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A6NEF3

- GG6L4_HUMAN

UniProt

A6NEF3 - GG6L4_HUMAN

Protein

Putative golgin subfamily A member 6-like protein 4

Gene

GOLGA6L4

Organism
Homo sapiens (Human)
Status
Reviewed - Annotation score: 2 out of 5- Protein uncertaini
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    • History
      Entry version 40 (01 Oct 2014)
      Sequence version 3 (09 Jan 2013)
      Previous versions | rss
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    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Putative golgin subfamily A member 6-like protein 4
    Gene namesi
    OrganismiHomo sapiens (Human)
    Taxonomic identifieri9606 [NCBI]
    Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaeHomo
    ProteomesiUP000005640: Chromosome 15

    Organism-specific databases

    HGNCiHGNC:27256. GOLGA6L4.

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Chaini1 – 574574Putative golgin subfamily A member 6-like protein 4PRO_0000332264Add
    BLAST

    Proteomic databases

    PaxDbiA6NEF3.
    PRIDEiA6NEF3.

    Expressioni

    Gene expression databases

    BgeeiA6NEF3.
    GenevestigatoriA6NEF3.

    Structurei

    3D structure databases

    ProteinModelPortaliA6NEF3.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Coiled coil

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Coiled coili157 – 496340Sequence AnalysisAdd
    BLAST

    Sequence similaritiesi

    Belongs to the GOLGA6 family.Curated

    Keywords - Domaini

    Coiled coil

    Phylogenomic databases

    eggNOGiNOG144977.
    HOGENOMiHOG000218631.
    InParanoidiA6NEF3.
    PhylomeDBiA6NEF3.

    Family and domain databases

    InterProiIPR026737. GOLGA6L.
    [Graphical view]
    PANTHERiPTHR23143. PTHR23143. 1 hit.

    Sequencei

    Sequence statusi: Complete.

    A6NEF3-1 [UniParc]FASTAAdd to Basket

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    MWPQPRFPPH PAMSEKTQQG KLAAAKKKLK AYWQRKSPGI PAGANRKKKI    50
    NGSSPDTATS GGYHSPGDSA TGIYGEGRAS STTLEDLESQ YQELAVALDS 100
    SSAIISQLTE NINSLVRTSK EEKKHEIHLV QKLGRSLFKL KNQTAEPLAP 150
    EPPAGPSKVE QLQDETNHLR KELESVGRQL QAEVENNQML SLLNRRQEER 200
    LREQEERLRE QEERLREQED RLHEQEERLR EQEERLCEQE ERLREHEERL 250
    CEQEERLCEQ EERLREQEER LHEQEERLRE QEERLCEQEE RLREQEERLC 300
    EQEERLREQE ERLCEQEKLP GQERLLEEVE KLLEQERRQE EQERLLERER 350
    LLEEVEKLLE QERQQEEQER LLERERLLEE VEKLLEQERR QEEQERLLER 400
    ERLLDEVEEL LDEVEELLEQ ERLRQQDERL WQQETLQELE RLRELERLRE 450
    LERMLELGWE ALYEQRAEPR SGFEELNNEN KSTLQLEQQV KELKKSGGAE 500
    EPRGSESAAA ARPVAGAPVP QGAWMCGQAG WTPQEHPGLS GEAVGTGEAA 550
    GGAGEAACHS FRAAENRELN ITII 574
    Length:574
    Mass (Da):67,563
    Last modified:January 9, 2013 - v3
    Checksum:i1B501FFBE38A1020
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AC136698 Genomic DNA. No translation available.
    RefSeqiNP_001254465.2. NM_001267536.2.
    UniGeneiHs.498345.
    Hs.534573.
    Hs.742301.

    Genome annotation databases

    EnsembliENST00000510439; ENSP00000421586; ENSG00000184206.
    GeneIDi643707.
    KEGGihsa:643707.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AC136698 Genomic DNA. No translation available.
    RefSeqi NP_001254465.2. NM_001267536.2.
    UniGenei Hs.498345.
    Hs.534573.
    Hs.742301.

    3D structure databases

    ProteinModelPortali A6NEF3.
    ModBasei Search...
    MobiDBi Search...

    Proteomic databases

    PaxDbi A6NEF3.
    PRIDEi A6NEF3.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    Ensembli ENST00000510439 ; ENSP00000421586 ; ENSG00000184206 .
    GeneIDi 643707.
    KEGGi hsa:643707.

    Organism-specific databases

    GeneCardsi GC15P084912.
    HGNCi HGNC:27256. GOLGA6L4.
    neXtProti NX_A6NEF3.
    GenAtlasi Search...

    Phylogenomic databases

    eggNOGi NOG144977.
    HOGENOMi HOG000218631.
    InParanoidi A6NEF3.
    PhylomeDBi A6NEF3.

    Miscellaneous databases

    NextBioi 35494330.

    Gene expression databases

    Bgeei A6NEF3.
    Genevestigatori A6NEF3.

    Family and domain databases

    InterProi IPR026737. GOLGA6L.
    [Graphical view ]
    PANTHERi PTHR23143. PTHR23143. 1 hit.
    ProtoNeti Search...

    Publicationsi

    1. "Analysis of the DNA sequence and duplication history of human chromosome 15."
      Zody M.C., Garber M., Sharpe T., Young S.K., Rowen L., O'Neill K., Whittaker C.A., Kamal M., Chang J.L., Cuomo C.A., Dewar K., FitzGerald M.G., Kodira C.D., Madan A., Qin S., Yang X., Abbasi N., Abouelleil A.
      , Arachchi H.M., Baradarani L., Birditt B., Bloom S., Bloom T., Borowsky M.L., Burke J., Butler J., Cook A., DeArellano K., DeCaprio D., Dorris L. III, Dors M., Eichler E.E., Engels R., Fahey J., Fleetwood P., Friedman C., Gearin G., Hall J.L., Hensley G., Johnson E., Jones C., Kamat A., Kaur A., Locke D.P., Madan A., Munson G., Jaffe D.B., Lui A., Macdonald P., Mauceli E., Naylor J.W., Nesbitt R., Nicol R., O'Leary S.B., Ratcliffe A., Rounsley S., She X., Sneddon K.M.B., Stewart S., Sougnez C., Stone S.M., Topham K., Vincent D., Wang S., Zimmer A.R., Birren B.W., Hood L., Lander E.S., Nusbaum C.
      Nature 440:671-675(2006) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

    Entry informationi

    Entry nameiGG6L4_HUMAN
    AccessioniPrimary (citable) accession number: A6NEF3
    Secondary accession number(s): D6REZ9
    Entry historyi
    Integrated into UniProtKB/Swiss-Prot: April 29, 2008
    Last sequence update: January 9, 2013
    Last modified: October 1, 2014
    This is version 40 of the entry and version 3 of the sequence. [Complete history]
    Entry statusiReviewed (UniProtKB/Swiss-Prot)
    Annotation programChordata Protein Annotation Program
    DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.

    Miscellaneousi

    Caution

    Could be the product of a pseudogene.Curated

    Keywords - Technical termi

    Complete proteome, Reference proteome

    Documents

    1. Human chromosome 15
      Human chromosome 15: entries, gene names and cross-references to MIM
    2. SIMILARITY comments
      Index of protein domains and families

    External Data

    Dasty 3