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A6M332 (A6M332_CLOB8) Unreviewed, UniProtKB/TrEMBL

Last modified December 14, 2011. Version 26. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesSubmitted name:
Alpha amylase, catalytic region EMBL ABR37012.1
Gene names
Ordered Locus Names:Cbei_4906
OrganismClostridium beijerinckii (strain ATCC 51743 / NCIMB 8052) (Clostridium acetobutylicum) [Complete proteome] [HAMAP] EMBL ABR37012.1
Taxonomic identifier290402 [NCBI]
Taxonomic lineageBacteria › Firmicutes › Clostridia › Clostridiales › Clostridiaceae › Clostridium

Protein attributes

Sequence length608 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Keywords
   Technical termComplete proteome
Gene Ontology (GO)
   Biological processcarbohydrate metabolic process

Inferred from electronic annotation. Source: InterPro

   Molecular functioncatalytic activity

Inferred from electronic annotation. Source: InterPro

cation binding

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
A6M332 [UniParc].

Last modified July 24, 2007. Version 1.
Checksum: 7076DC4C53790BE7

FASTA60870,632
        10         20         30         40         50         60 
MNDIQVLHDS QSIRFRRPFG AVEAGQKVKI SININKDIIV AIELIKFDGT KMNMGMNKEY 

        70         80         90        100        110        120 
LNNGEFKYSV EIDTSDALGI LEYYFILIDG YDRVYYGNND NHLGGVGQIY TYNPVPYQIT 

       130        140        150        160        170        180 
VYEKSFVPRW YKEGVIYHIL IDRFYNGNEN KIIDNIKGNS FIYGRWDDSP MYIRDSFGKI 

       190        200        210        220        230        240 
ARWDFYGGNL KGIIKKLDYI KELGANIIKL SPIFKSPSCH KYDTADYEIV DEMFGTNGEF 

       250        260        270        280        290        300 
RELCKVANSK GIKIILDIVL SYTSSDSKYF NKLGNYDDVG AYNSPNSRFY DWYKFITYPY 

       310        320        330        340        350        360 
RYESWWGMDD RPNVNSMQKE YVDYIISGDN SIINKWTDMG VSGWFLNVTD ELPDEFIELI 

       370        380        390        400        410        420 
RKKIGEINKD TVLLGDIWED ASNKISYSRR RKYLQGNEVQ AATNYPLRES LINFIKGYIK 

       430        440        450        460        470        480 
SDKLRQKIMS LYENYPRESF YGNINILGTN DTERILTVLD ENISLLKLLI AIQFTLPGVP 

       490        500        510        520        530        540 
LIYYGDEAGI KGGREPDNRR SYPWGKENKM LADFYHKIIK IRNNEDGLKK GKLSIFETDP 

       550        560        570        580        590        600 
NVFAFERKYE NESVIVLVNV SSKAKLIKEI NLSGDYVNLL DISEKYKFAG SDSVITIFPY 


DLKILRRI

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References

[1]"Complete sequence of Clostridium beijerinckii NCIMB 8052."
Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina del Rio T., Hammon N., Israni S., Dalin E., Tice H., Pitluck S., Sims D., Brettin T., Bruce D., Tapia R., Brainard J., Schmutz J., Larimer F. expand/collapse author list , Land M., Hauser L., Kyrpides N., Mikhailova N., Bennet G., Cann I., Chen J.-S., Contreras A.L., Jones D., Kashket E., Mitchell W., Stoddard S., Schwarz W., Qureshi N., Young M., Shi Z., Ezeji T., White B., Blaschek H., Richardson P.
Submitted (JUN-2007) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC 51743 / NCIMB 8052.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CP000721 Genomic DNA. Translation: ABR37012.1.
RefSeqYP_001311968.1. NC_009617.1.

3D structure databases

ProteinModelPortalA6M332.
ModBaseSearch...

Protein-protein interaction databases

STRINGA6M332.

Protein family/group databases

CAZyCBM34. Carbohydrate-Binding Module Family 34.
GH13. Glycoside Hydrolase Family 13.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID5296058.
GenomeReviewsGene locus Cbei_4906 in contig CP000721_GR.
KEGGcbe:Cbei_4906.
PATRIC19354186. VBICloBei69853_5094.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0366.
HOGENOMHBG304832.
OMAFNNIGSH.
ProtClustDBCLSK899118.

Family and domain databases

InterProIPR015902. Alpha_amylase.
IPR013780. Glyco_hydro_13_b.
IPR006047. Glyco_hydro_13_cat_dom.
IPR006589. Glyco_hydro_13_sub_cat_dom.
IPR013781. Glyco_hydro_subgr_catalytic.
IPR017853. Glycoside_hydrolase_SF.
IPR013783. Ig-like_fold.
IPR014756. Ig_E-set.
[Graphical view]
Gene3DG3DSA:2.60.40.1180. Glyco_hydro_13_b. 1 hit.
G3DSA:3.20.20.80. Glyco_hydro_cat. 1 hit.
G3DSA:2.60.40.10. Ig-like_fold. 1 hit.
PANTHERPTHR10357. Alpha_amylase. 1 hit.
PfamPF00128. Alpha-amylase. 1 hit.
[Graphical view]
SMARTSM00642. Aamy. 1 hit.
[Graphical view]
SUPFAMSSF51445. Glyco_hydro_cat. 1 hit.
SSF81296. Ig_E-set. 1 hit.
ProtoNetSearch...

Entry information

Entry nameA6M332_CLOB8
AccessionPrimary (citable) accession number: A6M332
Entry history
Integrated into UniProtKB/TrEMBL: July 24, 2007
Last sequence update: July 24, 2007
Last modified: December 14, 2011
This is version 26 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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