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A6NGZ8

- SMIM9_HUMAN

UniProt

A6NGZ8 - SMIM9_HUMAN

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Protein

Small integral membrane protein 9

Gene
SMIM9, CXorf68
Organism
Homo sapiens (Human)
Status
Reviewed - Annotation score: 2 out of 5 - Protein predictedi

Names & Taxonomyi

Protein namesi
Recommended name:
Small integral membrane protein 9
Gene namesi
Name:SMIM9
Synonyms:CXorf68
OrganismiHomo sapiens (Human)
Taxonomic identifieri9606 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaeHomo
ProteomesiUP000005640: Chromosome X

Organism-specific databases

HGNCiHGNC:41915. SMIM9.

Subcellular locationi

Topology

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Topological domaini27 – 7347Extracellular Reviewed predictionAdd
BLAST
Transmembranei74 – 9421Helical; Reviewed predictionAdd
BLAST
Topological domaini95 – 995Cytoplasmic Reviewed prediction

GO - Cellular componenti

  1. integral component of membrane Source: UniProtKB-KW
  2. plasma membrane Source: UniProtKB-SubCell
Complete GO annotation...

Keywords - Cellular componenti

Cell membrane, Membrane

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Signal peptidei1 – 2626 Reviewed predictionAdd
BLAST
Chaini27 – 9973Small integral membrane protein 9PRO_0000348247Add
BLAST

Proteomic databases

PaxDbiA6NGZ8.

Expressioni

Gene expression databases

BgeeiA6NGZ8.
GenevestigatoriA6NGZ8.

Organism-specific databases

HPAiHPA060970.

Structurei

3D structure databases

ProteinModelPortaliA6NGZ8.

Family & Domainsi

Keywords - Domaini

Signal, Transmembrane, Transmembrane helix

Phylogenomic databases

eggNOGiNOG115370.
HOGENOMiHOG000155728.
InParanoidiA6NGZ8.
OMAiMEPQKLL.
OrthoDBiEOG789CDT.
PhylomeDBiA6NGZ8.
TreeFamiTF354094.

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

A6NGZ8-1 [UniParc]FASTAAdd to Basket

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MEPQKLLIIG FLLCSLTCLL LETVASSPLP LSALGIQEKT GSKPRSGGNH   50
RSWLNNFRDY LWQLIKSALP PAAIVAFLLT SALMGILCCF TILVVDPVH 99
Length:99
Mass (Da):10,777
Last modified:July 24, 2007 - v1
Checksum:iF88330841E92B319
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AC109993 Genomic DNA. No translation available.
CH471172 Genomic DNA. Translation: EAW72652.1.
CCDSiCCDS55546.1.
RefSeqiNP_001156408.1. NM_001162936.1.
UniGeneiHs.220762.

Genome annotation databases

EnsembliENST00000369529; ENSP00000358542; ENSG00000203870.
ENST00000595111; ENSP00000469180; ENSG00000268084.
GeneIDi100132963.
KEGGihsa:100132963.
UCSCiuc022cik.1. human.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AC109993 Genomic DNA. No translation available.
CH471172 Genomic DNA. Translation: EAW72652.1 .
CCDSi CCDS55546.1.
RefSeqi NP_001156408.1. NM_001162936.1.
UniGenei Hs.220762.

3D structure databases

ProteinModelPortali A6NGZ8.
ModBasei Search...
MobiDBi Search...

Proteomic databases

PaxDbi A6NGZ8.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

Ensembli ENST00000369529 ; ENSP00000358542 ; ENSG00000203870 .
ENST00000595111 ; ENSP00000469180 ; ENSG00000268084 .
GeneIDi 100132963.
KEGGi hsa:100132963.
UCSCi uc022cik.1. human.

Organism-specific databases

CTDi 100132963.
GeneCardsi GC0XM154055.
HGNCi HGNC:41915. SMIM9.
HPAi HPA060970.
neXtProti NX_A6NGZ8.
GenAtlasi Search...

Phylogenomic databases

eggNOGi NOG115370.
HOGENOMi HOG000155728.
InParanoidi A6NGZ8.
OMAi MEPQKLL.
OrthoDBi EOG789CDT.
PhylomeDBi A6NGZ8.
TreeFami TF354094.

Miscellaneous databases

GenomeRNAii 100132963.
NextBioi 20789292.

Gene expression databases

Bgeei A6NGZ8.
Genevestigatori A6NGZ8.

Family and domain databases

ProtoNeti Search...

Publicationsi

  1. "The DNA sequence of the human X chromosome."
    Ross M.T., Grafham D.V., Coffey A.J., Scherer S., McLay K., Muzny D., Platzer M., Howell G.R., Burrows C., Bird C.P., Frankish A., Lovell F.L., Howe K.L., Ashurst J.L., Fulton R.S., Sudbrak R., Wen G., Jones M.C.
    , Hurles M.E., Andrews T.D., Scott C.E., Searle S., Ramser J., Whittaker A., Deadman R., Carter N.P., Hunt S.E., Chen R., Cree A., Gunaratne P., Havlak P., Hodgson A., Metzker M.L., Richards S., Scott G., Steffen D., Sodergren E., Wheeler D.A., Worley K.C., Ainscough R., Ambrose K.D., Ansari-Lari M.A., Aradhya S., Ashwell R.I., Babbage A.K., Bagguley C.L., Ballabio A., Banerjee R., Barker G.E., Barlow K.F., Barrett I.P., Bates K.N., Beare D.M., Beasley H., Beasley O., Beck A., Bethel G., Blechschmidt K., Brady N., Bray-Allen S., Bridgeman A.M., Brown A.J., Brown M.J., Bonnin D., Bruford E.A., Buhay C., Burch P., Burford D., Burgess J., Burrill W., Burton J., Bye J.M., Carder C., Carrel L., Chako J., Chapman J.C., Chavez D., Chen E., Chen G., Chen Y., Chen Z., Chinault C., Ciccodicola A., Clark S.Y., Clarke G., Clee C.M., Clegg S., Clerc-Blankenburg K., Clifford K., Cobley V., Cole C.G., Conquer J.S., Corby N., Connor R.E., David R., Davies J., Davis C., Davis J., Delgado O., Deshazo D., Dhami P., Ding Y., Dinh H., Dodsworth S., Draper H., Dugan-Rocha S., Dunham A., Dunn M., Durbin K.J., Dutta I., Eades T., Ellwood M., Emery-Cohen A., Errington H., Evans K.L., Faulkner L., Francis F., Frankland J., Fraser A.E., Galgoczy P., Gilbert J., Gill R., Gloeckner G., Gregory S.G., Gribble S., Griffiths C., Grocock R., Gu Y., Gwilliam R., Hamilton C., Hart E.A., Hawes A., Heath P.D., Heitmann K., Hennig S., Hernandez J., Hinzmann B., Ho S., Hoffs M., Howden P.J., Huckle E.J., Hume J., Hunt P.J., Hunt A.R., Isherwood J., Jacob L., Johnson D., Jones S., de Jong P.J., Joseph S.S., Keenan S., Kelly S., Kershaw J.K., Khan Z., Kioschis P., Klages S., Knights A.J., Kosiura A., Kovar-Smith C., Laird G.K., Langford C., Lawlor S., Leversha M., Lewis L., Liu W., Lloyd C., Lloyd D.M., Loulseged H., Loveland J.E., Lovell J.D., Lozado R., Lu J., Lyne R., Ma J., Maheshwari M., Matthews L.H., McDowall J., McLaren S., McMurray A., Meidl P., Meitinger T., Milne S., Miner G., Mistry S.L., Morgan M., Morris S., Mueller I., Mullikin J.C., Nguyen N., Nordsiek G., Nyakatura G., O'dell C.N., Okwuonu G., Palmer S., Pandian R., Parker D., Parrish J., Pasternak S., Patel D., Pearce A.V., Pearson D.M., Pelan S.E., Perez L., Porter K.M., Ramsey Y., Reichwald K., Rhodes S., Ridler K.A., Schlessinger D., Schueler M.G., Sehra H.K., Shaw-Smith C., Shen H., Sheridan E.M., Shownkeen R., Skuce C.D., Smith M.L., Sotheran E.C., Steingruber H.E., Steward C.A., Storey R., Swann R.M., Swarbreck D., Tabor P.E., Taudien S., Taylor T., Teague B., Thomas K., Thorpe A., Timms K., Tracey A., Trevanion S., Tromans A.C., d'Urso M., Verduzco D., Villasana D., Waldron L., Wall M., Wang Q., Warren J., Warry G.L., Wei X., West A., Whitehead S.L., Whiteley M.N., Wilkinson J.E., Willey D.L., Williams G., Williams L., Williamson A., Williamson H., Wilming L., Woodmansey R.L., Wray P.W., Yen J., Zhang J., Zhou J., Zoghbi H., Zorilla S., Buck D., Reinhardt R., Poustka A., Rosenthal A., Lehrach H., Meindl A., Minx P.J., Hillier L.W., Willard H.F., Wilson R.K., Waterston R.H., Rice C.M., Vaudin M., Coulson A., Nelson D.L., Weinstock G., Sulston J.E., Durbin R.M., Hubbard T., Gibbs R.A., Beck S., Rogers J., Bentley D.R.
    Nature 434:325-337(2005) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
  2. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Entry informationi

Entry nameiSMIM9_HUMAN
AccessioniPrimary (citable) accession number: A6NGZ8
Entry historyi
Integrated into UniProtKB/Swiss-Prot: September 2, 2008
Last sequence update: July 24, 2007
Last modified: July 9, 2014
This is version 52 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program
DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Human chromosome X
    Human chromosome X: entries, gene names and cross-references to MIM

External Data

Dasty 3

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