A6SX62 (A6SX62_JANMA) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
RNA pseudouridylate synthase EMBL ABR90117.1
EC=4.2.1.70 EMBL ABR90117.1

Gene names

Ordered Locus Names:

mma_1169

Organism

Janthinobacterium sp. (strain Marseille) (Minibacterium massiliensis) [Complete proteome] [HAMAP] EMBL ABR90117.1

Taxonomic identifier

375286 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Proteobacteria › Betaproteobacteria › Burkholderiales › Oxalobacteraceae › Janthinobacterium

Protein attributes

Sequence length	237 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Molecular function	Lyase EMBL ABR90117.1
Technical term	Complete proteome
Gene Ontology (GO)
Molecular_function	RNA binding Inferred from electronic annotation. Source: InterPro pseudouridine synthase activity Inferred from electronic annotation. Source: InterPro pseudouridylate synthase activity Inferred from electronic annotation. Source: EC
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	A6SX62 [UniParc]. Last modified August 21, 2007. Version 1. Checksum: 50227B44F27433FE	FASTA	237	26,154
	10 20 30 40 50 60 MVDSIRLSKR VAEALACSRR EAEQYIEGGW VSVDGKVIEE PGHRVDPQQA IVLSPDATLV 70 80 90 100 110 120 AVDPVTILLH KPAGMDAAAA LQCITPENLY AEDRSGIRFL KKHTVDLKPT DSLESLASGL 130 140 150 160 170 180 LVFTQDWHVA RKLVDDAAGI EQEYIAEVSG TLVANGLALL NHGLSMNRKP LAPVKVSWQN 190 200 210 220 230 ETRLRFAGKG IQRGQIPYMC EQVGLTLVGL KRIRMARMPM AALPVGQWRY LKGYERF

References

[1]

"Genome analysis of Minibacterium massiliensis highlights the convergent evolution of water-living bacteria." Audic S., Robert C., Campagna B., Parinello H., Claverie J.-M., Raoult D., Drancourt M. PLoS Genet. 3:1454-1463(2007) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: Marseille.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000269 Genomic DNA. Translation: ABR90117.1.
RefSeq	YP_001352859.1. NC_009659.1.
3D structure databases
ProteinModelPortal	A6SX62.
ModBase	Search...
Protein-protein interaction databases
STRING	375286.mma_1169.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	ABR90117; ABR90117; mma_1169.
GeneID	5350986.
KEGG	mms:mma_1169.
PATRIC	22154783. VBIJanSp106498_1175.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG1187.
HOGENOM	HOG000044956.
KO	K06182.
OMA	GGWVTVD.
ProtClustDB	CLSK966854.
Enzyme and pathway databases
BioCyc	JSP375286:GJ8U-1191-MONOMER.
Family and domain databases
Gene3D	3.10.290.10. 1 hit.
InterPro	IPR020103. PsdUridine_synth_cat_dom. IPR002942. S4_RNA-bd. [Graphical view]
Pfam	PF01479. S4. 1 hit. [Graphical view]
SMART	SM00363. S4. 1 hit. [Graphical view]
SUPFAM	SSF55120. PsdUridine_synth_cat_dom. 1 hit.
PROSITE	PS50889. S4. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

A6SX62_JANMA

Accession

Primary (citable) accession number: A6SX62

Entry history

Integrated into UniProtKB/TrEMBL:	August 21, 2007
Last sequence update:	August 21, 2007
Last modified:	May 1, 2013
This is version 30 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)