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Protein

ATP synthase subunit beta

Gene

atpD

Organism
Staphylococcus aureus (strain Newman)
Status
Reviewed-Annotation score: -Protein inferred from homologyi

Functioni

Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits.UniRule annotation

Catalytic activityi

ATP + H2O + H+(In) = ADP + phosphate + H+(Out).UniRule annotation

Regions

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Nucleotide bindingi155 – 162ATPUniRule annotation8

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionHydrolase
Biological processATP synthesis, Hydrogen ion transport, Ion transport, Transport
LigandATP-binding, Nucleotide-binding

Names & Taxonomyi

Protein namesi
Recommended name:
ATP synthase subunit betaUniRule annotation (EC:3.6.3.14UniRule annotation)
Alternative name(s):
ATP synthase F1 sector subunit betaUniRule annotation
F-ATPase subunit betaUniRule annotation
Gene namesi
Name:atpDUniRule annotation
Ordered Locus Names:NWMN_2007
OrganismiStaphylococcus aureus (strain Newman)
Taxonomic identifieri426430 [NCBI]
Taxonomic lineageiBacteriaFirmicutesBacilliBacillalesStaphylococcaceaeStaphylococcus
Proteomesi

Subcellular locationi

  • Cell membrane UniRule annotation; Peripheral membrane protein UniRule annotation

GO - Cellular componenti

Keywords - Cellular componenti

Cell membrane, CF(1), Membrane

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_10000733691 – 470ATP synthase subunit betaAdd BLAST470

Proteomic databases

PRIDEiA6QIU7

Interactioni

Subunit structurei

F-type ATPases have 2 components, CF1 - the catalytic core - and CF0 - the membrane proton channel. CF1 has five subunits: alpha3, beta3, gamma1, delta1, epsilon1. CF0 has three main subunits: a1, b2 and c(9-12). The alpha and beta chains form an alternating ring which encloses part of the gamma chain. CF1 is attached to CF0 by a central stalk formed by the gamma and epsilon chains, while a peripheral stalk is formed by the delta and b chains.UniRule annotation

Structurei

3D structure databases

ProteinModelPortaliA6QIU7
SMRiA6QIU7
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the ATPase alpha/beta chains family.UniRule annotation

Phylogenomic databases

HOGENOMiHOG000009605
KOiK02112
OMAiFNMIMDG

Family and domain databases

Gene3Di1.10.1140.10, 1 hit
HAMAPiMF_01347 ATP_synth_beta_bact, 1 hit
InterProiView protein in InterPro
IPR003593 AAA+_ATPase
IPR005722 ATP_synth_F1_bsu
IPR020003 ATPase_a/bsu_AS
IPR004100 ATPase_F1/V1/A1_a/bsu_N
IPR036121 ATPase_F1/V1/A1_a/bsu_N_sf
IPR000194 ATPase_F1/V1/A1_a/bsu_nucl-bd
IPR024034 ATPase_F1/V1_b/a_C
IPR027417 P-loop_NTPase
PfamiView protein in Pfam
PF00006 ATP-synt_ab, 1 hit
PF02874 ATP-synt_ab_N, 1 hit
SMARTiView protein in SMART
SM00382 AAA, 1 hit
SUPFAMiSSF50615 SSF50615, 1 hit
SSF52540 SSF52540, 1 hit
TIGRFAMsiTIGR01039 atpD, 1 hit
PROSITEiView protein in PROSITE
PS00152 ATPASE_ALPHA_BETA, 1 hit

Sequencei

Sequence statusi: Complete.

A6QIU7-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MGIGRVTQVM GPVIDVRFEH NEVPKINNAL VIDVPKEEGT IQLTLEVALQ
60 70 80 90 100
LGDDVVRTIA MDSTDGVQRG MDVKDTGKEI SVPVGDETLG RVFNVLGETI
110 120 130 140 150
DLKEEISDSV RRDPIHRQAP AFDELSTEVQ ILETGIKVVD LLAPYIKGGK
160 170 180 190 200
IGLFGGAGVG KTVLIQELIN NIAQEHGGIS VFAGVGERTR EGNDLYFEMS
210 220 230 240 250
DSGVIKKTAM VFGQMNEPPG ARMRVALSGL TMAEYFRDEQ GQDVLLFIDN
260 270 280 290 300
IFRFTQAGSE VSALLGRMPS AVGYQPTLAT EMGQLQERIT STTKGSVTSI
310 320 330 340 350
QAVFVPADDY TDPAPATAFA HLDATTNLER KLTEMGIYPA VDPLASTSRA
360 370 380 390 400
LEPSIVGQEH YEVARDVQST LQKYRELQDI IAILGMDELS DEDKQTVERA
410 420 430 440 450
RRIQFFLSQN FHVAEQFTGQ KGSYVPVKTT VANFKDILDG KYDHIPEDAF
460 470
RLVGSMDDVI AKAKDMGVEV
Length:470
Mass (Da):51,400
Last modified:August 21, 2007 - v1
Checksum:iC388E63D87E7F488
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AP009351 Genomic DNA Translation: BAF68279.1
RefSeqiWP_000511135.1, NZ_CP023390.1

Genome annotation databases

EnsemblBacteriaiBAF68279; BAF68279; NWMN_2007
KEGGisae:NWMN_2007

Entry informationi

Entry nameiATPB_STAAE
AccessioniPrimary (citable) accession number: A6QIU7
Entry historyiIntegrated into UniProtKB/Swiss-Prot: February 26, 2008
Last sequence update: August 21, 2007
Last modified: March 28, 2018
This is version 83 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome

Documents

  1. SIMILARITY comments
    Index of protein domains and families

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