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A6TSC8 (GLGA_ALKMQ) Reviewed, UniProtKB/Swiss-Prot

Last modified May 14, 2014. Version 40. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (2) | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order

Names and origin

Protein namesRecommended name:
Glycogen synthase

EC=2.4.1.21
Alternative name(s):
Starch [bacterial glycogen] synthase
Gene names
Name:glgA
Ordered Locus Names:Amet_2946
OrganismAlkaliphilus metalliredigens (strain QYMF) [Complete proteome] [HAMAP]
Taxonomic identifier293826 [NCBI]
Taxonomic lineageBacteriaFirmicutesClostridiaClostridialesClostridiaceaeAlkaliphilus

Protein attributes

Sequence length475 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Function

Synthesizes alpha-1,4-glucan chains using ADP-glucose By similarity. HAMAP-Rule MF_00484

Catalytic activity

ADP-glucose + (1,4-alpha-D-glucosyl)(n) = ADP + (1,4-alpha-D-glucosyl)(n+1). HAMAP-Rule MF_00484

Pathway

Glycan biosynthesis; glycogen biosynthesis. HAMAP-Rule MF_00484

Sequence similarities

Belongs to the glycosyltransferase 1 family. Bacterial/plant glycogen synthase subfamily.

Ontologies

Keywords
   Biological processGlycogen biosynthesis
   Molecular functionGlycosyltransferase
Transferase
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processglycogen biosynthetic process

Inferred from electronic annotation. Source: UniProtKB-HAMAP

   Molecular_functionstarch synthase activity

Inferred from electronic annotation. Source: UniProtKB-HAMAP

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 475475Glycogen synthase HAMAP-Rule MF_00484
PRO_1000060429

Sites

Binding site151ADP-glucose By similarity

Sequences

Sequence LengthMass (Da)Tools
A6TSC8 [UniParc].

Last modified August 21, 2007. Version 1.
Checksum: 3161656D6BB1A7B5

FASTA47554,590
        10         20         30         40         50         60 
MRVMFAASEA TPFSKSGGLG DVIGSLPFYL KKLGVDVSVI LPKYQEIPQD LKMKMKWIKS 

        70         80         90        100        110        120 
MTVPVGWRNQ FCGIEILSYK DIHFYFVDNQ YYFNREGFYG HNDDGERFAF FSRSVLEILP 

       130        140        150        160        170        180 
HIDCKPDIIH CHDWQTAMIS YLLKTQYQHH GFYKNIKTVF TIHNLKYQGV FPQEVLGDLF 

       190        200        210        220        230        240 
NGSQQHFNEG GVEYHGNVNY MKGGLNFSDY ITTVSPTYAQ EIQDPFFGEG LEGVLSRKKK 

       250        260        270        280        290        300 
QLQGVTNGID DSVYNPQTDI HLFKNFSSEN LRNKKDNKLG LQERLNLAVD AKIPMIGMVT 

       310        320        330        340        350        360 
RLVEQKGLDL VANQLEKLME EEIQLVVLGT GDHQYEEIFR QAAIKYPERI STNLFFDEVL 

       370        380        390        400        410        420 
AQQIYGGSDF FLMPSLFEPC GLGQLIALRY GTVPIVRETG GLKDTIQYYD EVSKEGNGFT 

       430        440        450        460        470 
FTNYNAHDMF NTIKEAIRLY PDKRKFNKVV RNAMNTKVGW EESAKTYLKL YRSLG 

« Hide

References

[1]"Complete sequence of Alkaliphilus metalliredigens QYMF."
Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina del Rio T., Hammon N., Israni S., Dalin E., Tice H., Pitluck S., Chertkov O., Brettin T., Bruce D., Han C., Schmutz J., Larimer F., Land M. expand/collapse author list , Hauser L., Kyrpides N., Mikhailova N., Ye Q., Zhou J., Fields M., Richardson P.
Submitted (JUN-2007) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: QYMF.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP000724 Genomic DNA. Translation: ABR49096.1.
RefSeqYP_001320755.1. NC_009633.1.

3D structure databases

ProteinModelPortalA6TSC8.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING293826.Amet_2946.

Protein family/group databases

CAZyGT5. Glycosyltransferase Family 5.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaABR49096; ABR49096; Amet_2946.
GeneID5313020.
KEGGamt:Amet_2946.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0297.
HOGENOMHOG000294940.
KOK00703.
OMADFSWERS.
OrthoDBEOG6JTC6Z.

Enzyme and pathway databases

BioCycAMET293826:GI5P-2993-MONOMER.
UniPathwayUPA00164.

Family and domain databases

HAMAPMF_00484. Glycogen_synth.
InterProIPR001296. Glyco_trans_1.
IPR011835. Glycogen/starch_synth.
IPR013534. Starch_synth_cat_dom.
[Graphical view]
PfamPF08323. Glyco_transf_5. 1 hit.
PF00534. Glycos_transf_1. 1 hit.
[Graphical view]
TIGRFAMsTIGR02095. glgA. 1 hit.
ProtoNetSearch...

Entry information

Entry nameGLGA_ALKMQ
AccessionPrimary (citable) accession number: A6TSC8
Entry history
Integrated into UniProtKB/Swiss-Prot: February 5, 2008
Last sequence update: August 21, 2007
Last modified: May 14, 2014
This is version 40 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Relevant documents

SIMILARITY comments

Index of protein domains and families

PATHWAY comments

Index of metabolic and biosynthesis pathways