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Protein

Ubiquitin carboxyl-terminal hydrolase 17-like protein 3

Gene

USP17L3

Organism
Homo sapiens (Human)
Status
Reviewed-Annotation score: Annotation score: 3 out of 5-Protein inferred from homologyi

Functioni

Deubiquitinating enzyme that removes conjugated ubiquitin from specific proteins to regulate different cellular processes that may include cell proliferation, progression through the cell cycle, apoptosis, cell migration, and the cellular response to viral infection.By similarity

Catalytic activityi

Thiol-dependent hydrolysis of ester, thioester, amide, peptide and isopeptide bonds formed by the C-terminal Gly of ubiquitin (a 76-residue protein attached to proteins as an intracellular targeting signal).

Sites

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Active sitei89NucleophilePROSITE-ProRule annotation1
Active sitei334Proton acceptorPROSITE-ProRule annotation1

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionHydrolase, Protease, Thiol protease
Biological processApoptosis, Ubl conjugation pathway

Enzyme and pathway databases

ReactomeiR-HSA-5689880. Ub-specific processing proteases.

Names & Taxonomyi

Protein namesi
Recommended name:
Ubiquitin carboxyl-terminal hydrolase 17-like protein 3 (EC:3.4.19.12)
Alternative name(s):
Deubiquitinating enzyme 17-like protein 3
Ubiquitin thioesterase 17-like protein 3
Ubiquitin-specific-processing protease 17-like protein 3
Gene namesi
Name:USP17L3
Synonyms:USP17B, USP17F
OrganismiHomo sapiens (Human)
Taxonomic identifieri9606 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaeHomo
Proteomesi
  • UP000005640 Componenti: Chromosome 8

Organism-specific databases

HGNCiHGNC:37175. USP17L3.

Subcellular locationi

GO - Cellular componenti

Keywords - Cellular componenti

Endoplasmic reticulum, Nucleus

Pathology & Biotechi

Polymorphism and mutation databases

BioMutaiUSP17L3.

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00003316451 – 530Ubiquitin carboxyl-terminal hydrolase 17-like protein 3Add BLAST530

Proteomic databases

EPDiA6NCW0.
PaxDbiA6NCW0.
PRIDEiA6NCW0.

PTM databases

iPTMnetiA6NCW0.
PhosphoSitePlusiA6NCW0.

Expressioni

Organism-specific databases

HPAiHPA045642.

Interactioni

Protein-protein interaction databases

STRINGi9606.ENSP00000333329.

Structurei

3D structure databases

ProteinModelPortaliA6NCW0.
SMRiA6NCW0.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini80 – 375USPAdd BLAST296

Sequence similaritiesi

Belongs to the peptidase C19 family. USP17 subfamily.Curated

Phylogenomic databases

eggNOGiKOG1865. Eukaryota.
ENOG410XQ92. LUCA.
GeneTreeiENSGT00880000139114.
HOGENOMiHOG000144638.
HOVERGENiHBG007129.
InParanoidiA6NCW0.
OrthoDBiEOG091G06D5.
PhylomeDBiA6NCW0.

Family and domain databases

InterProiView protein in InterPro
IPR001394. Peptidase_C19_UCH.
IPR018200. USP_CS.
IPR028889. USP_dom.
PfamiView protein in Pfam
PF00443. UCH. 1 hit.
PROSITEiView protein in PROSITE
PS00973. USP_2. 1 hit.
PS50235. USP_3. 1 hit.

Sequencei

Sequence statusi: Complete.

A6NCW0-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MGDDSLYLGG EWQFNHFSKL TSSRPDAAFA EIQRTSLPEK SPLSSETRVD
60 70 80 90 100
LCDDLAPVAR QLAPREKLPL SSRRPAAVGA GLQNMGNTCY ENASLQCLTY
110 120 130 140 150
TLPLANYMLS REHSQTCQRP KCCMLCTMQA HITWALHSPG HVIQPSQALA
160 170 180 190 200
SGFHRGKQED VHEFLMFTVD AMKKACLPGH KQVDHHSKDT TLIHQIFGGC
210 220 230 240 250
WRSQIKCLHC HGISDTFDPY LDIALDIQAA QSVKQALEQL VKPEELNGEN
260 270 280 290 300
AYHCGLCLQR APASNTLTLH TSAKVLILVL KRFSDVAGNK LAKNVQYPEC
310 320 330 340 350
LDMQPYMSQQ NTGPLVYVLY AVLVHAGWSC HDGHYFSYVK AQEGQWYKMD
360 370 380 390 400
DAEVTVCSIT SVLSQQAYVL FYIQKSEWER HSESVSRGRE PRALGAEDTD
410 420 430 440 450
RRAKQGELKR DHPCLQAPEL DEHLVERATQ ESTLDHWKFL QEQNKTKPEF
460 470 480 490 500
NVGKVEGTLP PNALVIHQSK YKCGMKNHHP EQQSSLLNLS STTRTDQESM
510 520 530
NTGTLASLQG RTRRAKGKNK HSKRALLVCQ
Length:530
Mass (Da):59,536
Last modified:July 24, 2007 - v1
Checksum:iE7452B190523A0F3
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC130365 Genomic DNA. No translation available.
CCDSiCCDS78301.1.
RefSeqiNP_001243800.1. NM_001256871.1.
UniGeneiHs.741131.

Genome annotation databases

EnsembliENST00000530484; ENSP00000485323; ENSG00000225327.
GeneIDi645836.
KEGGihsa:645836.
UCSCiuc031taf.1. human.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC130365 Genomic DNA. No translation available.
CCDSiCCDS78301.1.
RefSeqiNP_001243800.1. NM_001256871.1.
UniGeneiHs.741131.

3D structure databases

ProteinModelPortaliA6NCW0.
SMRiA6NCW0.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi9606.ENSP00000333329.

PTM databases

iPTMnetiA6NCW0.
PhosphoSitePlusiA6NCW0.

Polymorphism and mutation databases

BioMutaiUSP17L3.

Proteomic databases

EPDiA6NCW0.
PaxDbiA6NCW0.
PRIDEiA6NCW0.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENST00000530484; ENSP00000485323; ENSG00000225327.
GeneIDi645836.
KEGGihsa:645836.
UCSCiuc031taf.1. human.

Organism-specific databases

CTDi645836.
GeneCardsiUSP17L3.
HGNCiHGNC:37175. USP17L3.
HPAiHPA045642.
neXtProtiNX_A6NCW0.
GenAtlasiSearch...

Phylogenomic databases

eggNOGiKOG1865. Eukaryota.
ENOG410XQ92. LUCA.
GeneTreeiENSGT00880000139114.
HOGENOMiHOG000144638.
HOVERGENiHBG007129.
InParanoidiA6NCW0.
OrthoDBiEOG091G06D5.
PhylomeDBiA6NCW0.

Enzyme and pathway databases

ReactomeiR-HSA-5689880. Ub-specific processing proteases.

Miscellaneous databases

GenomeRNAii645836.
PROiPR:A6NCW0.

Family and domain databases

InterProiView protein in InterPro
IPR001394. Peptidase_C19_UCH.
IPR018200. USP_CS.
IPR028889. USP_dom.
PfamiView protein in Pfam
PF00443. UCH. 1 hit.
PROSITEiView protein in PROSITE
PS00973. USP_2. 1 hit.
PS50235. USP_3. 1 hit.
ProtoNetiSearch...

Entry informationi

Entry nameiU17L3_HUMAN
AccessioniPrimary (citable) accession number: A6NCW0
Entry historyiIntegrated into UniProtKB/Swiss-Prot: April 29, 2008
Last sequence update: July 24, 2007
Last modified: June 7, 2017
This is version 85 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program
DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.

Miscellaneousi

Caution

The RS447 megasatellite DNA is a highly polymorphic conserved tandem repetitive sequence which contains a copy of the USP17 gene. It is present with an interindividual variation in copy number, ranging from 20 to 103, and can be found in the genome both on chromosome 4 and chromosome 8. The high similarity between the UPS17-like genes makes impossible to clearly assign data to one of the genes of the family. Oligonucleotides designed in RNAi experiments are for instance not specific of a given UPS17-like gene.Curated

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Human chromosome 8
    Human chromosome 8: entries, gene names and cross-references to MIM
  2. Peptidase families
    Classification of peptidase families and list of entries
  3. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.