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Protein

Uncharacterized protein C17orf96

Gene

C17orf96

Organism
Homo sapiens (Human)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Experimental evidence at protein leveli

Functioni

GO - Biological processi

Complete GO annotation...

Names & Taxonomyi

Protein namesi
Recommended name:
Uncharacterized protein C17orf96
Gene namesi
OrganismiHomo sapiens (Human)
Taxonomic identifieri9606 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaeHomo
Proteomesi
  • UP000005640 Componenti: Chromosome 17

Organism-specific databases

HGNCiHGNC:34493. C17orf96.

Pathology & Biotechi

Organism-specific databases

PharmGKBiPA162378581.

Polymorphism and mutation databases

BioMutaiC17orf96.

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 379379Uncharacterized protein C17orf96PRO_0000332154Add
BLAST

Amino acid modifications

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Modified residuei15 – 151PhosphoserineCombined sources
Modified residuei19 – 191PhosphoserineCombined sources

Keywords - PTMi

Phosphoprotein

Proteomic databases

MaxQBiA6NHQ4.
PaxDbiA6NHQ4.
PeptideAtlasiA6NHQ4.
PRIDEiA6NHQ4.

PTM databases

iPTMnetiA6NHQ4.
PhosphoSiteiA6NHQ4.

Expressioni

Gene expression databases

BgeeiA6NHQ4.
CleanExiHS_C17orf96.
GenevisibleiA6NHQ4. HS.

Organism-specific databases

HPAiHPA056555.

Interactioni

Protein-protein interaction databases

BioGridi936860. 5 interactions.
IntActiA6NHQ4. 2 interactions.
STRINGi9606.ENSP00000317905.

Structurei

3D structure databases

ProteinModelPortaliA6NHQ4.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Compositional bias

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Compositional biasi6 – 367362Pro-richAdd
BLAST

Phylogenomic databases

eggNOGiENOG410II10. Eukaryota.
ENOG41116AE. LUCA.
GeneTreeiENSGT00530000064183.
HOGENOMiHOG000111944.
HOVERGENiHBG094969.
InParanoidiA6NHQ4.
OMAiFCALAKP.
OrthoDBiEOG7BZVS8.
PhylomeDBiA6NHQ4.
TreeFamiTF337589.

Family and domain databases

InterProiIPR027971. DUF4584.
[Graphical view]
PfamiPF15223. DUF4584. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

A6NHQ4-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
METLCPAPRL AVPASPRGSP CSPTPRKPCR GTQEFSPLCL RALAFCALAK
60 70 80 90 100
PRASSLGPGP GELAARSPVL RGPQAPLRPG GWAPDGLKHL WAPTGRPGVP
110 120 130 140 150
NTAAGEDADV AACPRRGEEE EGGGGFPHFG VRSCAPPGRC PAPPHPREST
160 170 180 190 200
TSFASAPPRP APGLEPQRGP AASPPQEPSS RPPSPPAGLS TEPAGPGTAP
210 220 230 240 250
RPFLPGQPAE VDGNPPPAAP EAPAASPSTA SPAPAAPGDL RQEHFDRLIR
260 270 280 290 300
RSKLWCYAKG FALDTPSLRR GPERPPAKGP ARGAAKKRRL PAPPPRTAQP
310 320 330 340 350
RRPAPTLPTT STFSLLNCFP CPPALVVGED GDLKPASSLR LQGDSKPPPA
360 370
HPLWRWQMGG PAVPEPPGLK FWGINMDES
Length:379
Mass (Da):39,322
Last modified:July 24, 2007 - v1
Checksum:iB79A849C86733102
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC006449 Genomic DNA. No translation available.
CH471152 Genomic DNA. Translation: EAW60520.1.
CCDSiCCDS45661.1.
RefSeqiNP_001124149.1. NM_001130677.1.
UniGeneiHs.445574.

Genome annotation databases

EnsembliENST00000613024; ENSP00000483859; ENSG00000277303.
ENST00000621654; ENSP00000484710; ENSG00000273604.
GeneIDi100170841.
KEGGihsa:100170841.
UCSCiuc010wdq.3. human.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC006449 Genomic DNA. No translation available.
CH471152 Genomic DNA. Translation: EAW60520.1.
CCDSiCCDS45661.1.
RefSeqiNP_001124149.1. NM_001130677.1.
UniGeneiHs.445574.

3D structure databases

ProteinModelPortaliA6NHQ4.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

BioGridi936860. 5 interactions.
IntActiA6NHQ4. 2 interactions.
STRINGi9606.ENSP00000317905.

PTM databases

iPTMnetiA6NHQ4.
PhosphoSiteiA6NHQ4.

Polymorphism and mutation databases

BioMutaiC17orf96.

Proteomic databases

MaxQBiA6NHQ4.
PaxDbiA6NHQ4.
PeptideAtlasiA6NHQ4.
PRIDEiA6NHQ4.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENST00000613024; ENSP00000483859; ENSG00000277303.
ENST00000621654; ENSP00000484710; ENSG00000273604.
GeneIDi100170841.
KEGGihsa:100170841.
UCSCiuc010wdq.3. human.

Organism-specific databases

CTDi100170841.
GeneCardsiC17orf96.
H-InvDBHIX0039237.
HGNCiHGNC:34493. C17orf96.
HPAiHPA056555.
neXtProtiNX_A6NHQ4.
PharmGKBiPA162378581.
GenAtlasiSearch...

Phylogenomic databases

eggNOGiENOG410II10. Eukaryota.
ENOG41116AE. LUCA.
GeneTreeiENSGT00530000064183.
HOGENOMiHOG000111944.
HOVERGENiHBG094969.
InParanoidiA6NHQ4.
OMAiFCALAKP.
OrthoDBiEOG7BZVS8.
PhylomeDBiA6NHQ4.
TreeFamiTF337589.

Miscellaneous databases

GenomeRNAii100170841.
PROiA6NHQ4.

Gene expression databases

BgeeiA6NHQ4.
CleanExiHS_C17orf96.
GenevisibleiA6NHQ4. HS.

Family and domain databases

InterProiIPR027971. DUF4584.
[Graphical view]
PfamiPF15223. DUF4584. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "DNA sequence of human chromosome 17 and analysis of rearrangement in the human lineage."
    Zody M.C., Garber M., Adams D.J., Sharpe T., Harrow J., Lupski J.R., Nicholson C., Searle S.M., Wilming L., Young S.K., Abouelleil A., Allen N.R., Bi W., Bloom T., Borowsky M.L., Bugalter B.E., Butler J., Chang J.L.
    , Chen C.-K., Cook A., Corum B., Cuomo C.A., de Jong P.J., DeCaprio D., Dewar K., FitzGerald M., Gilbert J., Gibson R., Gnerre S., Goldstein S., Grafham D.V., Grocock R., Hafez N., Hagopian D.S., Hart E., Norman C.H., Humphray S., Jaffe D.B., Jones M., Kamal M., Khodiyar V.K., LaButti K., Laird G., Lehoczky J., Liu X., Lokyitsang T., Loveland J., Lui A., Macdonald P., Major J.E., Matthews L., Mauceli E., McCarroll S.A., Mihalev A.H., Mudge J., Nguyen C., Nicol R., O'Leary S.B., Osoegawa K., Schwartz D.C., Shaw-Smith C., Stankiewicz P., Steward C., Swarbreck D., Venkataraman V., Whittaker C.A., Yang X., Zimmer A.R., Bradley A., Hubbard T., Birren B.W., Rogers J., Lander E.S., Nusbaum C.
    Nature 440:1045-1049(2006) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
  2. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
  3. Cited for: PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT SER-15 AND SER-19, IDENTIFICATION BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS].
    Tissue: Cervix carcinoma.

Entry informationi

Entry nameiCQ096_HUMAN
AccessioniPrimary (citable) accession number: A6NHQ4
Entry historyi
Integrated into UniProtKB/Swiss-Prot: April 29, 2008
Last sequence update: July 24, 2007
Last modified: July 6, 2016
This is version 70 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program
DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Human chromosome 17
    Human chromosome 17: entries, gene names and cross-references to MIM

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.