A6NDK9 (GOG6C_HUMAN) Reviewed, UniProtKB/Swiss-Prot

Names and origin

Protein names

Recommended name:
Putative golgin subfamily A member 6C

Gene names

Name:

GOLGA6C

Organism

Homo sapiens (Human) [Reference proteome]

Taxonomic identifier

9606 [NCBI]

Taxonomic lineage

cellular organisms › Eukaryota › Opisthokonta › Metazoa › Eumetazoa › Bilateria › Deuterostomia › Chordata › Craniata › Vertebrata › Gnathostomata › Teleostomi › Euteleostomi › Sarcopterygii › Tetrapoda › Amniota › Mammalia › Theria › Eutheria › Euarchontoglires › Primates › Haplorrhini › Simiiformes › Catarrhini › Hominoidea › Hominidae › Homininae › Homo

Protein attributes

Sequence length	693 AA.
Sequence status	Complete.
Protein existence	Uncertain

General annotation (Comments)

Sequence similarities	Belongs to the GOLGA6 family.
Caution	Could be the product of a pseudogene. Maps to a duplicated region on chromosome 15; the gene is present in at least 4 almost identical copies.

Ontologies

Keywords
Domain	Coiled coil
Technical term	Complete proteome Reference proteome
Gene Ontology (GO)
Cellular_component	Golgi apparatus Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Molecule processing
	Chain	1 – 693	693	Putative golgin subfamily A member 6C		PRO_0000332249
Regions
	Coiled coil	73 – 611	539	Potential

Sequences

	Sequence		Length	Mass (Da)
	A6NDK9 [UniParc]. Last modified July 24, 2007. Version 1. Checksum: BEA09FD2D471FB8D	FASTA	693	79,884
	10 20 30 40 50 60 MWPQPYLPPH PMMLEESRQN KLAAAKKKLK EYQQRKSPGI PAGAKTKKKK TDSSPETTTS 70 80 90 100 110 120 GGGHSPGDSQ YQELAVALES SSVTINQLNE NIESLKQQKK QVEHQLEEAK KTNNEIHKAQ 130 140 150 160 170 180 MEQLETINIL TLEKADLKTT LYHTKRAARH FEEESKDLAG RLQYSLQRIQ ELERALSAVS 190 200 210 220 230 240 TQQQEEDRSS SCREAVLQRR LQQTIKERAL LNAHVTQVTE SLKQVQLERD EYAKHIKGER 250 260 270 280 290 300 ARWQERMWKM SVEARTLKEE KKRDIHRIQE LERSLSELKN QMAEPPSLAP PAVTSVVEQL 310 320 330 340 350 360 QDEAKHLRQE VEGLEGKLQS QVENNQALSL LSKEQKQRLQ EQEEMLREQE AQRVREQERL 370 380 390 400 410 420 CEQNERLREQ QKTLQEQGER LRKQEQRLRK QEERLRKEEE RLQKQEKRLW DQEERLWKKE 430 440 450 460 470 480 ERLQKQEERL ALSQNHKLDK QLAEPQCSFE DLNNEKKSAL QLEQQVKELQ EKLDEEHLEA 490 500 510 520 530 540 ASQRNQQLET QLSLVALPGE GDGGQHLDSE EEEAPRPTPN IPEDLESREA TSSFMDLPKE 550 560 570 580 590 600 KADGTEQVER RELGFVQPSG VTDGMRESFT VYESQGAVPN TRHQEMEDVI RLAQKEEEMK 610 620 630 640 650 660 VKLLELQELV LPLVGNHEGH GKFLIAAQNP ADEPTPGAPA PQELGAAGEQ DDFYEVSLDN 670 680 690 NVEPAPGAAR EGSPHDNPPV QQIVQLSPVM QDT

References

[1]

"Analysis of the DNA sequence and duplication history of human chromosome 15." Zody M.C., Garber M., Sharpe T., Young S.K., Rowen L., O'Neill K., Whittaker C.A., Kamal M., Chang J.L., Cuomo C.A., Dewar K., FitzGerald M.G., Kodira C.D., Madan A., Qin S., Yang X., Abbasi N., Abouelleil A. , Arachchi H.M., Baradarani L., Birditt B., Bloom S., Bloom T., Borowsky M.L., Burke J., Butler J., Cook A., DeArellano K., DeCaprio D., Dorris L. III, Dors M., Eichler E.E., Engels R., Fahey J., Fleetwood P., Friedman C., Gearin G., Hall J.L., Hensley G., Johnson E., Jones C., Kamat A., Kaur A., Locke D.P., Madan A., Munson G., Jaffe D.B., Lui A., Macdonald P., Mauceli E., Naylor J.W., Nesbitt R., Nicol R., O'Leary S.B., Ratcliffe A., Rounsley S., She X., Sneddon K.M.B., Stewart S., Sougnez C., Stone S.M., Topham K., Vincent D., Wang S., Zimmer A.R., Birren B.W., Hood L., Lander E.S., Nusbaum C. Nature 440:671-675(2006) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases
EMBL GenBank DDBJ	AC068338 Genomic DNA. No translation available.
IPI	IPI00455256.
RefSeq	NP_001157876.1. NM_001164404.1.
UniGene	Hs.540230.
3D structure databases
ProteinModelPortal	A6NDK9.
ModBase	Search...
PTM databases
PhosphoSite	A6NDK9.
Proteomic databases
PRIDE	A6NDK9.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
Ensembl	ENST00000300576; ENSP00000300576; ENSG00000167195.
GeneID	653641.
KEGG	hsa:653641.
UCSC	uc002azs.2. human.
Organism-specific databases
CTD	653641.
GeneCards	GC15P075550.
HGNC	HGNC:32206. GOLGA6C.
HPA	HPA044978.
neXtProt	NX_A6NDK9.
PharmGKB	PA162389919.
GenAtlas	Search...
Phylogenomic databases
HOGENOM	HOG000218631.
HOVERGEN	HBG051752.
InParanoid	A6NDK9.
OMA	GEMEDEP.
OrthoDB	EOG4F1X2V.
PhylomeDB	A6NDK9.
Gene expression databases
Bgee	A6NDK9.
CleanEx	HS_GOLGA6C.
Genevestigator	A6NDK9.
Family and domain databases
InterPro	IPR024858. Golgin_A. [Graphical view]
PANTHER	PTHR10881. PTHR10881. 1 hit.
ProtoNet	Search...
Other
GenomeRNAi	653641.
NextBio	123498.

Entry information

Entry name

GOG6C_HUMAN

Accession

Primary (citable) accession number: A6NDK9

Entry history

Integrated into UniProtKB/Swiss-Prot:	April 29, 2008
Last sequence update:	July 24, 2007
Last modified:	April 3, 2013
This is version 47 of the entry and version 1 of the sequence. [Complete history]

Entry status

Reviewed (UniProtKB/Swiss-Prot)

Annotation program

Chordata Protein Annotation Program

Disclaimer

Any medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.