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Protein

Protein FAM90A27P

Gene

FAM90A27P

Organism
Homo sapiens (Human)
Status
Reviewed-Annotation score: Annotation score: 1 out of 5-Protein inferred from homologyi

Functioni

GO - Molecular functioni

  1. nucleic acid binding Source: InterPro
  2. zinc ion binding Source: InterPro
Complete GO annotation...

Names & Taxonomyi

Protein namesi
Recommended name:
Protein FAM90A27P
Gene namesi
OrganismiHomo sapiens (Human)
Taxonomic identifieri9606 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaeHomo
ProteomesiUP000005640: Unplaced

Organism-specific databases

HGNCiHGNC:43617. FAM90A27P.

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 459459Protein FAM90A27PPRO_0000299600Add
BLAST

Proteomic databases

PaxDbiA6NNH2.
PRIDEiA6NNH2.

PTM databases

PhosphoSiteiA6NNH2.

Expressioni

Gene expression databases

BgeeiA6NNH2.
GenevestigatoriA6NNH2.

Structurei

3D structure databases

ProteinModelPortaliA6NNH2.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the FAM90 family.Curated

Phylogenomic databases

eggNOGiNOG286396.
HOGENOMiHOG000015373.
HOVERGENiHBG107893.
InParanoidiA6NNH2.
PhylomeDBiA6NNH2.

Family and domain databases

InterProiIPR001878. Znf_CCHC.
[Graphical view]
SMARTiSM00343. ZnF_C2HC. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

A6NNH2-1 [UniParc]FASTAAdd to Basket

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        10         20         30         40         50
MARHSVHHQA QRPPRAKNPQ EQQRRPMGQT TLPAEQEESR VKCKNCGAFG
60 70 80 90 100
HSARSKTCPI KRWSGALPLQ ALGSHKEKEN LKPAKAQLPF TTPGPFTTND
110 120 130 140 150
REKERSPSPQ QQQSEAPTQT FPRTPQEKMQ EAWKEPAEDC LFLRHPTMPL
160 170 180 190 200
PVHTTKKRSV LGPVSTGPPP VNKPEMRLLC PSGHNDSPQL STCGPTKGHG
210 220 230 240 250
RDVTASLLPV LKSSHQTPTL SARLPANRPD MSSHGALQPA MQALALGPGL
260 270 280 290 300
KSQAEIKHPD ADAKPRPQQV RKQCGQDSRT QAPDKEPAPV PTQTFQNPAK
310 320 330 340 350
KARFSSFQTP ALRTQLPDVG AVQTLQPPRT ATGLGSKEAP KATAETAATK
360 370 380 390 400
TATLQPRVNL QPAPSSPFLG PAQGCPVLQP GPPIHVPGRP GSVTFMRGDK
410 420 430 440 450
GQKSPRFRMP PTSRPPENSA SAQSPRFSRQ PEGQGPQVST SVLYEDLLVT

SSSEDSDSD
Length:459
Mass (Da):49,646
Last modified:July 22, 2008 - v2
Checksum:iD2431992AB69D1F5
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC092070 Genomic DNA. No translation available.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC092070 Genomic DNA. No translation available.

3D structure databases

ProteinModelPortaliA6NNH2.
ModBaseiSearch...
MobiDBiSearch...

PTM databases

PhosphoSiteiA6NNH2.

Proteomic databases

PaxDbiA6NNH2.
PRIDEiA6NNH2.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Organism-specific databases

GeneCardsiGC19P053784.
HGNCiHGNC:43617. FAM90A27P.
neXtProtiNX_A6NNH2.
GenAtlasiSearch...

Phylogenomic databases

eggNOGiNOG286396.
HOGENOMiHOG000015373.
HOVERGENiHBG107893.
InParanoidiA6NNH2.
PhylomeDBiA6NNH2.

Miscellaneous databases

PROiA6NNH2.

Gene expression databases

BgeeiA6NNH2.
GenevestigatoriA6NNH2.

Family and domain databases

InterProiIPR001878. Znf_CCHC.
[Graphical view]
SMARTiSM00343. ZnF_C2HC. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "The DNA sequence and biology of human chromosome 19."
    Grimwood J., Gordon L.A., Olsen A.S., Terry A., Schmutz J., Lamerdin J.E., Hellsten U., Goodstein D., Couronne O., Tran-Gyamfi M., Aerts A., Altherr M., Ashworth L., Bajorek E., Black S., Branscomb E., Caenepeel S., Carrano A.V.
    , Caoile C., Chan Y.M., Christensen M., Cleland C.A., Copeland A., Dalin E., Dehal P., Denys M., Detter J.C., Escobar J., Flowers D., Fotopulos D., Garcia C., Georgescu A.M., Glavina T., Gomez M., Gonzales E., Groza M., Hammon N., Hawkins T., Haydu L., Ho I., Huang W., Israni S., Jett J., Kadner K., Kimball H., Kobayashi A., Larionov V., Leem S.-H., Lopez F., Lou Y., Lowry S., Malfatti S., Martinez D., McCready P.M., Medina C., Morgan J., Nelson K., Nolan M., Ovcharenko I., Pitluck S., Pollard M., Popkie A.P., Predki P., Quan G., Ramirez L., Rash S., Retterer J., Rodriguez A., Rogers S., Salamov A., Salazar A., She X., Smith D., Slezak T., Solovyev V., Thayer N., Tice H., Tsai M., Ustaszewska A., Vo N., Wagner M., Wheeler J., Wu K., Xie G., Yang J., Dubchak I., Furey T.S., DeJong P., Dickson M., Gordon D., Eichler E.E., Pennacchio L.A., Richardson P., Stubbs L., Rokhsar D.S., Myers R.M., Rubin E.M., Lucas S.M.
    Nature 428:529-535(2004) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Entry informationi

Entry nameiF90AR_HUMAN
AccessioniPrimary (citable) accession number: A6NNH2
Entry historyi
Integrated into UniProtKB/Swiss-Prot: September 11, 2007
Last sequence update: July 22, 2008
Last modified: January 7, 2015
This is version 45 of the entry and version 2 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program
DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Human chromosome 19
    Human chromosome 19: entries, gene names and cross-references to MIM
  2. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.