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A6NNT2

- CP096_HUMAN

UniProt

A6NNT2 - CP096_HUMAN

Protein

Putative uncharacterized protein C16orf96

Gene

C16orf96

Organism
Homo sapiens (Human)
Status
Reviewed - Annotation score: 2 out of 5- Protein uncertaini
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    • History
      Entry version 43 (01 Oct 2014)
      Sequence version 3 (19 Oct 2011)
      Previous versions | rss
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    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Putative uncharacterized protein C16orf96
    Gene namesi
    OrganismiHomo sapiens (Human)
    Taxonomic identifieri9606 [NCBI]
    Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaeHomo
    ProteomesiUP000005640: Chromosome 16

    Organism-specific databases

    HGNCiHGNC:40031. C16orf96.

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Chaini1 – 11411141Putative uncharacterized protein C16orf96PRO_0000345628Add
    BLAST

    Proteomic databases

    PaxDbiA6NNT2.
    PRIDEiA6NNT2.

    PTM databases

    PhosphoSiteiA6NNT2.

    Expressioni

    Gene expression databases

    BgeeiA6NNT2.
    GenevestigatoriA6NNT2.

    Organism-specific databases

    HPAiHPA042009.
    HPA042058.

    Structurei

    3D structure databases

    ProteinModelPortaliA6NNT2.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Coiled coil

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Coiled coili74 – 10128Sequence AnalysisAdd
    BLAST
    Coiled coili145 – 17632Sequence AnalysisAdd
    BLAST
    Coiled coili757 – 81054Sequence AnalysisAdd
    BLAST

    Compositional bias

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Compositional biasi306 – 440135Pro-richAdd
    BLAST
    Compositional biasi568 – 61447Ala-richAdd
    BLAST

    Keywords - Domaini

    Coiled coil

    Phylogenomic databases

    eggNOGiNOG127335.
    HOGENOMiHOG000202728.
    HOVERGENiHBG108740.
    InParanoidiA6NNT2.
    OMAiTKLVHSD.
    OrthoDBiEOG7K9K26.
    PhylomeDBiA6NNT2.
    TreeFamiTF339506.

    Sequencei

    Sequence statusi: Complete.

    A6NNT2-1 [UniParc]FASTAAdd to Basket

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    MSFSLTFTEL ANIAIPQCGV LNFKALHLLL HGILEHIHMA ELKKVLSGDE     50
    DFLQTSQVVI MPREGDAQPI LNPMKRLSNV FDHVVSRLDK LENQLALLQD 100
    LPSTAQLLEA SQGTARPVQD LWHLIKLRKM VEGHDEVMAK SMQTLQDLLT 150
    DLHALQVTIT ALRKEVDMLK NMLDKVHPER MDIFAEDFKI QNWKMVALQR 200
    EVASLQNKFK TIPKTEDMVL WSGLHDAMFT SEIGSSPLDL WQSVEQLPEA 250
    ALAQTTKYLE ATRAIQVSEP VQNPQLLQTV WHYEVPELLP EGSSAQAVSL 300
    SRAQEPAQPP ALTPESAPGC TTEFAPGPAP GTEPVPGLEL GLELEPVPAL 350
    GPVPGPSVTP GSLPAPWPVL GPVPAPGAQP PPLGDWPALP RRWPLPQGWP 400
    RVGSWPLWDL GVLRPTQPQP SRAPPPATEF GSLWPRPLQP YQSRQGEALQ 450
    LAAVQVKGEE NDVPSLRGLR ERARKDGAPK DRTRKDGVPK DRGGKDVDPK 500
    DRAHKDDVPK DRGGKDVDPK DRAHKDDVPK DRGGKDGDPK DRVGKDGAPK 550
    EAQPKAPQSA LHRLKTTAAI AAAAAAAYAA ATSSAAQAAK VAAKFVKDAP 600
    ATKMAAIATD TAAAGPLGVF ADVLGAGPSR GATESQILGD DSEIYEILSP 650
    SYSAASIGPD PALSQAMVAT KQAMSPEDKK RAVKYSMSHI AQIPVKHDSL 700
    KEEFAQLSCN LNQRLSYLAN MGGPSSLGTT VDILQKKIGS LQKSRLKEEE 750
    LERIWGNQIE MMKDRYITLD KAVENLQIRM DEFKTLQAQI KRLEMNKVNK 800
    STMEEELREK ADRSALAGKA SRVDLETVAL ELNEMIQGIL FKVTIHEDSW 850
    KKAMEELSKD VNTKLVHSDL DPLKKEMEEV WKIVRKLLIE GLRLDPDSAA 900
    GFRRKLFKRV KCISCDRPVE MMTGPQLITI RKAHLLSRLR PASANSCEYL 950
    QRQQMREQQW LQLQDLGIQE DCQQDWGDGP QNATSLKCKS CNLLTLYPYG 1000
    DPHVIDYDSA EVDILGVDGI LYKGRVNSQR GAQPLAVAKE LAAVKAPSPP 1050
    SQSLYDRVHS SALFGAICPP LCPRSSACSA ASGPHLTMPA RPPSLPPLLL 1100
    LPPLIPSLRD PQQAPGSTRL SRAPHIESRV GRKPPEEPAN P 1141
    Length:1,141
    Mass (Da):125,041
    Last modified:October 19, 2011 - v3
    Checksum:i2EC01FC5481CC306
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AC023830 Genomic DNA. No translation available.
    CCDSiCCDS53986.1.
    RefSeqiNP_001138483.1. NM_001145011.1.
    UniGeneiHs.684212.

    Genome annotation databases

    EnsembliENST00000444310; ENSP00000415027; ENSG00000205832.
    GeneIDi342346.
    KEGGihsa:342346.
    UCSCiuc010uxn.2. human.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AC023830 Genomic DNA. No translation available.
    CCDSi CCDS53986.1.
    RefSeqi NP_001138483.1. NM_001145011.1.
    UniGenei Hs.684212.

    3D structure databases

    ProteinModelPortali A6NNT2.
    ModBasei Search...
    MobiDBi Search...

    PTM databases

    PhosphoSitei A6NNT2.

    Proteomic databases

    PaxDbi A6NNT2.
    PRIDEi A6NNT2.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    Ensembli ENST00000444310 ; ENSP00000415027 ; ENSG00000205832 .
    GeneIDi 342346.
    KEGGi hsa:342346.
    UCSCi uc010uxn.2. human.

    Organism-specific databases

    CTDi 342346.
    GeneCardsi GC16P004607.
    HGNCi HGNC:40031. C16orf96.
    HPAi HPA042009.
    HPA042058.
    neXtProti NX_A6NNT2.
    GenAtlasi Search...

    Phylogenomic databases

    eggNOGi NOG127335.
    HOGENOMi HOG000202728.
    HOVERGENi HBG108740.
    InParanoidi A6NNT2.
    OMAi TKLVHSD.
    OrthoDBi EOG7K9K26.
    PhylomeDBi A6NNT2.
    TreeFami TF339506.

    Miscellaneous databases

    GenomeRNAii 342346.
    NextBioi 98260.

    Gene expression databases

    Bgeei A6NNT2.
    Genevestigatori A6NNT2.

    Family and domain databases

    ProtoNeti Search...

    Publicationsi

    1. "The sequence and analysis of duplication-rich human chromosome 16."
      Martin J., Han C., Gordon L.A., Terry A., Prabhakar S., She X., Xie G., Hellsten U., Chan Y.M., Altherr M., Couronne O., Aerts A., Bajorek E., Black S., Blumer H., Branscomb E., Brown N.C., Bruno W.J.
      , Buckingham J.M., Callen D.F., Campbell C.S., Campbell M.L., Campbell E.W., Caoile C., Challacombe J.F., Chasteen L.A., Chertkov O., Chi H.C., Christensen M., Clark L.M., Cohn J.D., Denys M., Detter J.C., Dickson M., Dimitrijevic-Bussod M., Escobar J., Fawcett J.J., Flowers D., Fotopulos D., Glavina T., Gomez M., Gonzales E., Goodstein D., Goodwin L.A., Grady D.L., Grigoriev I., Groza M., Hammon N., Hawkins T., Haydu L., Hildebrand C.E., Huang W., Israni S., Jett J., Jewett P.B., Kadner K., Kimball H., Kobayashi A., Krawczyk M.-C., Leyba T., Longmire J.L., Lopez F., Lou Y., Lowry S., Ludeman T., Manohar C.F., Mark G.A., McMurray K.L., Meincke L.J., Morgan J., Moyzis R.K., Mundt M.O., Munk A.C., Nandkeshwar R.D., Pitluck S., Pollard M., Predki P., Parson-Quintana B., Ramirez L., Rash S., Retterer J., Ricke D.O., Robinson D.L., Rodriguez A., Salamov A., Saunders E.H., Scott D., Shough T., Stallings R.L., Stalvey M., Sutherland R.D., Tapia R., Tesmer J.G., Thayer N., Thompson L.S., Tice H., Torney D.C., Tran-Gyamfi M., Tsai M., Ulanovsky L.E., Ustaszewska A., Vo N., White P.S., Williams A.L., Wills P.L., Wu J.-R., Wu K., Yang J., DeJong P., Bruce D., Doggett N.A., Deaven L., Schmutz J., Grimwood J., Richardson P., Rokhsar D.S., Eichler E.E., Gilna P., Lucas S.M., Myers R.M., Rubin E.M., Pennacchio L.A.
      Nature 432:988-994(2004) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

    Entry informationi

    Entry nameiCP096_HUMAN
    AccessioniPrimary (citable) accession number: A6NNT2
    Secondary accession number(s): C9JH24
    Entry historyi
    Integrated into UniProtKB/Swiss-Prot: July 22, 2008
    Last sequence update: October 19, 2011
    Last modified: October 1, 2014
    This is version 43 of the entry and version 3 of the sequence. [Complete history]
    Entry statusiReviewed (UniProtKB/Swiss-Prot)
    Annotation programChordata Protein Annotation Program
    DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.

    Miscellaneousi

    Caution

    Product of a dubious gene prediction.Curated

    Keywords - Technical termi

    Complete proteome, Reference proteome

    Documents

    1. Human chromosome 16
      Human chromosome 16: entries, gene names and cross-references to MIM

    External Data

    Dasty 3