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A6NDK9

- GOG6C_HUMAN

UniProt

A6NDK9 - GOG6C_HUMAN

Protein

Putative golgin subfamily A member 6C

Gene

GOLGA6C

Organism
Homo sapiens (Human)
Status
Reviewed - Annotation score: 2 out of 5- Protein uncertaini
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    • History
      Entry version 54 (01 Oct 2014)
      Sequence version 1 (24 Jul 2007)
      Previous versions | rss
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    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Putative golgin subfamily A member 6C
    Gene namesi
    Name:GOLGA6C
    OrganismiHomo sapiens (Human)
    Taxonomic identifieri9606 [NCBI]
    Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaeHomo
    ProteomesiUP000005640: Chromosome 15

    Organism-specific databases

    HGNCiHGNC:32206. GOLGA6C.

    Subcellular locationi

    GO - Cellular componenti

    1. Golgi apparatus Source: InterPro

    Pathology & Biotechi

    Organism-specific databases

    PharmGKBiPA162389919.

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Chaini1 – 693693Putative golgin subfamily A member 6CPRO_0000332249Add
    BLAST

    Proteomic databases

    PRIDEiA6NDK9.

    PTM databases

    PhosphoSiteiA6NDK9.

    Expressioni

    Gene expression databases

    BgeeiA6NDK9.
    CleanExiHS_GOLGA6C.
    GenevestigatoriA6NDK9.

    Organism-specific databases

    HPAiHPA044978.
    HPA050087.

    Structurei

    3D structure databases

    ProteinModelPortaliA6NDK9.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Coiled coil

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Coiled coili73 – 611539Sequence AnalysisAdd
    BLAST

    Sequence similaritiesi

    Belongs to the GOLGA6 family.Curated

    Keywords - Domaini

    Coiled coil

    Phylogenomic databases

    HOGENOMiHOG000218631.
    HOVERGENiHBG051752.
    InParanoidiA6NDK9.
    OMAiLQIFIHH.
    OrthoDBiEOG71P29T.
    PhylomeDBiA6NDK9.
    TreeFamiTF316990.

    Family and domain databases

    InterProiIPR024858. Golgin_A.
    [Graphical view]
    PANTHERiPTHR10881. PTHR10881. 1 hit.

    Sequencei

    Sequence statusi: Complete.

    A6NDK9-1 [UniParc]FASTAAdd to Basket

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    MWPQPYLPPH PMMLEESRQN KLAAAKKKLK EYQQRKSPGI PAGAKTKKKK    50
    TDSSPETTTS GGGHSPGDSQ YQELAVALES SSVTINQLNE NIESLKQQKK 100
    QVEHQLEEAK KTNNEIHKAQ MEQLETINIL TLEKADLKTT LYHTKRAARH 150
    FEEESKDLAG RLQYSLQRIQ ELERALSAVS TQQQEEDRSS SCREAVLQRR 200
    LQQTIKERAL LNAHVTQVTE SLKQVQLERD EYAKHIKGER ARWQERMWKM 250
    SVEARTLKEE KKRDIHRIQE LERSLSELKN QMAEPPSLAP PAVTSVVEQL 300
    QDEAKHLRQE VEGLEGKLQS QVENNQALSL LSKEQKQRLQ EQEEMLREQE 350
    AQRVREQERL CEQNERLREQ QKTLQEQGER LRKQEQRLRK QEERLRKEEE 400
    RLQKQEKRLW DQEERLWKKE ERLQKQEERL ALSQNHKLDK QLAEPQCSFE 450
    DLNNEKKSAL QLEQQVKELQ EKLDEEHLEA ASQRNQQLET QLSLVALPGE 500
    GDGGQHLDSE EEEAPRPTPN IPEDLESREA TSSFMDLPKE KADGTEQVER 550
    RELGFVQPSG VTDGMRESFT VYESQGAVPN TRHQEMEDVI RLAQKEEEMK 600
    VKLLELQELV LPLVGNHEGH GKFLIAAQNP ADEPTPGAPA PQELGAAGEQ 650
    DDFYEVSLDN NVEPAPGAAR EGSPHDNPPV QQIVQLSPVM QDT 693
    Length:693
    Mass (Da):79,884
    Last modified:July 24, 2007 - v1
    Checksum:iBEA09FD2D471FB8D
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AC068338 Genomic DNA. No translation available.
    CCDSiCCDS58388.1.
    RefSeqiNP_001157876.1. NM_001164404.1.
    UniGeneiHs.540230.

    Genome annotation databases

    EnsembliENST00000300576; ENSP00000300576; ENSG00000167195.
    GeneIDi653641.
    KEGGihsa:653641.
    UCSCiuc002azs.2. human.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AC068338 Genomic DNA. No translation available.
    CCDSi CCDS58388.1.
    RefSeqi NP_001157876.1. NM_001164404.1.
    UniGenei Hs.540230.

    3D structure databases

    ProteinModelPortali A6NDK9.
    ModBasei Search...
    MobiDBi Search...

    PTM databases

    PhosphoSitei A6NDK9.

    Proteomic databases

    PRIDEi A6NDK9.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    Ensembli ENST00000300576 ; ENSP00000300576 ; ENSG00000167195 .
    GeneIDi 653641.
    KEGGi hsa:653641.
    UCSCi uc002azs.2. human.

    Organism-specific databases

    CTDi 653641.
    GeneCardsi GC15P075550.
    HGNCi HGNC:32206. GOLGA6C.
    HPAi HPA044978.
    HPA050087.
    neXtProti NX_A6NDK9.
    PharmGKBi PA162389919.
    GenAtlasi Search...

    Phylogenomic databases

    HOGENOMi HOG000218631.
    HOVERGENi HBG051752.
    InParanoidi A6NDK9.
    OMAi LQIFIHH.
    OrthoDBi EOG71P29T.
    PhylomeDBi A6NDK9.
    TreeFami TF316990.

    Miscellaneous databases

    GenomeRNAii 653641.
    NextBioi 123498.

    Gene expression databases

    Bgeei A6NDK9.
    CleanExi HS_GOLGA6C.
    Genevestigatori A6NDK9.

    Family and domain databases

    InterProi IPR024858. Golgin_A.
    [Graphical view ]
    PANTHERi PTHR10881. PTHR10881. 1 hit.
    ProtoNeti Search...

    Publicationsi

    1. "Analysis of the DNA sequence and duplication history of human chromosome 15."
      Zody M.C., Garber M., Sharpe T., Young S.K., Rowen L., O'Neill K., Whittaker C.A., Kamal M., Chang J.L., Cuomo C.A., Dewar K., FitzGerald M.G., Kodira C.D., Madan A., Qin S., Yang X., Abbasi N., Abouelleil A.
      , Arachchi H.M., Baradarani L., Birditt B., Bloom S., Bloom T., Borowsky M.L., Burke J., Butler J., Cook A., DeArellano K., DeCaprio D., Dorris L. III, Dors M., Eichler E.E., Engels R., Fahey J., Fleetwood P., Friedman C., Gearin G., Hall J.L., Hensley G., Johnson E., Jones C., Kamat A., Kaur A., Locke D.P., Madan A., Munson G., Jaffe D.B., Lui A., Macdonald P., Mauceli E., Naylor J.W., Nesbitt R., Nicol R., O'Leary S.B., Ratcliffe A., Rounsley S., She X., Sneddon K.M.B., Stewart S., Sougnez C., Stone S.M., Topham K., Vincent D., Wang S., Zimmer A.R., Birren B.W., Hood L., Lander E.S., Nusbaum C.
      Nature 440:671-675(2006) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

    Entry informationi

    Entry nameiGOG6C_HUMAN
    AccessioniPrimary (citable) accession number: A6NDK9
    Entry historyi
    Integrated into UniProtKB/Swiss-Prot: April 29, 2008
    Last sequence update: July 24, 2007
    Last modified: October 1, 2014
    This is version 54 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiReviewed (UniProtKB/Swiss-Prot)
    Annotation programChordata Protein Annotation Program
    DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.

    Miscellaneousi

    Caution

    Could be the product of a pseudogene. Maps to a duplicated region on chromosome 15; the gene is present in at least 4 almost identical copies.Curated

    Keywords - Technical termi

    Complete proteome, Reference proteome

    Documents

    1. Human chromosome 15
      Human chromosome 15: entries, gene names and cross-references to MIM
    2. SIMILARITY comments
      Index of protein domains and families

    External Data

    Dasty 3