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Protein

GATS-like protein 2

Gene

GATSL2

Organism
Homo sapiens (Human)
Status
Reviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at transcript leveli

Names & Taxonomyi

Protein namesi
Recommended name:
GATS-like protein 2Curated
Gene namesi
Name:GATSL2Imported
Synonyms:GATSL1Imported
OrganismiHomo sapiens (Human)
Taxonomic identifieri9606 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaeHomo
Proteomesi
  • UP000005640 Componenti: Chromosome 7

Organism-specific databases

HGNCiHGNC:37073. GATSL2.

Pathology & Biotechi

Organism-specific databases

PharmGKBiPA164720214.
PA164720237.

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 329329GATS-like protein 2PRO_0000341304Add
BLAST

Proteomic databases

EPDiA6NHX0.
MaxQBiA6NHX0.
PaxDbiA6NHX0.
PRIDEiA6NHX0.

PTM databases

iPTMnetiA6NHX0.
PhosphoSiteiA6NHX0.

Expressioni

Gene expression databases

BgeeiA6NHX0.

Organism-specific databases

HPAiHPA057229.

Interactioni

Protein-protein interaction databases

BioGridi609839. 2 interactions.
IntActiA6NHX0. 1 interaction.
STRINGi9606.ENSP00000452571.

Structurei

3D structure databases

ProteinModelPortaliA6NHX0.
SMRiA6NHX0. Positions 1-149, 224-327.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the GATS family.Curated

Phylogenomic databases

eggNOGiENOG410IJ9B. Eukaryota.
ENOG4111D5N. LUCA.
GeneTreeiENSGT00390000006208.
HOVERGENiHBG107937.
InParanoidiA6NHX0.
OMAiGFVKPKM.
OrthoDBiEOG78SQJ5.
PhylomeDBiA6NHX0.
TreeFamiTF331648.

Family and domain databases

InterProiIPR026249. GATS-like.
IPR027795. GATS-like_ACT_dom.
[Graphical view]
PfamiPF13840. ACT_7. 2 hits.
[Graphical view]
PRINTSiPR02078. GATSLIKEFMLY.

Sequencei

Sequence statusi: Complete.

A6NHX0-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MELHILEHRL QVASVAKESI PLFTYGLIKL AFLSSKTRCK FFSLTETPED
60 70 80 90 100
YTIIVDEEGF LELPSSEHLS VADATWLALN VVSGGGSFSS SQPIGVTKIA
110 120 130 140 150
KSVIAPLADQ NISVFMLSTY QTDFILVRER DLPFVTHTLS SEFTILRVVN
160 170 180 190 200
GETVAAENLG ITNGFVKPKL VQRPVIHPLS SPSNRFCVTS LDPDTLPAVA
210 220 230 240 250
TLLMDVMFYS NGVKDPMATG DDCGHIRFFS FSLIEGYISL VMDVQTQQRF
260 270 280 290 300
PSNLLFTSAS GELWKMVRIG GQPLGFDECG IVAQISEPLA AADIPAYYIS
310 320
TFKFDHALVP EENINGVISA LKVSQAEKH
Length:329
Mass (Da):36,056
Last modified:June 10, 2008 - v3
Checksum:iBC86CEFC0FBC21B2
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC245150 Genomic DNA. No translation available.
BC147030 mRNA. Translation: AAI47031.1.
BC147031 mRNA. Translation: AAI47032.1.
BC150658 mRNA. Translation: AAI50659.1.
CCDSiCCDS75620.1.
RefSeqiNP_001138536.1. NM_001145064.2.
UniGeneiHs.594823.
Hs.647031.
Hs.647048.
Hs.647505.
Hs.728007.

Genome annotation databases

EnsembliENST00000616305; ENSP00000484732; ENSG00000274070.
GeneIDi729438.
KEGGihsa:729438.
UCSCiuc003ucg.4. human.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC245150 Genomic DNA. No translation available.
BC147030 mRNA. Translation: AAI47031.1.
BC147031 mRNA. Translation: AAI47032.1.
BC150658 mRNA. Translation: AAI50659.1.
CCDSiCCDS75620.1.
RefSeqiNP_001138536.1. NM_001145064.2.
UniGeneiHs.594823.
Hs.647031.
Hs.647048.
Hs.647505.
Hs.728007.

3D structure databases

ProteinModelPortaliA6NHX0.
SMRiA6NHX0. Positions 1-149, 224-327.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

BioGridi609839. 2 interactions.
IntActiA6NHX0. 1 interaction.
STRINGi9606.ENSP00000452571.

PTM databases

iPTMnetiA6NHX0.
PhosphoSiteiA6NHX0.

Proteomic databases

EPDiA6NHX0.
MaxQBiA6NHX0.
PaxDbiA6NHX0.
PRIDEiA6NHX0.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENST00000616305; ENSP00000484732; ENSG00000274070.
GeneIDi729438.
KEGGihsa:729438.
UCSCiuc003ucg.4. human.

Organism-specific databases

CTDi729438.
GeneCardsiGATSL2.
HGNCiHGNC:37073. GATSL2.
HPAiHPA057229.
neXtProtiNX_A6NHX0.
PharmGKBiPA164720214.
PA164720237.
GenAtlasiSearch...

Phylogenomic databases

eggNOGiENOG410IJ9B. Eukaryota.
ENOG4111D5N. LUCA.
GeneTreeiENSGT00390000006208.
HOVERGENiHBG107937.
InParanoidiA6NHX0.
OMAiGFVKPKM.
OrthoDBiEOG78SQJ5.
PhylomeDBiA6NHX0.
TreeFamiTF331648.

Miscellaneous databases

GenomeRNAii729438.
NextBioi102913.
PROiA6NHX0.

Gene expression databases

BgeeiA6NHX0.

Family and domain databases

InterProiIPR026249. GATS-like.
IPR027795. GATS-like_ACT_dom.
[Graphical view]
PfamiPF13840. ACT_7. 2 hits.
[Graphical view]
PRINTSiPR02078. GATSLIKEFMLY.
ProtoNetiSearch...

Publicationsi

  1. "The DNA sequence of human chromosome 7."
    Hillier L.W., Fulton R.S., Fulton L.A., Graves T.A., Pepin K.H., Wagner-McPherson C., Layman D., Maas J., Jaeger S., Walker R., Wylie K., Sekhon M., Becker M.C., O'Laughlin M.D., Schaller M.E., Fewell G.A., Delehaunty K.D., Miner T.L.
    , Nash W.E., Cordes M., Du H., Sun H., Edwards J., Bradshaw-Cordum H., Ali J., Andrews S., Isak A., Vanbrunt A., Nguyen C., Du F., Lamar B., Courtney L., Kalicki J., Ozersky P., Bielicki L., Scott K., Holmes A., Harkins R., Harris A., Strong C.M., Hou S., Tomlinson C., Dauphin-Kohlberg S., Kozlowicz-Reilly A., Leonard S., Rohlfing T., Rock S.M., Tin-Wollam A.-M., Abbott A., Minx P., Maupin R., Strowmatt C., Latreille P., Miller N., Johnson D., Murray J., Woessner J.P., Wendl M.C., Yang S.-P., Schultz B.R., Wallis J.W., Spieth J., Bieri T.A., Nelson J.O., Berkowicz N., Wohldmann P.E., Cook L.L., Hickenbotham M.T., Eldred J., Williams D., Bedell J.A., Mardis E.R., Clifton S.W., Chissoe S.L., Marra M.A., Raymond C., Haugen E., Gillett W., Zhou Y., James R., Phelps K., Iadanoto S., Bubb K., Simms E., Levy R., Clendenning J., Kaul R., Kent W.J., Furey T.S., Baertsch R.A., Brent M.R., Keibler E., Flicek P., Bork P., Suyama M., Bailey J.A., Portnoy M.E., Torrents D., Chinwalla A.T., Gish W.R., Eddy S.R., McPherson J.D., Olson M.V., Eichler E.E., Green E.D., Waterston R.H., Wilson R.K.
    Nature 424:157-164(2003) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
  2. "The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)."
    The MGC Project Team
    Genome Res. 14:2121-2127(2004) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].

Entry informationi

Entry nameiGATL2_HUMAN
AccessioniPrimary (citable) accession number: A6NHX0
Secondary accession number(s): A6NNH0, B9EJH9
Entry historyi
Integrated into UniProtKB/Swiss-Prot: June 10, 2008
Last sequence update: June 10, 2008
Last modified: April 13, 2016
This is version 63 of the entry and version 3 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program
DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Human chromosome 7
    Human chromosome 7: entries, gene names and cross-references to MIM
  2. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.