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Protein

39S ribosomal protein L1, mitochondrial

Gene

MRPL1

Organism
Bos taurus (Bovine)
Status
Reviewed-Annotation score: Annotation score: 3 out of 5-Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

Ribonucleoprotein, Ribosomal protein

Enzyme and pathway databases

ReactomeiR-BTA-5368286. Mitochondrial translation initiation.
R-BTA-5389840. Mitochondrial translation elongation.
R-BTA-5419276. Mitochondrial translation termination.

Names & Taxonomyi

Protein namesi
Recommended name:
39S ribosomal protein L1, mitochondrial
Short name:
L1mt
Short name:
MRP-L1
Gene namesi
Name:MRPL1
OrganismiBos taurus (Bovine)
Taxonomic identifieri9913 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaLaurasiatheriaCetartiodactylaRuminantiaPecoraBovidaeBovinaeBos
Proteomesi
  • UP000009136 Componenti: Chromosome 6

Subcellular locationi

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

Mitochondrion

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Transit peptidei1 – 50MitochondrionSequence analysisAdd BLAST50
ChainiPRO_000036574151 – 32539S ribosomal protein L1, mitochondrialAdd BLAST275

Proteomic databases

PaxDbiA6QPQ5.

Expressioni

Gene expression databases

BgeeiENSBTAG00000018360.

Interactioni

Protein-protein interaction databases

STRINGi9913.ENSBTAP00000042782.

Structurei

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
PDB entryMethodResolution (Å)ChainPositionsPDBsum
2FTCelectron microscopy-A123-311[»]
ProteinModelPortaliA6QPQ5.
SMRiA6QPQ5.
ModBaseiSearch...
MobiDBiSearch...

Miscellaneous databases

EvolutionaryTraceiA6QPQ5.

Family & Domainsi

Sequence similaritiesi

Belongs to the ribosomal protein L1P family.Curated

Keywords - Domaini

Transit peptide

Phylogenomic databases

eggNOGiKOG1569. Eukaryota.
COG0081. LUCA.
GeneTreeiENSGT00390000003587.
HOGENOMiHOG000293225.
HOVERGENiHBG061212.
InParanoidiA6QPQ5.
KOiK02863.
OMAiRADKHVD.
OrthoDBiEOG091G0CV1.
TreeFamiTF314989.

Family and domain databases

CDDicd00403. Ribosomal_L1. 1 hit.
Gene3Di3.30.190.20. 2 hits.
3.40.50.790. 1 hit.
InterProiIPR023674. Ribosomal_L1-like.
IPR028364. Ribosomal_L1/biogenesis.
IPR016094. Ribosomal_L1_2-a/b-sand.
IPR016095. Ribosomal_L1_3-a/b-sand.
IPR005879. Ribosomal_L1_mit.
[Graphical view]
PfamiPF00687. Ribosomal_L1. 1 hit.
[Graphical view]
SUPFAMiSSF56808. SSF56808. 1 hit.
TIGRFAMsiTIGR01170. rplA_mito. 1 hit.

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

A6QPQ5-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MAATVRCFGR VLIHHQRCSL ATVTSQTSLY PCCIYVPVPN RHFAAAAKPA
60 70 80 90 100
KKTKKGTKEK ASNEKKDDIE KIKSYPFMEG EPEDDVYLKR LYPRQIYEVE
110 120 130 140 150
KAVNLLKKFQ VLDFTNPKQG VYLDLTLDMT LGKKKKVEPF ASVLSLPYPF
160 170 180 190 200
ISEMSKVAVF TGNASEIKIA EENGAAFAGG TNLIQKILDD EIQADFYIAV
210 220 230 240 250
PEIMPELNPL RKKLKTRFPK FNRNSVGRDI PKMLELFKTG LEIKVDEERE
260 270 280 290 300
NFLETKIATL DMPSDQIAAN LQAVINEVCR QRPLNLGPFV VRAFLRSSTS
310 320
EGLLLKIEPL LPKEGETKES DKKAV
Length:325
Mass (Da):36,657
Last modified:August 21, 2007 - v1
Checksum:i0A3849411D4D1BF8
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BC149433 mRNA. Translation: AAI49434.1.
RefSeqiNP_001095314.1. NM_001101844.2.
UniGeneiBt.66027.

Genome annotation databases

EnsembliENSBTAT00000045390; ENSBTAP00000042782; ENSBTAG00000018360.
GeneIDi504835.
KEGGibta:504835.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BC149433 mRNA. Translation: AAI49434.1.
RefSeqiNP_001095314.1. NM_001101844.2.
UniGeneiBt.66027.

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
PDB entryMethodResolution (Å)ChainPositionsPDBsum
2FTCelectron microscopy-A123-311[»]
ProteinModelPortaliA6QPQ5.
SMRiA6QPQ5.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi9913.ENSBTAP00000042782.

Proteomic databases

PaxDbiA6QPQ5.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENSBTAT00000045390; ENSBTAP00000042782; ENSBTAG00000018360.
GeneIDi504835.
KEGGibta:504835.

Organism-specific databases

CTDi65008.

Phylogenomic databases

eggNOGiKOG1569. Eukaryota.
COG0081. LUCA.
GeneTreeiENSGT00390000003587.
HOGENOMiHOG000293225.
HOVERGENiHBG061212.
InParanoidiA6QPQ5.
KOiK02863.
OMAiRADKHVD.
OrthoDBiEOG091G0CV1.
TreeFamiTF314989.

Enzyme and pathway databases

ReactomeiR-BTA-5368286. Mitochondrial translation initiation.
R-BTA-5389840. Mitochondrial translation elongation.
R-BTA-5419276. Mitochondrial translation termination.

Miscellaneous databases

EvolutionaryTraceiA6QPQ5.

Gene expression databases

BgeeiENSBTAG00000018360.

Family and domain databases

CDDicd00403. Ribosomal_L1. 1 hit.
Gene3Di3.30.190.20. 2 hits.
3.40.50.790. 1 hit.
InterProiIPR023674. Ribosomal_L1-like.
IPR028364. Ribosomal_L1/biogenesis.
IPR016094. Ribosomal_L1_2-a/b-sand.
IPR016095. Ribosomal_L1_3-a/b-sand.
IPR005879. Ribosomal_L1_mit.
[Graphical view]
PfamiPF00687. Ribosomal_L1. 1 hit.
[Graphical view]
SUPFAMiSSF56808. SSF56808. 1 hit.
TIGRFAMsiTIGR01170. rplA_mito. 1 hit.
ProtoNetiSearch...

Entry informationi

Entry nameiRM01_BOVIN
AccessioniPrimary (citable) accession number: A6QPQ5
Entry historyi
Integrated into UniProtKB/Swiss-Prot: March 3, 2009
Last sequence update: August 21, 2007
Last modified: November 2, 2016
This is version 59 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

3D-structure, Complete proteome, Reference proteome

Documents

  1. PDB cross-references
    Index of Protein Data Bank (PDB) cross-references
  2. Ribosomal proteins
    Ribosomal proteins families and list of entries
  3. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.