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Protein

Paraneoplastic antigen Ma1 homolog

Gene

PNMA1

Organism
Bos taurus (Bovine)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Experimental evidence at transcript leveli

Functioni

GO - Biological processi

Complete GO annotation...

Names & Taxonomyi

Protein namesi
Recommended name:
Paraneoplastic antigen Ma1 homolog
Gene namesi
Name:PNMA1
OrganismiBos taurus (Bovine)
Taxonomic identifieri9913 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaLaurasiatheriaCetartiodactylaRuminantiaPecoraBovidaeBovinaeBos
Proteomesi
  • UP000009136 Componenti: Chromosome 10

Subcellular locationi

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

Nucleus

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 353353Paraneoplastic antigen Ma1 homologPRO_0000311221Add
BLAST

Proteomic databases

PaxDbiA6QLK5.

Interactioni

Protein-protein interaction databases

STRINGi9913.ENSBTAP00000012212.

Family & Domainsi

Sequence similaritiesi

Belongs to the PNMA family.Curated

Phylogenomic databases

eggNOGiENOG410IIH9. Eukaryota.
ENOG410YK5I. LUCA.
GeneTreeiENSGT00530000062986.
HOGENOMiHOG000013079.
HOVERGENiHBG052488.
InParanoidiA6QLK5.
OMAiEHTNEVM.
OrthoDBiEOG708VZW.
TreeFamiTF335054.

Family and domain databases

InterProiIPR026523. PNMA.
IPR026528. PNMA1.
[Graphical view]
PANTHERiPTHR23095. PTHR23095. 1 hit.
PTHR23095:SF17. PTHR23095:SF17. 1 hit.
PfamiPF14893. PNMA. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

A6QLK5-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MAMTLLEDWC RGMDVNSQRA LLVWGIPVNC DEAEIEETLQ AAMPQVHYRV
60 70 80 90 100
LGRMFWREEN AKAALLELTG TVDYAAIPRE MPGKGGVWKV VFKPPTSDAE
110 120 130 140 150
FLERLHLFLA REGWTVQDVA RVLGFENSSP APGPDMPAEM LNYILDNVIK
160 170 180 190 200
PLIESIWYKK LTLFSGRDIP GPGEETFEPW LEHANEVIEE WQVSDIEKRR
210 220 230 240 250
RLMESLRGPA ADVIRILKTN NPDITTAECL KALEQVFGSV ESSRDVQVRF
260 270 280 290 300
LNTYQNPGEK LSAYVIRLEP LLQKVVEKGA IDKENVNQAR LEQVIAGANH
310 320 330 340 350
SGAIRRQLWL TGAAEGPAPN LFQLLVQIRE EEAKEEEAAA EAALLQLGLE

GHF
Length:353
Mass (Da):39,694
Last modified:August 21, 2007 - v1
Checksum:i5D3A8C4A6DC1FD53
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BC147997 mRNA. Translation: AAI47998.1.
RefSeqiNP_001098461.1. NM_001104991.2.
UniGeneiBt.7584.

Genome annotation databases

EnsembliENSBTAT00000012212; ENSBTAP00000012212; ENSBTAG00000009271.
GeneIDi538718.
KEGGibta:538718.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BC147997 mRNA. Translation: AAI47998.1.
RefSeqiNP_001098461.1. NM_001104991.2.
UniGeneiBt.7584.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi9913.ENSBTAP00000012212.

Proteomic databases

PaxDbiA6QLK5.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENSBTAT00000012212; ENSBTAP00000012212; ENSBTAG00000009271.
GeneIDi538718.
KEGGibta:538718.

Organism-specific databases

CTDi9240.

Phylogenomic databases

eggNOGiENOG410IIH9. Eukaryota.
ENOG410YK5I. LUCA.
GeneTreeiENSGT00530000062986.
HOGENOMiHOG000013079.
HOVERGENiHBG052488.
InParanoidiA6QLK5.
OMAiEHTNEVM.
OrthoDBiEOG708VZW.
TreeFamiTF335054.

Miscellaneous databases

NextBioi20877538.

Family and domain databases

InterProiIPR026523. PNMA.
IPR026528. PNMA1.
[Graphical view]
PANTHERiPTHR23095. PTHR23095. 1 hit.
PTHR23095:SF17. PTHR23095:SF17. 1 hit.
PfamiPF14893. PNMA. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. NIH - Mammalian Gene Collection (MGC) project
    Submitted (JUN-2007) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
    Strain: Hereford.
    Tissue: Basal ganglia.

Entry informationi

Entry nameiPNMA1_BOVIN
AccessioniPrimary (citable) accession number: A6QLK5
Entry historyi
Integrated into UniProtKB/Swiss-Prot: November 13, 2007
Last sequence update: August 21, 2007
Last modified: November 11, 2015
This is version 39 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.