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A6NLC5

- CC070_HUMAN

UniProt

A6NLC5 - CC070_HUMAN

Protein

UPF0524 protein C3orf70

Gene

C3orf70

Organism
Homo sapiens (Human)
Status
Reviewed - Annotation score: 1 out of 5- Experimental evidence at transcript leveli
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    • History
      Entry version 53 (01 Oct 2014)
      Sequence version 1 (24 Jul 2007)
      Previous versions | rss
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    Names & Taxonomyi

    Protein namesi
    Recommended name:
    UPF0524 protein C3orf70
    Gene namesi
    Name:C3orf70
    OrganismiHomo sapiens (Human)
    Taxonomic identifieri9606 [NCBI]
    Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaeHomo
    ProteomesiUP000005640: Chromosome 3

    Organism-specific databases

    HGNCiHGNC:33731. C3orf70.

    Pathology & Biotechi

    Organism-specific databases

    PharmGKBiPA162379707.

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Chaini1 – 250250UPF0524 protein C3orf70PRO_0000319976Add
    BLAST

    Proteomic databases

    PaxDbiA6NLC5.
    PRIDEiA6NLC5.

    PTM databases

    PhosphoSiteiA6NLC5.

    Expressioni

    Gene expression databases

    BgeeiA6NLC5.
    CleanExiHS_C3orf70.
    GenevestigatoriA6NLC5.

    Organism-specific databases

    HPAiHPA041861.

    Structurei

    3D structure databases

    ProteinModelPortaliA6NLC5.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the UPF0524 family.Curated

    Phylogenomic databases

    eggNOGiNOG40600.
    HOGENOMiHOG000043069.
    HOVERGENiHBG095343.
    InParanoidiA6NLC5.
    OMAiAPERGWK.
    OrthoDBiEOG7QC7XH.
    PhylomeDBiA6NLC5.
    TreeFamiTF328625.

    Family and domain databases

    InterProiIPR029670. UPF0524_fam.
    [Graphical view]
    PANTHERiPTHR31785:SF2. PTHR31785:SF2. 1 hit.

    Sequencei

    Sequence statusi: Complete.

    A6NLC5-1 [UniParc]FASTAAdd to Basket

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    MSAAASPASE RGWKSEKLDE AQALARSCAA RRPDFQPCDG LSICATHSHG    50
    KCFKLHWCCH LGWCHCKYMY QPMTPVEQLP STEIPARPRE PTNTIQISVS 100
    LTEHFLKFAS VFQPPLPPDS PRYCMISDLF IDNYQVKCIN GKMCYVQKQP 150
    APHSHRMSPE EVSAHDALIS KESNTPKIDH CSSPSSSEDS GINAIGAHYV 200
    ESCDEDTEEG AELSSEEDYS PESSWEPDEC TLLSPSQSDL EVIETIETTV 250
    Length:250
    Mass (Da):27,769
    Last modified:July 24, 2007 - v1
    Checksum:i5B2930FDE8905AC3
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AC025573 Genomic DNA. No translation available.
    CH471052 Genomic DNA. Translation: EAW78232.1.
    BC137178 mRNA. Translation: AAI37179.1.
    BC137179 mRNA. Translation: AAI37180.1.
    BC150565 mRNA. Translation: AAI50566.1.
    CCDSiCCDS33900.1.
    RefSeqiNP_001020437.1. NM_001025266.1.
    UniGeneiHs.380048.

    Genome annotation databases

    EnsembliENST00000335012; ENSP00000334974; ENSG00000187068.
    GeneIDi285382.
    KEGGihsa:285382.
    UCSCiuc003fpd.3. human.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AC025573 Genomic DNA. No translation available.
    CH471052 Genomic DNA. Translation: EAW78232.1 .
    BC137178 mRNA. Translation: AAI37179.1 .
    BC137179 mRNA. Translation: AAI37180.1 .
    BC150565 mRNA. Translation: AAI50566.1 .
    CCDSi CCDS33900.1.
    RefSeqi NP_001020437.1. NM_001025266.1.
    UniGenei Hs.380048.

    3D structure databases

    ProteinModelPortali A6NLC5.
    ModBasei Search...
    MobiDBi Search...

    PTM databases

    PhosphoSitei A6NLC5.

    Proteomic databases

    PaxDbi A6NLC5.
    PRIDEi A6NLC5.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    Ensembli ENST00000335012 ; ENSP00000334974 ; ENSG00000187068 .
    GeneIDi 285382.
    KEGGi hsa:285382.
    UCSCi uc003fpd.3. human.

    Organism-specific databases

    CTDi 285382.
    GeneCardsi GC03M184795.
    HGNCi HGNC:33731. C3orf70.
    HPAi HPA041861.
    neXtProti NX_A6NLC5.
    PharmGKBi PA162379707.
    GenAtlasi Search...

    Phylogenomic databases

    eggNOGi NOG40600.
    HOGENOMi HOG000043069.
    HOVERGENi HBG095343.
    InParanoidi A6NLC5.
    OMAi APERGWK.
    OrthoDBi EOG7QC7XH.
    PhylomeDBi A6NLC5.
    TreeFami TF328625.

    Miscellaneous databases

    ChiTaRSi C3orf70. human.
    GenomeRNAii 285382.
    NextBioi 95491.

    Gene expression databases

    Bgeei A6NLC5.
    CleanExi HS_C3orf70.
    Genevestigatori A6NLC5.

    Family and domain databases

    InterProi IPR029670. UPF0524_fam.
    [Graphical view ]
    PANTHERi PTHR31785:SF2. PTHR31785:SF2. 1 hit.
    ProtoNeti Search...

    Publicationsi

    1. "The DNA sequence, annotation and analysis of human chromosome 3."
      Muzny D.M., Scherer S.E., Kaul R., Wang J., Yu J., Sudbrak R., Buhay C.J., Chen R., Cree A., Ding Y., Dugan-Rocha S., Gill R., Gunaratne P., Harris R.A., Hawes A.C., Hernandez J., Hodgson A.V., Hume J.
      , Jackson A., Khan Z.M., Kovar-Smith C., Lewis L.R., Lozado R.J., Metzker M.L., Milosavljevic A., Miner G.R., Morgan M.B., Nazareth L.V., Scott G., Sodergren E., Song X.-Z., Steffen D., Wei S., Wheeler D.A., Wright M.W., Worley K.C., Yuan Y., Zhang Z., Adams C.Q., Ansari-Lari M.A., Ayele M., Brown M.J., Chen G., Chen Z., Clendenning J., Clerc-Blankenburg K.P., Chen R., Chen Z., Davis C., Delgado O., Dinh H.H., Dong W., Draper H., Ernst S., Fu G., Gonzalez-Garay M.L., Garcia D.K., Gillett W., Gu J., Hao B., Haugen E., Havlak P., He X., Hennig S., Hu S., Huang W., Jackson L.R., Jacob L.S., Kelly S.H., Kube M., Levy R., Li Z., Liu B., Liu J., Liu W., Lu J., Maheshwari M., Nguyen B.-V., Okwuonu G.O., Palmeiri A., Pasternak S., Perez L.M., Phelps K.A., Plopper F.J., Qiang B., Raymond C., Rodriguez R., Saenphimmachak C., Santibanez J., Shen H., Shen Y., Subramanian S., Tabor P.E., Verduzco D., Waldron L., Wang J., Wang J., Wang Q., Williams G.A., Wong G.K.-S., Yao Z., Zhang J., Zhang X., Zhao G., Zhou J., Zhou Y., Nelson D., Lehrach H., Reinhardt R., Naylor S.L., Yang H., Olson M., Weinstock G., Gibbs R.A.
      Nature 440:1194-1198(2006) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    2. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    3. "The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)."
      The MGC Project Team
      Genome Res. 14:2121-2127(2004) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
      Tissue: Brain.

    Entry informationi

    Entry nameiCC070_HUMAN
    AccessioniPrimary (citable) accession number: A6NLC5
    Secondary accession number(s): B2RNY2, B9EH83
    Entry historyi
    Integrated into UniProtKB/Swiss-Prot: February 26, 2008
    Last sequence update: July 24, 2007
    Last modified: October 1, 2014
    This is version 53 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiReviewed (UniProtKB/Swiss-Prot)
    Annotation programChordata Protein Annotation Program
    DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteome

    Documents

    1. Human chromosome 3
      Human chromosome 3: entries, gene names and cross-references to MIM
    2. SIMILARITY comments
      Index of protein domains and families
    3. Uncharacterized protein families (UPF)
      List of uncharacterized protein family (UPF) entries

    External Data

    Dasty 3