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A6NLI5

- TR64C_HUMAN

UniProt

A6NLI5 - TR64C_HUMAN

Protein

Putative tripartite motif-containing protein 64C

Gene

TRIM64C

Organism
Homo sapiens (Human)
Status
Reviewed - Annotation score: 2 out of 5- Protein uncertaini
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    • History
      Entry version 61 (01 Oct 2014)
      Sequence version 3 (01 Jul 2008)
      Previous versions | rss
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    Functioni

    Regions

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Zinc fingeri15 – 5642RING-typePROSITE-ProRule annotationAdd
    BLAST
    Zinc fingeri87 – 12842B box-typePROSITE-ProRule annotationAdd
    BLAST

    GO - Molecular functioni

    1. zinc ion binding Source: InterPro

    Keywords - Ligandi

    Metal-binding, Zinc

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Putative tripartite motif-containing protein 64C
    Gene namesi
    Name:TRIM64C
    OrganismiHomo sapiens (Human)
    Taxonomic identifieri9606 [NCBI]
    Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaeHomo
    ProteomesiUP000005640: Unplaced

    Organism-specific databases

    HGNCiHGNC:37148. TRIM64C.

    Subcellular locationi

    GO - Cellular componenti

    1. intracellular Source: InterPro

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Chaini1 – 447447Putative tripartite motif-containing protein 64CPRO_0000340248Add
    BLAST

    Proteomic databases

    PaxDbiA6NLI5.
    PRIDEiA6NLI5.

    Expressioni

    Gene expression databases

    GenevestigatoriA6NLI5.

    Organism-specific databases

    HPAiHPA045370.

    Structurei

    3D structure databases

    ProteinModelPortaliA6NLI5.
    SMRiA6NLI5. Positions 8-57, 296-445.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Domains and Repeats

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Domaini266 – 447182B30.2/SPRYPROSITE-ProRule annotationAdd
    BLAST

    Coiled coil

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Coiled coili186 – 21833Sequence AnalysisAdd
    BLAST

    Sequence similaritiesi

    Belongs to the TRIM/RBCC family.Curated
    Contains 1 B box-type zinc finger.PROSITE-ProRule annotation
    Contains 1 B30.2/SPRY domain.PROSITE-ProRule annotation
    Contains 1 RING-type zinc finger.PROSITE-ProRule annotation

    Zinc finger

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Zinc fingeri15 – 5642RING-typePROSITE-ProRule annotationAdd
    BLAST
    Zinc fingeri87 – 12842B box-typePROSITE-ProRule annotationAdd
    BLAST

    Keywords - Domaini

    Coiled coil, Zinc-finger

    Phylogenomic databases

    eggNOGiNOG260754.
    HOGENOMiHOG000234135.
    HOVERGENiHBG108727.
    InParanoidiA6NLI5.
    PhylomeDBiA6NLI5.

    Family and domain databases

    Gene3Di3.30.40.10. 1 hit.
    4.10.45.10. 1 hit.
    InterProiIPR001870. B30.2/SPRY.
    IPR003879. Butyrophylin.
    IPR008985. ConA-like_lec_gl_sf.
    IPR003877. SPRY_rcpt.
    IPR000315. Znf_B-box.
    IPR001841. Znf_RING.
    IPR013083. Znf_RING/FYVE/PHD.
    IPR017907. Znf_RING_CS.
    [Graphical view]
    PfamiPF00622. SPRY. 1 hit.
    PF00643. zf-B_box. 1 hit.
    [Graphical view]
    PRINTSiPR01407. BUTYPHLNCDUF.
    SMARTiSM00336. BBOX. 1 hit.
    SM00184. RING. 1 hit.
    [Graphical view]
    SUPFAMiSSF49899. SSF49899. 1 hit.
    PROSITEiPS50188. B302_SPRY. 1 hit.
    PS50119. ZF_BBOX. 1 hit.
    PS00518. ZF_RING_1. 1 hit.
    PS50089. ZF_RING_2. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    A6NLI5-1 [UniParc]FASTAAdd to Basket

    « Hide

    MDSDTLRVFQ NELICCICVN YFIDPVTTDC VHSFCRPCLC LCSEEGRAPM    50
    RCPLCRKISE KPNFNTNVAL KKLASLARQT RPQNINSSDN ICVLHEETKE 100
    LFCEADKRLL CGPCSESPEH MAHSHSPIGW AAEECREKLI KEMDYLWKIN 150
    QETQNNLNQE TSKFCSLVED KRNRIVYRYQ KMHIFLDEEE QRHLQALERE 200
    AKELFQQLQD SQVRMTQHLE GMKDMYRELW ETYHMPDVEL LQDVGNISAS 250
    RTDLAQMPKP QPVNPELTSW CITGVLDMLN NFRVDNALST EMTPCYISLS 300
    EDVRRVIFGD DHRSAPMDPQ GVESFAVWCA QAFTSGKHYW EVDVTHSSNW 350
    ILGVCRDSRT ADTNIVIDSD KTFFSISSKT SNHYSLSTNS PPLIQYVQRP 400
    LGWVGVFLDY DNGSVSFFDV SKGSLIYGFP PSSFSSPLRP FFCFGCT 447
    Length:447
    Mass (Da):51,329
    Last modified:July 1, 2008 - v3
    Checksum:i36F65FB726EDA4D3
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AC084851 Genomic DNA. No translation available.
    UniGeneiHs.740240.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AC084851 Genomic DNA. No translation available.
    UniGenei Hs.740240.

    3D structure databases

    ProteinModelPortali A6NLI5.
    SMRi A6NLI5. Positions 8-57, 296-445.
    ModBasei Search...
    MobiDBi Search...

    Proteomic databases

    PaxDbi A6NLI5.
    PRIDEi A6NLI5.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Organism-specific databases

    GeneCardsi GC11M049075.
    HGNCi HGNC:37148. TRIM64C.
    HPAi HPA045370.
    neXtProti NX_A6NLI5.
    GenAtlasi Search...

    Phylogenomic databases

    eggNOGi NOG260754.
    HOGENOMi HOG000234135.
    HOVERGENi HBG108727.
    InParanoidi A6NLI5.
    PhylomeDBi A6NLI5.

    Gene expression databases

    Genevestigatori A6NLI5.

    Family and domain databases

    Gene3Di 3.30.40.10. 1 hit.
    4.10.45.10. 1 hit.
    InterProi IPR001870. B30.2/SPRY.
    IPR003879. Butyrophylin.
    IPR008985. ConA-like_lec_gl_sf.
    IPR003877. SPRY_rcpt.
    IPR000315. Znf_B-box.
    IPR001841. Znf_RING.
    IPR013083. Znf_RING/FYVE/PHD.
    IPR017907. Znf_RING_CS.
    [Graphical view ]
    Pfami PF00622. SPRY. 1 hit.
    PF00643. zf-B_box. 1 hit.
    [Graphical view ]
    PRINTSi PR01407. BUTYPHLNCDUF.
    SMARTi SM00336. BBOX. 1 hit.
    SM00184. RING. 1 hit.
    [Graphical view ]
    SUPFAMi SSF49899. SSF49899. 1 hit.
    PROSITEi PS50188. B302_SPRY. 1 hit.
    PS50119. ZF_BBOX. 1 hit.
    PS00518. ZF_RING_1. 1 hit.
    PS50089. ZF_RING_2. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

    Entry informationi

    Entry nameiTR64C_HUMAN
    AccessioniPrimary (citable) accession number: A6NLI5
    Entry historyi
    Integrated into UniProtKB/Swiss-Prot: June 10, 2008
    Last sequence update: July 1, 2008
    Last modified: October 1, 2014
    This is version 61 of the entry and version 3 of the sequence. [Complete history]
    Entry statusiReviewed (UniProtKB/Swiss-Prot)
    Annotation programChordata Protein Annotation Program
    DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.

    Miscellaneousi

    Caution

    Could be the product of a pseudogene.Curated

    Keywords - Technical termi

    Complete proteome, Reference proteome

    Documents

    1. Human chromosome 11
      Human chromosome 11: entries, gene names and cross-references to MIM
    2. SIMILARITY comments
      Index of protein domains and families

    External Data

    Dasty 3