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Protein

GATS-like protein 1

Gene

GATSL1

Organism
Homo sapiens (Human)
Status
Reviewed-Annotation score: Annotation score: 1 out of 5-Protein inferred from homologyi

Names & Taxonomyi

Protein namesi
Recommended name:
GATS-like protein 1
Gene namesi
Name:GATSL1
OrganismiHomo sapiens (Human)
Taxonomic identifieri9606 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaeHomo
ProteomesiUP000005640 Componenti: Unplaced

Organism-specific databases

HGNCiHGNC:37072. GATSL1.

Pathology & Biotechi

Organism-specific databases

PharmGKBiPA164720214.

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 329329GATS-like protein 1PRO_0000341303Add
BLAST

Proteomic databases

PaxDbiA6NNH0.
PRIDEiA6NNH0.

PTM databases

PhosphoSiteiA6NNH0.

Expressioni

Gene expression databases

BgeeiA6NNH0.

Organism-specific databases

HPAiHPA057229.

Structurei

3D structure databases

ProteinModelPortaliA6NNH0.
SMRiA6NNH0. Positions 1-149, 225-327.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the GATS family.Curated

Phylogenomic databases

eggNOGiNOG39497.
HOGENOMiHOG000253004.
HOVERGENiHBG107937.
InParanoidiA6NNH0.
OMAiFVLIKER.
OrthoDBiEOG78SQJ5.
TreeFamiTF331648.

Family and domain databases

InterProiIPR026249. GATS-like.
IPR027795. GATS-like_ACT_dom.
[Graphical view]
PfamiPF13840. ACT_7. 2 hits.
[Graphical view]
PRINTSiPR02078. GATSLIKEFMLY.

Sequencei

Sequence statusi: Complete.

A6NNH0-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MELHILEHRL QVASVANESI PLFTYGLIKL AFLSSKTRCK FFSLTETPED
60 70 80 90 100
YTIIVDEEGF LELPSSEHLS VADATWLALN VVSGGGSFSS SQPIGVTKIA
110 120 130 140 150
KSVIAPLADQ NISVFMLSTY QTDFILVRER DLPFVTHTLS SEFTILRVVN
160 170 180 190 200
GETVAAENLG ITNGFVKPKL VQRPVIHPLS SPSNRFCVTS LDPDTLPAVA
210 220 230 240 250
TLLMDVMFYS NGVKDPMATG DDCGHIRFFS FSLIEGYISL VMDVQTQQRF
260 270 280 290 300
PSNLLFTSAS GELWKMVRIG GQPLGFDECG IVAQISEPLA AADIPAYYIS
310 320
TFKFDHALVP EENINGVISA LKVSQAEKH
Length:329
Mass (Da):36,042
Last modified:June 10, 2008 - v2
Checksum:iFFF79FFD5D9F51B0
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC004166 Genomic DNA. No translation available.
AC124781 Genomic DNA. No translation available.
UniGeneiHs.594823.
Hs.647031.
Hs.647048.
Hs.647505.

Genome annotation databases

UCSCiuc003ubo.2. human.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC004166 Genomic DNA. No translation available.
AC124781 Genomic DNA. No translation available.
UniGeneiHs.594823.
Hs.647031.
Hs.647048.
Hs.647505.

3D structure databases

ProteinModelPortaliA6NNH0.
SMRiA6NNH0. Positions 1-149, 225-327.
ModBaseiSearch...
MobiDBiSearch...

PTM databases

PhosphoSiteiA6NNH0.

Proteomic databases

PaxDbiA6NNH0.
PRIDEiA6NNH0.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

UCSCiuc003ubo.2. human.

Organism-specific databases

GeneCardsiGC07P074379.
HGNCiHGNC:37072. GATSL1.
HPAiHPA057229.
neXtProtiNX_A6NNH0.
PharmGKBiPA164720214.
GenAtlasiSearch...

Phylogenomic databases

eggNOGiNOG39497.
HOGENOMiHOG000253004.
HOVERGENiHBG107937.
InParanoidiA6NNH0.
OMAiFVLIKER.
OrthoDBiEOG78SQJ5.
TreeFamiTF331648.

Miscellaneous databases

NextBioi102913.
PROiA6NNH0.

Gene expression databases

BgeeiA6NNH0.

Family and domain databases

InterProiIPR026249. GATS-like.
IPR027795. GATS-like_ACT_dom.
[Graphical view]
PfamiPF13840. ACT_7. 2 hits.
[Graphical view]
PRINTSiPR02078. GATSLIKEFMLY.
ProtoNetiSearch...

Publicationsi

  1. "The DNA sequence of human chromosome 7."
    Hillier L.W., Fulton R.S., Fulton L.A., Graves T.A., Pepin K.H., Wagner-McPherson C., Layman D., Maas J., Jaeger S., Walker R., Wylie K., Sekhon M., Becker M.C., O'Laughlin M.D., Schaller M.E., Fewell G.A., Delehaunty K.D., Miner T.L.
    , Nash W.E., Cordes M., Du H., Sun H., Edwards J., Bradshaw-Cordum H., Ali J., Andrews S., Isak A., Vanbrunt A., Nguyen C., Du F., Lamar B., Courtney L., Kalicki J., Ozersky P., Bielicki L., Scott K., Holmes A., Harkins R., Harris A., Strong C.M., Hou S., Tomlinson C., Dauphin-Kohlberg S., Kozlowicz-Reilly A., Leonard S., Rohlfing T., Rock S.M., Tin-Wollam A.-M., Abbott A., Minx P., Maupin R., Strowmatt C., Latreille P., Miller N., Johnson D., Murray J., Woessner J.P., Wendl M.C., Yang S.-P., Schultz B.R., Wallis J.W., Spieth J., Bieri T.A., Nelson J.O., Berkowicz N., Wohldmann P.E., Cook L.L., Hickenbotham M.T., Eldred J., Williams D., Bedell J.A., Mardis E.R., Clifton S.W., Chissoe S.L., Marra M.A., Raymond C., Haugen E., Gillett W., Zhou Y., James R., Phelps K., Iadanoto S., Bubb K., Simms E., Levy R., Clendenning J., Kaul R., Kent W.J., Furey T.S., Baertsch R.A., Brent M.R., Keibler E., Flicek P., Bork P., Suyama M., Bailey J.A., Portnoy M.E., Torrents D., Chinwalla A.T., Gish W.R., Eddy S.R., McPherson J.D., Olson M.V., Eichler E.E., Green E.D., Waterston R.H., Wilson R.K.
    Nature 424:157-164(2003) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Entry informationi

Entry nameiGATL1_HUMAN
AccessioniPrimary (citable) accession number: A6NNH0
Entry historyi
Integrated into UniProtKB/Swiss-Prot: June 10, 2008
Last sequence update: June 10, 2008
Last modified: June 24, 2015
This is version 53 of the entry and version 2 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program
DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Human chromosome 7
    Human chromosome 7: entries, gene names and cross-references to MIM
  2. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.