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A6TJI5 (A6TJI5_ALKMQ) Unreviewed, UniProtKB/TrEMBL

Last modified January 25, 2012. Version 25. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesSubmitted name:
Hydrolase, TatD family EMBL ABR46353.1
Gene names
Ordered Locus Names:Amet_0111
OrganismAlkaliphilus metalliredigens (strain QYMF) [Complete proteome] [HAMAP]
Taxonomic identifier293826 [NCBI]
Taxonomic lineageBacteria › Firmicutes › Clostridia › Clostridiales › Clostridiaceae › Alkaliphilus

Protein attributes

Sequence length255 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Keywords
   Molecular functionHydrolase EMBL ABR46353.1
   Technical termComplete proteome
Gene Ontology (GO)
   Molecular functionendodeoxyribonuclease activity, producing 5'-phosphomonoesters

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
A6TJI5 [UniParc].

Last modified August 21, 2007. Version 1.
Checksum: 8AE112104ABC4B75

FASTA25528,781
        10         20         30         40         50         60 
MLFDSHAHID GGRFDQDRHQ MIENAKTNGV SYILNPGADL STSVKAVNLA EKYDCVYAAV 

        70         80         90        100        110        120 
GVHPHDVKDM DEDTIEILRS LTNNKNVKAI GEIGLDFHYD HSPRDVQRKW FKKQVELAKE 

       130        140        150        160        170        180 
LQLPMIIHDR DAHGEVFEIL KEHNAGEFGC VMHCYSGSIE LAQEYIKLGI YISLAGPVTF 

       190        200        210        220        230        240 
NNAKKTYEVA QGIPLEWLLV ETDSPYLTPV PYRGKRNEPA YVKHVADKIA EAKGISFEEV 

       250 
ARQTTKNAKR LFGIK

« Hide

References

[1]"Complete sequence of Alkaliphilus metalliredigens QYMF."
Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina del Rio T., Hammon N., Israni S., Dalin E., Tice H., Pitluck S., Chertkov O., Brettin T., Bruce D., Han C., Schmutz J., Larimer F., Land M. expand/collapse author list , Hauser L., Kyrpides N., Mikhailova N., Ye Q., Zhou J., Fields M., Richardson P.
Submitted (JUN-2007) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: QYMF.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CP000724 Genomic DNA. Translation: ABR46353.1.
RefSeqYP_001318012.1. NC_009633.1.

3D structure databases

ProteinModelPortalA6TJI5.
ModBaseSearch...

Protein-protein interaction databases

STRINGA6TJI5.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID5310154.
GenomeReviewsGene locus Amet_0111 in contig CP000724_GR.
KEGGamt:Amet_0111.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0084.
HOGENOMHBG629833.
OMALPLVIHT.
ProtClustDBCLSK965123.

Family and domain databases

InterProIPR012278. DNase_TatD.
IPR018228. DNase_TatD-rel_CS.
IPR015991. DNase_TatD_bac-type.
IPR001130. TatD_superfamily.
[Graphical view]
KOK03424.
PANTHERPTHR10060. TatD_DNase. 1 hit.
PfamPF01026. TatD_DNase. 1 hit.
[Graphical view]
PIRSFPIRSF005902. DNase_TatD. 1 hit.
TIGRFAMsTIGR00010. TIGR00010. 1 hit.
PROSITEPS01137. TATD_1. 1 hit.
PS01091. TATD_3. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameA6TJI5_ALKMQ
AccessionPrimary (citable) accession number: A6TJI5
Entry history
Integrated into UniProtKB/TrEMBL: August 21, 2007
Last sequence update: August 21, 2007
Last modified: January 25, 2012
This is version 25 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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