Unreviewed, UniProtKB/TrEMBL A6QLX6 (A6QLX6_BOVIN)

Names and origin

Protein names

Submitted name:
    GALNT12 protein EMBL AAI48122.1

Gene names

Name:

GALNT12 EMBL AAI48122.1

Organism

Bos taurus (Bovine) EMBL AAI48122.1

Taxonomic identifier

9913 [NCBI]

Taxonomic lineage

Eukaryota › Metazoa › Chordata › Craniata › Vertebrata › Euteleostomi › Mammalia › Eutheria › Laurasiatheria › Cetartiodactyla › Ruminantia › Pecora › Bovidae › Bovinae › Bos

Protein attributes

Sequence length	579 AA.
Sequence status	Complete.
Sequence processing	The displayed sequence is not processed.
Protein existence	Evidence at transcript level.

General annotation (Comments)

Pathway	Protein modification; protein glycosylation. Spearmint SPM000772
Sequence similarities	Contains 1 ricin B-type lectin domain. Spearmint SPM000772

Ontologies

Keywords
Cellular component	Golgi apparatus Spearmint SPM000772 Membrane
Domain	Transmembrane Spearmint SPM000772
Ligand	Calcium Spearmint SPM000772 Lectin Spearmint SPM000772 Manganese Spearmint SPM000772
Molecular function	Glycosyltransferase Spearmint SPM000772 RuleBase RU003687V0 Transferase
Gene Ontology (GO)
Cellular component	Golgi apparatus Inferred from electronic annotation. Source: UniProtKB-KW integral to membrane Inferred from electronic annotation. Source: UniProtKB-KW
Molecular function	calcium ion binding Inferred from electronic annotation. Source: UniProtKB-KW manganese ion binding Inferred from electronic annotation. Source: UniProtKB-KW sugar binding Inferred from electronic annotation. Source: UniProtKB-KW transferase activity, transferring glycosyl groups Inferred from electronic annotation. Source: UniProtKB-KW
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	A6QLX6-1 [UniParc]. Last modified August 21, 2007. Version 1. Checksum: 21D480B89F4FDAFF	FASTA	579	66,725
	10 20 30 40 50 60 MLGRAARRRC PRGLRRGREA LLALLALLAL AGLASVLRAR RGAGAAEPGL RRTQRSGRRD 70 80 90 100 110 120 PVLPRPPVPE DALGAHGEAV RLQLQGEELR LQEESVRLHQ INIYLSDRIS LHRRLPERWN 130 140 150 160 170 180 PLCKEKKYNY DELPTTSVVI AFYNEAWSTL LRTVYSVLET SPDTLLEEVI LVDDYSDREH 190 200 210 220 230 240 LKERLATELA GLPKVRLIRA NKREGLVRAR LLGASVAKGD VLTFLDCHCE CHEGWLEPLL 250 260 270 280 290 300 QRIHEKESAV VCPVIDVIDW NTFEYLGNAG EPQIGGFDWR LVFTWHTVPE KERIRMRSPI 310 320 330 340 350 360 DVIRSPTMAG GLFAVSKKYF EYLGSYDIGM EVWGGENLEF SFRIWQCGGT LEIHPCSHVG 370 380 390 400 410 420 HVFPRQAPYS RNKALANSVR AAEVWMDEFK ELYYHRNPQA RLEPFGDVTE RRQLRARLGC 430 440 450 460 470 480 KDFKWFLNTV YPELHVPEDR PGFFGMLQNK GLRDYCFDYN PPNEHEITGH QVILYRCHGM 490 500 510 520 530 540 GQNQFFEYTS QNEIRYNTHQ PEGCVAVVEG TDVLIMHLCE NTTPEDQKFI LQEDGSLFHV 550 560 570 PSKKCVQAER KDLSDSFVPL LRDCTNLDHQ KWFFREHIV

References

[1]

Moore S., Alexander L., Brownstein M., Guan L., Lobo S., Meng Y., Tanaguchi M., Wang Z., Yu J., Prange C., Schreiber K., Shenmen C., Wagner L., Bala M., Barbazuk S., Barber S., Babakaiff R., Beland J. , Chun E., Del Rio L., Gibson S., Hanson R., Kirkpatrick R., Liu J., Matsuo C., Mayo M., Santos R.R., Stott J., Tsai M., Wong D., Siddiqui A., Holt R., Jones S.J., Marra M.A. Submitted (JUN-2007) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE. Strain: Hereford EMBL AAI48122.1. Tissue: Fetal spinal column EMBL AAI48122.1.

Cross-references

Sequence databases
EMBLGenBankDDBJ	BC148121 mRNA. Translation: AAI48122.1.
IPI	IPI00707527.
RefSeq	NP_001093795.1.
UniGene	Bt.8395
3D structure databases
ModBase	Search...
Genome annotation databases
Ensembl	ENSBTAT00000011895; ENSBTAP00000011895; ENSBTAG00000009037; Bos taurus. [Genome view]
GeneID	508488.
KEGG	bta:508488.
Organism-specific databases
CTD	508488.
Phylogenomic databases
OMA	ERWNPLC.
Family and domain databases
InterPro	IPR001173. Glyco_trans_2. IPR008997. Ricin_B-rel_lectin. IPR000772. Ricin_B_lectin. [Graphical view]
Pfam	PF00535. Glycos_transf_2. 1 hit. PF00652. Ricin_B_lectin. 1 hit. [Graphical view]
SMART	SM00458. RICIN. 1 hit. [Graphical view]
PROSITE	PS50231. RICIN_B_LECTIN. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

A6QLX6_BOVIN

Accession

Primary (citable) accession number: A6QLX6

Entry history

Integrated into UniProtKB/TrEMBL:	August 21, 2007
Last sequence update:	August 21, 2007
Last modified:	November 3, 2009
This is version 23 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)