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A6NNH0

- GATL1_HUMAN

UniProt

A6NNH0 - GATL1_HUMAN

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Protein

GATS-like protein 1

Gene
GATSL1
Organism
Homo sapiens (Human)
Status
Reviewed - Annotation score: 1 out of 5 - Protein inferred from homologyi

Names & Taxonomyi

Protein namesi
Recommended name:
GATS-like protein 1
Gene namesi
Name:GATSL1
OrganismiHomo sapiens (Human)
Taxonomic identifieri9606 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaeHomo
ProteomesiUP000005640: Chromosome 7

Organism-specific databases

HGNCiHGNC:37072. GATSL1.

Pathology & Biotechi

Organism-specific databases

PharmGKBiPA164720214.

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 329329GATS-like protein 1PRO_0000341303Add
BLAST

Proteomic databases

PaxDbiA6NNH0.
PRIDEiA6NNH0.

PTM databases

PhosphoSiteiA6NNH0.

Expressioni

Gene expression databases

BgeeiA6NNH0.
GenevestigatoriA6NNH0.

Interactioni

Protein-protein interaction databases

BioGridi133171. 1 interaction.
STRINGi9606.ENSP00000354869.

Structurei

3D structure databases

ProteinModelPortaliA6NNH0.
SMRiA6NNH0. Positions 1-149, 225-327.

Family & Domainsi

Sequence similaritiesi

Belongs to the GATS family.

Phylogenomic databases

eggNOGiNOG39497.
HOGENOMiHOG000253004.
HOVERGENiHBG107937.
InParanoidiA6NNH0.
OMAiYEISIVA.
OrthoDBiEOG78SQJ5.
TreeFamiTF331648.

Family and domain databases

InterProiIPR026249. GATS-like.
IPR027795. GATS-like_ACT_dom.
[Graphical view]
PfamiPF13840. ACT_7. 2 hits.
[Graphical view]
PRINTSiPR02078. GATSLIKEFMLY.

Sequencei

Sequence statusi: Complete.

A6NNH0-1 [UniParc]FASTAAdd to Basket

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MELHILEHRL QVASVANESI PLFTYGLIKL AFLSSKTRCK FFSLTETPED    50
YTIIVDEEGF LELPSSEHLS VADATWLALN VVSGGGSFSS SQPIGVTKIA 100
KSVIAPLADQ NISVFMLSTY QTDFILVRER DLPFVTHTLS SEFTILRVVN 150
GETVAAENLG ITNGFVKPKL VQRPVIHPLS SPSNRFCVTS LDPDTLPAVA 200
TLLMDVMFYS NGVKDPMATG DDCGHIRFFS FSLIEGYISL VMDVQTQQRF 250
PSNLLFTSAS GELWKMVRIG GQPLGFDECG IVAQISEPLA AADIPAYYIS 300
TFKFDHALVP EENINGVISA LKVSQAEKH 329
Length:329
Mass (Da):36,042
Last modified:June 10, 2008 - v2
Checksum:iFFF79FFD5D9F51B0
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AC004166 Genomic DNA. No translation available.
AC124781 Genomic DNA. No translation available.
UniGeneiHs.647031.
Hs.647048.
Hs.647505.

Genome annotation databases

EnsembliENST00000361825; ENSP00000354869; ENSG00000183086.
UCSCiuc003ubo.2. human.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AC004166 Genomic DNA. No translation available.
AC124781 Genomic DNA. No translation available.
UniGenei Hs.647031.
Hs.647048.
Hs.647505.

3D structure databases

ProteinModelPortali A6NNH0.
SMRi A6NNH0. Positions 1-149, 225-327.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

BioGridi 133171. 1 interaction.
STRINGi 9606.ENSP00000354869.

PTM databases

PhosphoSitei A6NNH0.

Proteomic databases

PaxDbi A6NNH0.
PRIDEi A6NNH0.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

Ensembli ENST00000361825 ; ENSP00000354869 ; ENSG00000183086 .
UCSCi uc003ubo.2. human.

Organism-specific databases

GeneCardsi GC07P074379.
HGNCi HGNC:37072. GATSL1.
neXtProti NX_A6NNH0.
PharmGKBi PA164720214.
GenAtlasi Search...

Phylogenomic databases

eggNOGi NOG39497.
HOGENOMi HOG000253004.
HOVERGENi HBG107937.
InParanoidi A6NNH0.
OMAi YEISIVA.
OrthoDBi EOG78SQJ5.
TreeFami TF331648.

Miscellaneous databases

NextBioi 102913.
PROi A6NNH0.

Gene expression databases

Bgeei A6NNH0.
Genevestigatori A6NNH0.

Family and domain databases

InterProi IPR026249. GATS-like.
IPR027795. GATS-like_ACT_dom.
[Graphical view ]
Pfami PF13840. ACT_7. 2 hits.
[Graphical view ]
PRINTSi PR02078. GATSLIKEFMLY.
ProtoNeti Search...

Publicationsi

  1. "The DNA sequence of human chromosome 7."
    Hillier L.W., Fulton R.S., Fulton L.A., Graves T.A., Pepin K.H., Wagner-McPherson C., Layman D., Maas J., Jaeger S., Walker R., Wylie K., Sekhon M., Becker M.C., O'Laughlin M.D., Schaller M.E., Fewell G.A., Delehaunty K.D., Miner T.L.
    , Nash W.E., Cordes M., Du H., Sun H., Edwards J., Bradshaw-Cordum H., Ali J., Andrews S., Isak A., Vanbrunt A., Nguyen C., Du F., Lamar B., Courtney L., Kalicki J., Ozersky P., Bielicki L., Scott K., Holmes A., Harkins R., Harris A., Strong C.M., Hou S., Tomlinson C., Dauphin-Kohlberg S., Kozlowicz-Reilly A., Leonard S., Rohlfing T., Rock S.M., Tin-Wollam A.-M., Abbott A., Minx P., Maupin R., Strowmatt C., Latreille P., Miller N., Johnson D., Murray J., Woessner J.P., Wendl M.C., Yang S.-P., Schultz B.R., Wallis J.W., Spieth J., Bieri T.A., Nelson J.O., Berkowicz N., Wohldmann P.E., Cook L.L., Hickenbotham M.T., Eldred J., Williams D., Bedell J.A., Mardis E.R., Clifton S.W., Chissoe S.L., Marra M.A., Raymond C., Haugen E., Gillett W., Zhou Y., James R., Phelps K., Iadanoto S., Bubb K., Simms E., Levy R., Clendenning J., Kaul R., Kent W.J., Furey T.S., Baertsch R.A., Brent M.R., Keibler E., Flicek P., Bork P., Suyama M., Bailey J.A., Portnoy M.E., Torrents D., Chinwalla A.T., Gish W.R., Eddy S.R., McPherson J.D., Olson M.V., Eichler E.E., Green E.D., Waterston R.H., Wilson R.K.
    Nature 424:157-164(2003) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Entry informationi

Entry nameiGATL1_HUMAN
AccessioniPrimary (citable) accession number: A6NNH0
Entry historyi
Integrated into UniProtKB/Swiss-Prot: June 10, 2008
Last sequence update: June 10, 2008
Last modified: July 9, 2014
This is version 49 of the entry and version 2 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program
DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Human chromosome 7
    Human chromosome 7: entries, gene names and cross-references to MIM
  2. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3

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