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Protein

Golgin subfamily A member 8J

Gene

GOLGA8J

Organism
Homo sapiens (Human)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Names & Taxonomyi

Protein namesi
Recommended name:
Golgin subfamily A member 8J
Gene namesi
Name:GOLGA8J
OrganismiHomo sapiens (Human)
Taxonomic identifieri9606 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaeHomo
ProteomesiUP000005640 Componentsi: Chromosome 15, Unplaced

Organism-specific databases

HGNCiHGNC:38650. GOLGA8J.

Subcellular locationi

GO - Cellular componenti

Complete GO annotation...

Pathology & Biotechi

Organism-specific databases

PharmGKBiPA165478975.

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 632632Golgin subfamily A member 8JPRO_0000332313Add
BLAST

Proteomic databases

PaxDbiA6NMD2.
PRIDEiA6NMD2.

PTM databases

PhosphoSiteiA6NMD2.

Expressioni

Gene expression databases

BgeeiA6NMD2.

Organism-specific databases

HPAiHPA045397.

Interactioni

Protein-protein interaction databases

BioGridi575504. 1 interaction.
STRINGi9606.ENSP00000456401.

Structurei

3D structure databases

ProteinModelPortaliA6NMD2.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Coiled coil

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Coiled coili86 – 15469Sequence AnalysisAdd
BLAST
Coiled coili220 – 421202Sequence AnalysisAdd
BLAST

Sequence similaritiesi

Belongs to the GOLGA8 family.Curated

Keywords - Domaini

Coiled coil

Phylogenomic databases

eggNOGiKOG4725.
GeneTreeiENSGT00530000062932.
HOVERGENiHBG051752.
InParanoidiA6NMD2.
OrthoDBiEOG71P29T.
TreeFamiTF316990.

Family and domain databases

InterProiIPR024858. Golgin_A.
[Graphical view]
PANTHERiPTHR10881. PTHR10881. 1 hit.
PfamiPF15070. GOLGA2L5. 3 hits.
[Graphical view]

Sequencei

Sequence statusi: Complete.

A6NMD2-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MAEETQHNKL AAAKKKLKEY WQKNSPRVPA GANRNRKTNG SIPEKATSGG
60 70 80 90 100
CQPPRDSATG FHREGPTSSA TLKDLESPCQ ERAVVLDSRS VEISQLKNTI
110 120 130 140 150
KSLKQQKKQV EHQLEEEKKA NNKKQKAKRV LEVQIQTLNI QKEELNTDLY
160 170 180 190 200
HMKRSLRYFE EKSKDLAVRL QHSLQRKGEL ESVLSNVMAT QKKKANQLSS
210 220 230 240 250
RSKARTEWKL EQSMREEALL KVQLTQFKES FQQVQLERDE YSEHLKGERA
260 270 280 290 300
RWQQRMRKMS QEICTLKKEK QQDMRRVEKL ERSLSKLKNQ MAEPLPPEPP
310 320 330 340 350
AVPSEVELQH LRKELERVAG ELQAQVKNNQ RISLLNQRQE ERIREQEERL
360 370 380 390 400
RKQEERIQEQ HKSLQQLAKP QSVFKEPNNE NKNALQLEQQ VKELQEKLGE
410 420 430 440 450
EHLEAASQQN QQLTAQLSLM ALPGEGHGGE HLDSEGEEAP RPMPSVPEDP
460 470 480 490 500
ESREAMSSFM DHLEEKADLS ELVKKKELCF IHHWRERCHQ KTHHLLSEPG
510 520 530 540 550
GRAKDAALGG GHHQAGAQGG DEGEAAGAAA DGIAAYSNYN NGHRKFLAAA
560 570 580 590 600
HNSADEPGPG APAPQELGAA DKHGHLCEVS LTSSAQGEAR EDPLLDKPTA
610 620 630
QPIVQDHQEH PGLGSNCCVP FLCWAWLPRR RR
Length:632
Mass (Da):71,775
Last modified:May 14, 2014 - v3
Checksum:i13C914769F4D6692
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC120045 Genomic DNA. No translation available.
CCDSiCCDS61574.1.
RefSeqiNP_001269401.1. NM_001282472.1.
UniGeneiHs.574257.
Hs.649690.

Genome annotation databases

EnsembliENST00000567927; ENSP00000456401; ENSG00000179938.
ENST00000611771; ENSP00000480494; ENSG00000278119.
GeneIDi653073.
KEGGihsa:653073.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC120045 Genomic DNA. No translation available.
CCDSiCCDS61574.1.
RefSeqiNP_001269401.1. NM_001282472.1.
UniGeneiHs.574257.
Hs.649690.

3D structure databases

ProteinModelPortaliA6NMD2.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

BioGridi575504. 1 interaction.
STRINGi9606.ENSP00000456401.

PTM databases

PhosphoSiteiA6NMD2.

Proteomic databases

PaxDbiA6NMD2.
PRIDEiA6NMD2.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENST00000567927; ENSP00000456401; ENSG00000179938.
ENST00000611771; ENSP00000480494; ENSG00000278119.
GeneIDi653073.
KEGGihsa:653073.

Organism-specific databases

CTDi653073.
GeneCardsiGC15P030377.
HGNCiHGNC:38650. GOLGA8J.
HPAiHPA045397.
neXtProtiNX_A6NMD2.
PharmGKBiPA165478975.
GenAtlasiSearch...

Phylogenomic databases

eggNOGiKOG4725.
GeneTreeiENSGT00530000062932.
HOVERGENiHBG051752.
InParanoidiA6NMD2.
OrthoDBiEOG71P29T.
TreeFamiTF316990.

Miscellaneous databases

NextBioi21547473.
PROiA6NMD2.

Gene expression databases

BgeeiA6NMD2.

Family and domain databases

InterProiIPR024858. Golgin_A.
[Graphical view]
PANTHERiPTHR10881. PTHR10881. 1 hit.
PfamiPF15070. GOLGA2L5. 3 hits.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "Analysis of the DNA sequence and duplication history of human chromosome 15."
    Zody M.C., Garber M., Sharpe T., Young S.K., Rowen L., O'Neill K., Whittaker C.A., Kamal M., Chang J.L., Cuomo C.A., Dewar K., FitzGerald M.G., Kodira C.D., Madan A., Qin S., Yang X., Abbasi N., Abouelleil A.
    , Arachchi H.M., Baradarani L., Birditt B., Bloom S., Bloom T., Borowsky M.L., Burke J., Butler J., Cook A., DeArellano K., DeCaprio D., Dorris L. III, Dors M., Eichler E.E., Engels R., Fahey J., Fleetwood P., Friedman C., Gearin G., Hall J.L., Hensley G., Johnson E., Jones C., Kamat A., Kaur A., Locke D.P., Madan A., Munson G., Jaffe D.B., Lui A., Macdonald P., Mauceli E., Naylor J.W., Nesbitt R., Nicol R., O'Leary S.B., Ratcliffe A., Rounsley S., She X., Sneddon K.M.B., Stewart S., Sougnez C., Stone S.M., Topham K., Vincent D., Wang S., Zimmer A.R., Birren B.W., Hood L., Lander E.S., Nusbaum C.
    Nature 440:671-675(2006) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Entry informationi

Entry nameiGOG8J_HUMAN
AccessioniPrimary (citable) accession number: A6NMD2
Secondary accession number(s): H3BRU0
Entry historyi
Integrated into UniProtKB/Swiss-Prot: April 29, 2008
Last sequence update: May 14, 2014
Last modified: June 24, 2015
This is version 48 of the entry and version 3 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program
DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Human chromosome 15
    Human chromosome 15: entries, gene names and cross-references to MIM
  2. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.