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Protein

Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta, chloroplastic

Gene

accD

Organism
Buxus microphylla (Littleleaf boxwood) (Japanese boxwood)
Status
Reviewed-Annotation score: Annotation score: 3 out of 5-Protein inferred from homologyi

Functioni

Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO2 group is transferred by the transcarboxylase to acetyl-CoA to form malonyl-CoA.UniRule annotation

Catalytic activityi

ATP + acetyl-CoA + HCO3- = ADP + phosphate + malonyl-CoA.UniRule annotation

Cofactori

Zn2+UniRule annotationNote: Binds 1 zinc ion per subunit.UniRule annotation

Pathwayi: malonyl-CoA biosynthesis

This protein is involved in step 1 of the subpathway that synthesizes malonyl-CoA from acetyl-CoA.UniRule annotation
Proteins known to be involved in this subpathway in this organism are:
  1. Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta, chloroplastic (accD)
This subpathway is part of the pathway malonyl-CoA biosynthesis, which is itself part of Lipid metabolism.
View all proteins of this organism that are known to be involved in the subpathway that synthesizes malonyl-CoA from acetyl-CoA, the pathway malonyl-CoA biosynthesis and in Lipid metabolism.

Sites

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Metal bindingi226ZincUniRule annotation1
Metal bindingi229ZincUniRule annotation1
Metal bindingi245ZincUniRule annotation1
Metal bindingi248ZincUniRule annotation1

Regions

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Zinc fingeri226 – 248C4-typeUniRule annotationAdd BLAST23

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionLigase
Biological processFatty acid biosynthesis, Fatty acid metabolism, Lipid biosynthesis, Lipid metabolism
LigandATP-binding, Metal-binding, Nucleotide-binding, Zinc

Enzyme and pathway databases

UniPathwayiUPA00655; UER00711.

Names & Taxonomyi

Protein namesi
Recommended name:
Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta, chloroplasticUniRule annotation (EC:6.4.1.2UniRule annotation)
Short name:
ACCase subunit betaUniRule annotation
Short name:
Acetyl-CoA carboxylase carboxyltransferase subunit betaUniRule annotation
Gene namesi
Name:accDUniRule annotation
Encoded oniPlastid; Chloroplast
OrganismiBuxus microphylla (Littleleaf boxwood) (Japanese boxwood)
Taxonomic identifieri153571 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsBuxalesBuxaceaeBuxus

Subcellular locationi

  • Plastidchloroplast stroma UniRule annotation

GO - Cellular componenti

Keywords - Cellular componenti

Chloroplast, Plastid

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00003591241 – 489Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta, chloroplasticAdd BLAST489

Interactioni

Subunit structurei

Acetyl-CoA carboxylase is a heterohexamer composed of biotin carboxyl carrier protein, biotin carboxylase and 2 subunits each of ACCase subunit alpha and ACCase plastid-coded subunit beta (accD).By similarity

Structurei

3D structure databases

SMRiA6MM45.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini222 – 489CoA carboxyltransferase N-terminalPROSITE-ProRule annotationAdd BLAST268

Sequence similaritiesi

Belongs to the AccD/PCCB family.UniRule annotation

Zinc finger

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Zinc fingeri226 – 248C4-typeUniRule annotationAdd BLAST23

Keywords - Domaini

Zinc-finger

Family and domain databases

HAMAPiMF_01395. AcetylCoA_CT_beta. 1 hit.
InterProiView protein in InterPro
IPR034733. AcCoA_carboxyl.
IPR000438. Acetyl_CoA_COase_Trfase_b_su.
IPR029045. ClpP/crotonase-like_dom.
IPR011762. COA_CT_N.
PfamiView protein in Pfam
PF01039. Carboxyl_trans. 1 hit.
PRINTSiPR01070. ACCCTRFRASEB.
SUPFAMiSSF52096. SSF52096. 1 hit.
TIGRFAMsiTIGR00515. accD. 1 hit.
PROSITEiView protein in PROSITE
PS50980. COA_CT_NTER. 1 hit.

Sequencei

Sequence statusi: Complete.

A6MM45-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MEKWWFNSML SNEELEHACG LSKSMESLGP IGNTSGGEDH IINNMDKNIH
60 70 80 90 100
SWGDSGSSSC SNVYPLFGVR GIQGFISDDT FLVRDSNGDS YSIYFDIENK
110 120 130 140 150
IFEIDNDHSF LSELESSFSS YQNNGSNSDN PYYDRYIYDT KYSWNNYINS
160 170 180 190 200
CIDSYLRSEI RIDSYILSGS DNYSDSYIYS YICSECVNSS ESSSIKTSTN
210 220 230 240 250
GSDLNIRGRY NDLDLNKKYR HLWVQCENCY GLNYKKFFRS KMNICEQCGY
260 270 280 290 300
HLKMSSSDRI ELSIDTGTWD PMDEDMVSMD PIEFHSEEEL YKDRINSYQR
310 320 330 340 350
KTGLTEAVQT GIGQLNGIPI AIGVMDFQFM GGSMGSVVGE KITRLIEYAT
360 370 380 390 400
NRSLPVIIVC ASGGARMQEG SLSLMQMAKI SSASYNYQSN KKLFYVSILT
410 420 430 440 450
SPTTGGVTAS FGMLGDIIIA EPNAYIAFAG KRVIEQTLNK TVPDGSQTAE
460 470 480
YLFHKGLFDP IVPRNLLKGV LSELFQLHGF FPLNSNSIK
Length:489
Mass (Da):54,988
Last modified:January 20, 2009 - v2
Checksum:iCFFFFF607EBCD7E5
GO

Sequence cautioni

The sequence ABQ45258 differs from that shown. Reason: Erroneous initiation. Translation N-terminally shortened.Curated

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
EF380351 Genomic DNA. Translation: ABQ45258.1. Different initiation.
RefSeqiYP_001294193.1. NC_009599.1.

Genome annotation databases

GeneIDi5236876.

Similar proteinsi

Entry informationi

Entry nameiACCD_BUXMI
AccessioniPrimary (citable) accession number: A6MM45
Entry historyiIntegrated into UniProtKB/Swiss-Prot: January 20, 2009
Last sequence update: January 20, 2009
Last modified: May 10, 2017
This is version 41 of the entry and version 2 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programPlant Protein Annotation Program

Miscellaneousi

Documents

  1. PATHWAY comments
    Index of metabolic and biosynthesis pathways
  2. SIMILARITY comments
    Index of protein domains and families