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A6TUP7 (A6TUP7_ALKMQ) Unreviewed, UniProtKB/TrEMBL

Last modified June 11, 2014. Version 48. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Protein attributes

Sequence length437 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Catalytic activity

D-xylopyranose = D-xylulose. HAMAP-Rule MF_00455 RuleBase RU000609 SAAS SAAS001998

Cofactor

Binds 2 magnesium ions per subunit By similarity. HAMAP-Rule MF_00455

Subunit structure

Homotetramer By similarity. HAMAP-Rule MF_00455 SAAS SAAS001998

Subcellular location

Cytoplasm By similarity HAMAP-Rule MF_00455 SAAS SAAS001998.

Sequence similarities

Belongs to the xylose isomerase family. HAMAP-Rule MF_00455 RuleBase RU000609

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Sites

Active site1001 By similarity HAMAP-Rule MF_00455
Active site1031 By similarity HAMAP-Rule MF_00455
Metal binding2311Magnesium 1 By similarity HAMAP-Rule MF_00455
Metal binding2671Magnesium 1 By similarity HAMAP-Rule MF_00455
Metal binding2671Magnesium 2 By similarity HAMAP-Rule MF_00455
Metal binding2701Magnesium 2 By similarity HAMAP-Rule MF_00455
Metal binding2951Magnesium 1 By similarity HAMAP-Rule MF_00455
Metal binding3061Magnesium 2 By similarity HAMAP-Rule MF_00455
Metal binding3081Magnesium 2 By similarity HAMAP-Rule MF_00455
Metal binding3381Magnesium 1 By similarity HAMAP-Rule MF_00455

Sequences

Sequence LengthMass (Da)Tools
A6TUP7 [UniParc].

Last modified August 21, 2007. Version 1.
Checksum: EF052ED533C62143

FASTA43749,449
        10         20         30         40         50         60 
MREHFLEINK IKFEGGDSTN PLAFKYYDAN RIVAGKKMKD HLRFALSYWH TLTGNGTDPF 

        70         80         90        100        110        120 
GQPTMERDYN SLDGIELSKA RVDAAFELMT KLGIEFFCFH DLDIAPEGNS LQEKLDNLDT 

       130        140        150        160        170        180 
ILERIEDKMK ETGIKCLWGT TNAFSHPRFM HGAATSPNAD VFAFAAAQVK KALEITHRLR 

       190        200        210        220        230        240 
GENYVFWGGR EGYETLLNTD IALENDNLAK FLKMAKDYAR NIGFEGQFLI EPKPKEPTKH 

       250        260        270        280        290        300 
QYDFDTMTVL GFLRKYNLID DFKLNIEANH ATLAGHTFQH ELAMARINGV LGSVDANQGD 

       310        320        330        340        350        360 
LLLGWDTDQF PTNIYDATLS MYEVLKNGGI APGGLNFDAK VRRGSFKPDD LFIAYIVGMD 

       370        380        390        400        410        420 
TFAKGLLVAD KLLTDGVLEN FVTKRYESYT AGIGKKIIED ATSFEELAEY ALKHDKIVLE 

       430 
SGRQEMLEDI VNRYIYK 

« Hide

References

[1]"Complete sequence of Alkaliphilus metalliredigens QYMF."
Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina del Rio T., Hammon N., Israni S., Dalin E., Tice H., Pitluck S., Chertkov O., Brettin T., Bruce D., Han C., Schmutz J., Larimer F., Land M. expand/collapse author list , Hauser L., Kyrpides N., Mikhailova N., Ye Q., Zhou J., Fields M., Richardson P.
Submitted (JUN-2007) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: QYMF.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP000724 Genomic DNA. Translation: ABR49915.1.
RefSeqYP_001321574.1. NC_009633.1.

3D structure databases

ProteinModelPortalA6TUP7.
SMRA6TUP7. Positions 3-437.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING293826.Amet_3796.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaABR49915; ABR49915; Amet_3796.
GeneID5313877.
KEGGamt:Amet_3796.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG2115.
HOGENOMHOG000252293.
KOK01805.
OMAVINERYS.
OrthoDBEOG62NX4R.

Enzyme and pathway databases

BioCycAMET293826:GI5P-3850-MONOMER.

Family and domain databases

Gene3D3.20.20.150. 1 hit.
HAMAPMF_00455. Xylose_isom_A.
InterProIPR013022. Xyl_isomerase-like_TIM-brl.
IPR013452. Xylose_isom_bac.
IPR001998. Xylose_isomerase.
[Graphical view]
PfamPF01261. AP_endonuc_2. 1 hit.
[Graphical view]
PRINTSPR00688. XYLOSISMRASE.
SUPFAMSSF51658. SSF51658. 1 hit.
TIGRFAMsTIGR02630. xylose_isom_A. 1 hit.
PROSITEPS51415. XYLOSE_ISOMERASE. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameA6TUP7_ALKMQ
AccessionPrimary (citable) accession number: A6TUP7
Entry history
Integrated into UniProtKB/TrEMBL: August 21, 2007
Last sequence update: August 21, 2007
Last modified: June 11, 2014
This is version 48 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)