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A6NNT2 (CP096_HUMAN) Reviewed, UniProtKB/Swiss-Prot

Last modified March 6, 2013. Version 35. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (1) | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesRecommended name:
Putative uncharacterized protein C16orf96
Gene names
Name:C16orf96
OrganismHomo sapiens (Human) [Reference proteome]
Taxonomic identifier9606 [NCBI]
Taxonomic lineageEukaryota › Metazoa › Chordata › Craniata › Vertebrata › Euteleostomi › Mammalia › Eutheria › Euarchontoglires › Primates › Haplorrhini › Catarrhini › Hominidae › Homo

Protein attributes

Sequence length1141 AA.
Sequence statusComplete.
Protein existenceUncertain

General annotation (Comments)

Caution

Product of a dubious gene prediction.

Ontologies

Keywords
   DomainCoiled coil
   Technical termComplete proteome
Reference proteome
Gene Ontology (GO)
None. [Check GOA]

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 11411141Putative uncharacterized protein C16orf96
PRO_0000345628

Regions

Coiled coil74 – 10128 Potential
Coiled coil145 – 17632 Potential
Coiled coil757 – 81054 Potential
Compositional bias306 – 440135Pro-rich
Compositional bias568 – 61447Ala-rich

Sequences

Sequence LengthMass (Da)Tools
A6NNT2 [UniParc].

Last modified October 19, 2011. Version 3.
Checksum: 2EC01FC5481CC306

FASTA1,141125,041
        10         20         30         40         50         60 
MSFSLTFTEL ANIAIPQCGV LNFKALHLLL HGILEHIHMA ELKKVLSGDE DFLQTSQVVI 

        70         80         90        100        110        120 
MPREGDAQPI LNPMKRLSNV FDHVVSRLDK LENQLALLQD LPSTAQLLEA SQGTARPVQD 

       130        140        150        160        170        180 
LWHLIKLRKM VEGHDEVMAK SMQTLQDLLT DLHALQVTIT ALRKEVDMLK NMLDKVHPER 

       190        200        210        220        230        240 
MDIFAEDFKI QNWKMVALQR EVASLQNKFK TIPKTEDMVL WSGLHDAMFT SEIGSSPLDL 

       250        260        270        280        290        300 
WQSVEQLPEA ALAQTTKYLE ATRAIQVSEP VQNPQLLQTV WHYEVPELLP EGSSAQAVSL 

       310        320        330        340        350        360 
SRAQEPAQPP ALTPESAPGC TTEFAPGPAP GTEPVPGLEL GLELEPVPAL GPVPGPSVTP 

       370        380        390        400        410        420 
GSLPAPWPVL GPVPAPGAQP PPLGDWPALP RRWPLPQGWP RVGSWPLWDL GVLRPTQPQP 

       430        440        450        460        470        480 
SRAPPPATEF GSLWPRPLQP YQSRQGEALQ LAAVQVKGEE NDVPSLRGLR ERARKDGAPK 

       490        500        510        520        530        540 
DRTRKDGVPK DRGGKDVDPK DRAHKDDVPK DRGGKDVDPK DRAHKDDVPK DRGGKDGDPK 

       550        560        570        580        590        600 
DRVGKDGAPK EAQPKAPQSA LHRLKTTAAI AAAAAAAYAA ATSSAAQAAK VAAKFVKDAP 

       610        620        630        640        650        660 
ATKMAAIATD TAAAGPLGVF ADVLGAGPSR GATESQILGD DSEIYEILSP SYSAASIGPD 

       670        680        690        700        710        720 
PALSQAMVAT KQAMSPEDKK RAVKYSMSHI AQIPVKHDSL KEEFAQLSCN LNQRLSYLAN 

       730        740        750        760        770        780 
MGGPSSLGTT VDILQKKIGS LQKSRLKEEE LERIWGNQIE MMKDRYITLD KAVENLQIRM 

       790        800        810        820        830        840 
DEFKTLQAQI KRLEMNKVNK STMEEELREK ADRSALAGKA SRVDLETVAL ELNEMIQGIL 

       850        860        870        880        890        900 
FKVTIHEDSW KKAMEELSKD VNTKLVHSDL DPLKKEMEEV WKIVRKLLIE GLRLDPDSAA 

       910        920        930        940        950        960 
GFRRKLFKRV KCISCDRPVE MMTGPQLITI RKAHLLSRLR PASANSCEYL QRQQMREQQW 

       970        980        990       1000       1010       1020 
LQLQDLGIQE DCQQDWGDGP QNATSLKCKS CNLLTLYPYG DPHVIDYDSA EVDILGVDGI 

      1030       1040       1050       1060       1070       1080 
LYKGRVNSQR GAQPLAVAKE LAAVKAPSPP SQSLYDRVHS SALFGAICPP LCPRSSACSA 

      1090       1100       1110       1120       1130       1140 
ASGPHLTMPA RPPSLPPLLL LPPLIPSLRD PQQAPGSTRL SRAPHIESRV GRKPPEEPAN 


P

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References

[1]"The sequence and analysis of duplication-rich human chromosome 16."
Martin J., Han C., Gordon L.A., Terry A., Prabhakar S., She X., Xie G., Hellsten U., Chan Y.M., Altherr M., Couronne O., Aerts A., Bajorek E., Black S., Blumer H., Branscomb E., Brown N.C., Bruno W.J. expand/collapse author list , Buckingham J.M., Callen D.F., Campbell C.S., Campbell M.L., Campbell E.W., Caoile C., Challacombe J.F., Chasteen L.A., Chertkov O., Chi H.C., Christensen M., Clark L.M., Cohn J.D., Denys M., Detter J.C., Dickson M., Dimitrijevic-Bussod M., Escobar J., Fawcett J.J., Flowers D., Fotopulos D., Glavina T., Gomez M., Gonzales E., Goodstein D., Goodwin L.A., Grady D.L., Grigoriev I., Groza M., Hammon N., Hawkins T., Haydu L., Hildebrand C.E., Huang W., Israni S., Jett J., Jewett P.B., Kadner K., Kimball H., Kobayashi A., Krawczyk M.-C., Leyba T., Longmire J.L., Lopez F., Lou Y., Lowry S., Ludeman T., Manohar C.F., Mark G.A., McMurray K.L., Meincke L.J., Morgan J., Moyzis R.K., Mundt M.O., Munk A.C., Nandkeshwar R.D., Pitluck S., Pollard M., Predki P., Parson-Quintana B., Ramirez L., Rash S., Retterer J., Ricke D.O., Robinson D.L., Rodriguez A., Salamov A., Saunders E.H., Scott D., Shough T., Stallings R.L., Stalvey M., Sutherland R.D., Tapia R., Tesmer J.G., Thayer N., Thompson L.S., Tice H., Torney D.C., Tran-Gyamfi M., Tsai M., Ulanovsky L.E., Ustaszewska A., Vo N., White P.S., Williams A.L., Wills P.L., Wu J.-R., Wu K., Yang J., DeJong P., Bruce D., Doggett N.A., Deaven L., Schmutz J., Grimwood J., Richardson P., Rokhsar D.S., Eichler E.E., Gilna P., Lucas S.M., Myers R.M., Rubin E.M., Pennacchio L.A.
Nature 432:988-994(2004) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		AC023830 Genomic DNA. No translation available.
IPIIPI00940746.
RefSeqNP_001138483.1. NM_001145011.1.
UniGeneHs.684212.

3D structure databases

ModBaseSearch...

PTM databases

PhosphoSiteA6NNT2.

Proteomic databases

PaxDbA6NNT2.
PRIDEA6NNT2.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblENST00000444310; ENSP00000415027; ENSG00000205832.
GeneID342346.
KEGGhsa:342346.

Organism-specific databases

CTD342346.
GeneCardsGC16P004607.
HGNCHGNC:40031. C16orf96.
HPAHPA042009.
HPA042058.
neXtProtNX_A6NNT2.
GenAtlasSearch...

Phylogenomic databases

eggNOGNOG127335.
HOGENOMHOG000202728.
HOVERGENHBG108740.
InParanoidA6NNT2.
OMALELNEMI.
OrthoDBEOG4FN4JR.

Gene expression databases

BgeeA6NNT2.
GenevestigatorA6NNT2.

Family and domain databases

ProtoNetSearch...

Other

GenomeRNAi342346.
NextBio98260.

Entry information

Entry nameCP096_HUMAN
AccessionPrimary (citable) accession number: A6NNT2
Secondary accession number(s): C9JH24
Entry history
Integrated into UniProtKB/Swiss-Prot: July 22, 2008
Last sequence update: October 19, 2011
Last modified: March 6, 2013
This is version 35 of the entry and version 3 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program
DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.

Relevant documents

Human chromosome 16

Human chromosome 16: entries, gene names and cross-references to MIM

to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·Documents