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A6U5Q4 (A6U5Q4_SINMW) Unreviewed, UniProtKB/TrEMBL

Last modified April 16, 2014. Version 48. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Ordered Locus Names:Smed_0124 EMBL ABR58984.1
OrganismSinorhizobium medicae (strain WSM419) (Ensifer medicae) [Complete proteome] [HAMAP] EMBL ABR58984.1
Taxonomic identifier366394 [NCBI]
Taxonomic lineageBacteriaProteobacteriaAlphaproteobacteriaRhizobialesRhizobiaceaeSinorhizobium/Ensifer groupSinorhizobium

Protein attributes

Sequence length227 AA.
Sequence statusComplete.
Protein existencePredicted

General annotation (Comments)

Sequence similarities

Contains response regulatory domain. SAAS SAAS001867

Sequences

Sequence LengthMass (Da)Tools
A6U5Q4 [UniParc].

Last modified August 21, 2007. Version 1.
Checksum: 94714B79CA66ACE0

FASTA22726,018
        10         20         30         40         50         60 
MLPKIAVVED EEALSVLLRY NLEAEGFEVD TILRGDEAEI RLQERLPDLL ILDWMLPGVS 

        70         80         90        100        110        120 
GIELCRRLRQ RPETERLPII MLTARGEESE RVRGLATGAD DYVVKPFSTP ELMARVKAML 

       130        140        150        160        170        180 
RRAKPEVLST LLRCGDIELD RETHRVHRRS REVRLGPTEF RLLEFLMSSP GRVFSRSQLL 

       190        200        210        220 
DGVWGHDIYV DERTVDVHVG RLRKALNFSN MPDVIRTVRG AGYSLES 

« Hide

References

[1]"Complete sequence of Sinorhizobium medicae WSM419 chromosome."
US DOE Joint Genome Institute
Copeland A., Lucas S., Lapidus A., Barry K., Glavina del Rio T., Dalin E., Tice H., Pitluck S., Chain P., Malfatti S., Shin M., Vergez L., Schmutz J., Larimer F., Land M., Hauser L., Kyrpides N., Mikhailova N., Reeve W.G., Richardson P.
Submitted (JUN-2007) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: WSM419.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP000738 Genomic DNA. Translation: ABR58984.1.
RefSeqYP_001325819.1. NC_009636.1.

3D structure databases

ProteinModelPortalA6U5Q4.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING366394.Smed_0124.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaABR58984; ABR58984; Smed_0124.
GeneID5320953.
KEGGsmd:Smed_0124.
PATRIC23619025. VBISinMed134228_3182.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0745.
HOGENOMHOG000034819.
KOK07657.
OMAKIGPTEF.
OrthoDBEOG6G4VQG.
ProtClustDBCLSK881438.

Enzyme and pathway databases

BioCycSMED366394:GJAL-126-MONOMER.

Family and domain databases

Gene3D1.10.10.10. 1 hit.
InterProIPR011006. CheY-like_superfamily.
IPR001867. Sig_transdc_resp-reg_C.
IPR016032. Sig_transdc_resp-reg_C-effctor.
IPR011879. Sig_transdc_resp-reg_PhoB.
IPR001789. Sig_transdc_resp-reg_receiver.
IPR011991. WHTH_DNA-bd_dom.
[Graphical view]
PfamPF00072. Response_reg. 1 hit.
PF00486. Trans_reg_C. 1 hit.
[Graphical view]
SMARTSM00448. REC. 1 hit.
SM00862. Trans_reg_C. 1 hit.
[Graphical view]
SUPFAMSSF46894. SSF46894. 1 hit.
SSF52172. SSF52172. 1 hit.
TIGRFAMsTIGR02154. PhoB. 1 hit.
PROSITEPS50110. RESPONSE_REGULATORY. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameA6U5Q4_SINMW
AccessionPrimary (citable) accession number: A6U5Q4
Entry history
Integrated into UniProtKB/TrEMBL: August 21, 2007
Last sequence update: August 21, 2007
Last modified: April 16, 2014
This is version 48 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)