional regulator, winged helix familyImported
    Gene namesi
    Ordered Locus Names:Smed_0124Imported
    OrganismiSinorhizobium medicae (strain WSM419) (Ensifer medicae)Imported
    Taxonomic identifieri366394 [NCBI]
    Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRhizobialesRhizobiaceaeSinorhizobium/Ensifer groupSinorhizobium
    ProteomesiUP000001108: Chromosome

    PTM / Processingi

    Keywords - PTMi

    PhosphoproteinSAAS annotation

    Interactioni

    Protein-protein interaction databases

    STRINGi366394.Smed_0124.

    Structurei

    3D structure databases

    ProteinModelPortaliA6U5Q4.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Sequence similaritiesi

    Contains response regulatory domain.SAAS annotation

    Phylogenomic databases

    eggNOGiCOG0745.
    HOGENOMiHOG000034819.
    KOiK07657.
    OMAiRIAICNI.
    OrthoDBiEOG6G4VQG.

    Family and domain databases

    Gene3Di1.10.10.10. 1 hit.
    InterProiIPR011006. CheY-like_superfamily.
    IPR001867. Sig_transdc_resp-reg_C.
    IPR016032. Sig_transdc_resp-reg_C-effctor.
    IPR011879. Sig_transdc_resp-reg_PhoB.
    IPR001789. Sig_transdc_resp-reg_receiver.
    IPR011991. WHTH_DNA-bd_dom.
    [Graphical view]
    PfamiPF00072. Response_reg. 1 hit.
    PF00486. Trans_reg_C. 1 hit.
    [Graphical view]
    SMARTiSM00448. REC. 1 hit.
    SM00862. Trans_reg_C. 1 hit.
    [Graphical view]
    SUPFAMiSSF46894. SSF46894. 1 hit.
    SSF52172. SSF52172. 1 hit.
    TIGRFAMsiTIGR02154. PhoB. 1 hit.
    PROSITEiPS50110. RESPONSE_REGULATORY. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    A6U5Q4-1 [UniParc]FASTAAdd to Basket

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    MLPKIAVVED EEALSVLLRY NLEAEGFEVD TILRGDEAEI RLQERLPDLL    50
    ILDWMLPGVS GIELCRRLRQ RPETERLPII MLTARGEESE RVRGLATGAD 100
    DYVVKPFSTP ELMARVKAML RRAKPEVLST LLRCGDIELD RETHRVHRRS 150
    REVRLGPTEF RLLEFLMSSP GRVFSRSQLL DGVWGHDIYV DERTVDVHVG 200
    RLRKALNFSN MPDVIRTVRG AGYSLES 227
    Length:227
    Mass (Da):26,018
    Last modified:August 21, 2007 - v1
    Checksum:i94714B79CA66ACE0
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP000738 Genomic DNA. Translation: ABR58984.1.
    RefSeqiYP_001325819.1. NC_009636.1.

    Genome annotation databases

    EnsemblBacteriaiABR58984; ABR58984; Smed_0124.
    GeneIDi5320953.
    KEGGismd:Smed_0124.
    PATRICi23619025. VBISinMed134228_3182.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP000738 Genomic DNA. Translation: ABR58984.1 .
    RefSeqi YP_001325819.1. NC_009636.1.

    3D structure databases

    ProteinModelPortali A6U5Q4.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 366394.Smed_0124.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai ABR58984 ; ABR58984 ; Smed_0124 .
    GeneIDi 5320953.
    KEGGi smd:Smed_0124.
    PATRICi 23619025. VBISinMed134228_3182.

    Phylogenomic databases

    eggNOGi COG0745.
    HOGENOMi HOG000034819.
    KOi K07657.
    OMAi RIAICNI.
    OrthoDBi EOG6G4VQG.

    Enzyme and pathway databases

    BioCyci SMED366394:GJAL-126-MONOMER.

    Family and domain databases

    Gene3Di 1.10.10.10. 1 hit.
    InterProi IPR011006. CheY-like_superfamily.
    IPR001867. Sig_transdc_resp-reg_C.
    IPR016032. Sig_transdc_resp-reg_C-effctor.
    IPR011879. Sig_transdc_resp-reg_PhoB.
    IPR001789. Sig_transdc_resp-reg_receiver.
    IPR011991. WHTH_DNA-bd_dom.
    [Graphical view ]
    Pfami PF00072. Response_reg. 1 hit.
    PF00486. Trans_reg_C. 1 hit.
    [Graphical view ]
    SMARTi SM00448. REC. 1 hit.
    SM00862. Trans_reg_C. 1 hit.
    [Graphical view ]
    SUPFAMi SSF46894. SSF46894. 1 hit.
    SSF52172. SSF52172. 1 hit.
    TIGRFAMsi TIGR02154. PhoB. 1 hit.
    PROSITEi PS50110. RESPONSE_REGULATORY. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "Complete sequence of Sinorhizobium medicae WSM419 chromosome."
      US DOE Joint Genome Institute
      Copeland A., Lucas S., Lapidus A., Barry K., Glavina del Rio T., Dalin E., Tice H., Pitluck S., Chain P., Malfatti S., Shin M., Vergez L., Schmutz J., Larimer F., Land M., Hauser L., Kyrpides N., Mikhailova N., Reeve W.G., Richardson P.
      Submitted (JUN-2007) to the EMBL/GenBank/DDBJ databases
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: WSM419Imported.

    Entry informationi

    Entry nameiA6U5Q4_SINMW
    AccessioniPrimary (citable) accession number: A6U5Q4
    Entry historyi
    Integrated into UniProtKB/TrEMBL: August 21, 2007
    Last sequence update: August 21, 2007
    Last modified: October 1, 2014
    This is version 50 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteomeImported

    External Data

    Dasty 3