A6PYF3 (A6PYF3_GADMO) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Goose-type lysozyme 2 EMBL CAL18268.1

Gene names

Name:

lysozyme2 EMBL CAL18268.1

Organism

Gadus morhua (Atlantic cod) EMBL CAL18268.1

Taxonomic identifier

8049 [NCBI]

Taxonomic lineage

Eukaryota › Metazoa › Chordata › Craniata › Vertebrata › Euteleostomi › Actinopterygii › Neopterygii › Teleostei › Euteleostei › Neoteleostei › Acanthomorpha › Paracanthopterygii › Gadiformes › Gadidae › Gadus

Protein attributes

Sequence length	119 AA.
Sequence status	Fragment.
Protein existence	Evidence at transcript level

Ontologies

Gene Ontology (GO)
Biological process	cell wall macromolecule catabolic process Inferred from electronic annotation. Source: InterPro peptidoglycan catabolic process Inferred from electronic annotation. Source: InterPro
Molecular function	lysozyme activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Experimental info
	Non-terminal residue	119	1	EMBL CAL18268.1

Sequences

	Sequence		Length	Mass (Da)
	A6PYF3 [UniParc]. Last modified August 21, 2007. Version 1. Checksum: 3EC5C932CD4626C6	FASTA	119	12,488
	10 20 30 40 50 60 MGYGDIMRVE TSGASNLTAG ADRLTGGVQA SEKMANHDLA CMRTYKTTIG KVASKRDVDP 70 80 90 100 110 ALIAAIASRE SRGGAAISGN NGWCPRRIGF GLMQVDKDAH TPIGAWNSVE HVDQATGIL

References

[1]	"Cloning and expression analysis of lysozyme genes in Atlantic cod." Urquhart K.L., Zou J., Bowden T.J., Ellis A.E., Secombes C.J. Submitted (JUL-2006) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE. Tissue: Gut EMBL CAL18268.1.

Cross-references

Sequence databases
EMBL GenBank DDBJ	AM286748 mRNA. Translation: CAL18268.1.
3D structure databases
ModBase	Search...
Protein family/group databases
CAZy	GH23. Glycoside Hydrolase Family 23.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Phylogenomic databases
HOVERGEN	HBG006299.
Family and domain databases
InterPro	IPR002152. Glyco_hydro_23. IPR023346. Lysozyme-like_dom. IPR008258. Lytic_TGlycosylase-like_cat. [Graphical view]
Pfam	PF01464. SLT. 1 hit. [Graphical view]
PRINTS	PR00749. LYSOZYMEG.
SUPFAM	SSF53955. SSF53955. 1 hit.
ProtoNet	Search...

Entry information

Entry name

A6PYF3_GADMO

Accession

Primary (citable) accession number: A6PYF3

Entry history

Integrated into UniProtKB/TrEMBL:	August 21, 2007
Last sequence update:	August 21, 2007
Last modified:	April 5, 2011
This is version 12 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)