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A6NEF3

- GG6L4_HUMAN

UniProt

A6NEF3 - GG6L4_HUMAN

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Protein

Putative golgin subfamily A member 6-like protein 4

Gene

GOLGA6L4

Organism
Homo sapiens (Human)
Status
Reviewed - Annotation score: 2 out of 5- Protein uncertaini

Names & Taxonomyi

Protein namesi
Recommended name:
Putative golgin subfamily A member 6-like protein 4
Gene namesi
OrganismiHomo sapiens (Human)
Taxonomic identifieri9606 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaeHomo
ProteomesiUP000005640: Chromosome 15

Organism-specific databases

HGNCiHGNC:27256. GOLGA6L4.

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 574574Putative golgin subfamily A member 6-like protein 4PRO_0000332264Add
BLAST

Proteomic databases

PaxDbiA6NEF3.
PRIDEiA6NEF3.

Expressioni

Gene expression databases

BgeeiA6NEF3.
ExpressionAtlasiA6NEF3. baseline.
GenevestigatoriA6NEF3.

Structurei

3D structure databases

ProteinModelPortaliA6NEF3.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Coiled coil

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Coiled coili157 – 496340Sequence AnalysisAdd
BLAST

Sequence similaritiesi

Belongs to the GOLGA6 family.Curated

Keywords - Domaini

Coiled coil

Phylogenomic databases

eggNOGiNOG144977.
GeneTreeiENSGT00530000062932.
HOGENOMiHOG000218631.
InParanoidiA6NEF3.
PhylomeDBiA6NEF3.

Family and domain databases

InterProiIPR026737. GOLGA6L.
[Graphical view]
PANTHERiPTHR23143. PTHR23143. 1 hit.

Sequencei

Sequence statusi: Complete.

A6NEF3-1 [UniParc]FASTAAdd to Basket

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        10         20         30         40         50
MWPQPRFPPH PAMSEKTQQG KLAAAKKKLK AYWQRKSPGI PAGANRKKKI
60 70 80 90 100
NGSSPDTATS GGYHSPGDSA TGIYGEGRAS STTLEDLESQ YQELAVALDS
110 120 130 140 150
SSAIISQLTE NINSLVRTSK EEKKHEIHLV QKLGRSLFKL KNQTAEPLAP
160 170 180 190 200
EPPAGPSKVE QLQDETNHLR KELESVGRQL QAEVENNQML SLLNRRQEER
210 220 230 240 250
LREQEERLRE QEERLREQED RLHEQEERLR EQEERLCEQE ERLREHEERL
260 270 280 290 300
CEQEERLCEQ EERLREQEER LHEQEERLRE QEERLCEQEE RLREQEERLC
310 320 330 340 350
EQEERLREQE ERLCEQEKLP GQERLLEEVE KLLEQERRQE EQERLLERER
360 370 380 390 400
LLEEVEKLLE QERQQEEQER LLERERLLEE VEKLLEQERR QEEQERLLER
410 420 430 440 450
ERLLDEVEEL LDEVEELLEQ ERLRQQDERL WQQETLQELE RLRELERLRE
460 470 480 490 500
LERMLELGWE ALYEQRAEPR SGFEELNNEN KSTLQLEQQV KELKKSGGAE
510 520 530 540 550
EPRGSESAAA ARPVAGAPVP QGAWMCGQAG WTPQEHPGLS GEAVGTGEAA
560 570
GGAGEAACHS FRAAENRELN ITII
Length:574
Mass (Da):67,563
Last modified:January 9, 2013 - v3
Checksum:i1B501FFBE38A1020
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC136698 Genomic DNA. No translation available.
CCDSiCCDS73774.1.
RefSeqiNP_001254465.2. NM_001267536.2.
UniGeneiHs.498345.
Hs.534573.
Hs.742301.

Genome annotation databases

EnsembliENST00000510439; ENSP00000421586; ENSG00000184206.
GeneIDi643707.
KEGGihsa:643707.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC136698 Genomic DNA. No translation available.
CCDSi CCDS73774.1.
RefSeqi NP_001254465.2. NM_001267536.2.
UniGenei Hs.498345.
Hs.534573.
Hs.742301.

3D structure databases

ProteinModelPortali A6NEF3.
ModBasei Search...
MobiDBi Search...

Proteomic databases

PaxDbi A6NEF3.
PRIDEi A6NEF3.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

Ensembli ENST00000510439 ; ENSP00000421586 ; ENSG00000184206 .
GeneIDi 643707.
KEGGi hsa:643707.

Organism-specific databases

CTDi 643707.
GeneCardsi GC15P084912.
HGNCi HGNC:27256. GOLGA6L4.
neXtProti NX_A6NEF3.
GenAtlasi Search...

Phylogenomic databases

eggNOGi NOG144977.
GeneTreei ENSGT00530000062932.
HOGENOMi HOG000218631.
InParanoidi A6NEF3.
PhylomeDBi A6NEF3.

Miscellaneous databases

GenomeRNAii 643707.
NextBioi 35494330.

Gene expression databases

Bgeei A6NEF3.
ExpressionAtlasi A6NEF3. baseline.
Genevestigatori A6NEF3.

Family and domain databases

InterProi IPR026737. GOLGA6L.
[Graphical view ]
PANTHERi PTHR23143. PTHR23143. 1 hit.
ProtoNeti Search...

Publicationsi

  1. "Analysis of the DNA sequence and duplication history of human chromosome 15."
    Zody M.C., Garber M., Sharpe T., Young S.K., Rowen L., O'Neill K., Whittaker C.A., Kamal M., Chang J.L., Cuomo C.A., Dewar K., FitzGerald M.G., Kodira C.D., Madan A., Qin S., Yang X., Abbasi N., Abouelleil A.
    , Arachchi H.M., Baradarani L., Birditt B., Bloom S., Bloom T., Borowsky M.L., Burke J., Butler J., Cook A., DeArellano K., DeCaprio D., Dorris L. III, Dors M., Eichler E.E., Engels R., Fahey J., Fleetwood P., Friedman C., Gearin G., Hall J.L., Hensley G., Johnson E., Jones C., Kamat A., Kaur A., Locke D.P., Madan A., Munson G., Jaffe D.B., Lui A., Macdonald P., Mauceli E., Naylor J.W., Nesbitt R., Nicol R., O'Leary S.B., Ratcliffe A., Rounsley S., She X., Sneddon K.M.B., Stewart S., Sougnez C., Stone S.M., Topham K., Vincent D., Wang S., Zimmer A.R., Birren B.W., Hood L., Lander E.S., Nusbaum C.
    Nature 440:671-675(2006) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Entry informationi

Entry nameiGG6L4_HUMAN
AccessioniPrimary (citable) accession number: A6NEF3
Secondary accession number(s): D6REZ9
Entry historyi
Integrated into UniProtKB/Swiss-Prot: April 29, 2008
Last sequence update: January 9, 2013
Last modified: November 26, 2014
This is version 42 of the entry and version 3 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program
DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.

Miscellaneousi

Caution

Could be the product of a pseudogene.Curated

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Human chromosome 15
    Human chromosome 15: entries, gene names and cross-references to MIM
  2. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3