A6U5Q4 (A6U5Q4_SINMW) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Two component transcriptional regulator, winged helix family EMBL ABR58984.1

Gene names

Ordered Locus Names:

Smed_0124 EMBL ABR58984.1

Organism

Sinorhizobium medicae (strain WSM419) (Ensifer medicae) [Complete proteome] [HAMAP] EMBL ABR58984.1

Taxonomic identifier

366394 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Proteobacteria › Alphaproteobacteria › Rhizobiales › Rhizobiaceae › Sinorhizobium/Ensifer group › Sinorhizobium › Sinorhizobium medicae

Protein attributes

Sequence length	227 AA.
Sequence status	Complete.
Protein existence	Predicted

General annotation (Comments)

Sequence similarities

Contains 1 response regulatory domain. SAAS SAAS016032

Ontologies

Keywords
Biological process	Transcription Transcription regulation SAAS SAAS016032 Two-component regulatory system SAAS SAAS001867
Ligand	DNA-binding SAAS SAAS016032
PTM	Phosphoprotein SAAS SAAS016032
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	intracellular signal transduction Inferred from electronic annotation. Source: GOC phosphate ion transport Inferred from electronic annotation. Source: InterPro regulation of transcription, DNA-dependent Inferred from electronic annotation. Source: UniProtKB-KW transcription, DNA-dependent Inferred from electronic annotation. Source: UniProtKB-KW
Cellular_component	intracellular Inferred from electronic annotation. Source: InterPro
Molecular_function	DNA binding Inferred from electronic annotation. Source: UniProtKB-KW phosphorelay response regulator activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	A6U5Q4 [UniParc]. Last modified August 21, 2007. Version 1. Checksum: 94714B79CA66ACE0	FASTA	227	26,018
	10 20 30 40 50 60 MLPKIAVVED EEALSVLLRY NLEAEGFEVD TILRGDEAEI RLQERLPDLL ILDWMLPGVS 70 80 90 100 110 120 GIELCRRLRQ RPETERLPII MLTARGEESE RVRGLATGAD DYVVKPFSTP ELMARVKAML 130 140 150 160 170 180 RRAKPEVLST LLRCGDIELD RETHRVHRRS REVRLGPTEF RLLEFLMSSP GRVFSRSQLL 190 200 210 220 DGVWGHDIYV DERTVDVHVG RLRKALNFSN MPDVIRTVRG AGYSLES

References

[1]

"Complete sequence of Sinorhizobium medicae WSM419 chromosome." US DOE Joint Genome Institute Copeland A., Lucas S., Lapidus A., Barry K., Glavina del Rio T., Dalin E., Tice H., Pitluck S., Chain P., Malfatti S., Shin M., Vergez L., Schmutz J., Larimer F., Land M., Hauser L., Kyrpides N., Mikhailova N., Reeve W.G., Richardson P. Submitted (JUN-2007) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: WSM419.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000738 Genomic DNA. Translation: ABR58984.1.
RefSeq	YP_001325819.1. NC_009636.1.
3D structure databases
ProteinModelPortal	A6U5Q4.
ModBase	Search...
Protein-protein interaction databases
STRING	366394.Smed_0124.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	ABR58984; ABR58984; Smed_0124.
GeneID	5320953.
KEGG	smd:Smed_0124.
PATRIC	23619025. VBISinMed134228_3182.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG0745.
HOGENOM	HOG000034819.
KO	K07657.
OMA	RIAICNI.
ProtClustDB	CLSK881438.
Enzyme and pathway databases
BioCyc	SMED366394:GJAL-126-MONOMER.
Family and domain databases
Gene3D	1.10.10.10. 1 hit.
InterPro	IPR011006. CheY-like_superfamily. IPR001867. Sig_transdc_resp-reg_C. IPR016032. Sig_transdc_resp-reg_C-effctor. IPR011879. Sig_transdc_resp-reg_PhoB. IPR001789. Sig_transdc_resp-reg_receiver. IPR011991. WHTH_DNA-bd_dom. [Graphical view]
Pfam	PF00072. Response_reg. 1 hit. PF00486. Trans_reg_C. 1 hit. [Graphical view]
SMART	SM00448. REC. 1 hit. SM00862. Trans_reg_C. 1 hit. [Graphical view]
SUPFAM	SSF46894. Bipartite_resp_reg_C-effector. 1 hit. SSF52172. CheY_like. 1 hit.
TIGRFAMs	TIGR02154. PhoB. 1 hit.
PROSITE	PS50110. RESPONSE_REGULATORY. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

A6U5Q4_SINMW

Accession

Primary (citable) accession number: A6U5Q4

Entry history

Integrated into UniProtKB/TrEMBL:	August 21, 2007
Last sequence update:	August 21, 2007
Last modified:	May 1, 2013
This is version 43 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)